RNA–Protein interactions for RNA: ENST00000641476.1

SRRT-219, Transcript of serrate, RNA effector molecule, humanhuman

Gene SRRT, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-219ENST00000641476 COG3Q96JB2 828 aa20.47■□□□□ 0.87
SRRT-219ENST00000641476 TFCP2L1Q9NZI6 479 aa20.47■□□□□ 0.87
SRRT-219ENST00000641476 CLSPNQ9HAW4 1339 aa20.46■□□□□ 0.87
SRRT-219ENST00000641476 RGPD2P0DJD1 1756 aa20.46■□□□□ 0.87
SRRT-219ENST00000641476 CEP350Q5VT06 3117 aa20.46■□□□□ 0.87
SRRT-219ENST00000641476 KCNQ4P56696 695 aa20.45■□□□□ 0.86
SRRT-219ENST00000641476 SLC27A3Q5K4L6 730 aa20.45■□□□□ 0.86
SRRT-219ENST00000641476 MAP3K19Q56UN5 1328 aa20.45■□□□□ 0.86
SRRT-219ENST00000641476 RTL1A6NKG5 1358 aa20.45■□□□□ 0.86
SRRT-219ENST00000641476 SHANK3Q9BYB0 1731 aa20.44■□□□□ 0.86
SRRT-219ENST00000641476 DDX54Q8TDD1 881 aaKnown RBP20.44■□□□□ 0.86
SRRT-219ENST00000641476 IP6K1Q92551 441 aa20.44■□□□□ 0.86
SRRT-219ENST00000641476 YBX3P16989 372 aaKnown RBP eCLIP20.43■□□□□ 0.86
SRRT-219ENST00000641476 SYTL4Q96C24 671 aaPredicted RBP20.43■□□□□ 0.86
SRRT-219ENST00000641476 HOXC9P31274 260 aa20.41■□□□□ 0.86
SRRT-219ENST00000641476 PCGF6Q9BYE7 350 aa20.41■□□□□ 0.86
SRRT-219ENST00000641476 TIMELESSQ9UNS1 1208 aa20.41■□□□□ 0.86
SRRT-219ENST00000641476 GRIN3BO60391 1043 aa20.4■□□□□ 0.86
SRRT-219ENST00000641476 CDCA8Q53HL2 280 aa20.4■□□□□ 0.86
SRRT-219ENST00000641476 LTV1Q96GA3 475 aaPredicted RBP20.4■□□□□ 0.86
SRRT-219ENST00000641476 DOT1LQ8TEK3 1739 aa20.39■□□□□ 0.86
SRRT-219ENST00000641476 FBLN1P23142 703 aa20.39■□□□□ 0.85
SRRT-219ENST00000641476 GGNBP2Q9H3C7 697 aa20.39■□□□□ 0.85
SRRT-219ENST00000641476 MEGF6O75095 1541 aa20.38■□□□□ 0.85
SRRT-219ENST00000641476 NSD3Q9BZ95 1437 aa20.38■□□□□ 0.85
SRRT-219ENST00000641476 FYB1O15117 783 aa20.38■□□□□ 0.85
SRRT-219ENST00000641476 MSH5O43196 834 aa20.38■□□□□ 0.85
SRRT-219ENST00000641476 AMPHP49418 695 aa20.38■□□□□ 0.85
SRRT-219ENST00000641476 ANKRD26Q9UPS8 1709 aa20.38■□□□□ 0.85
SRRT-219ENST00000641476 ATP10DQ9P241 1426 aa20.37■□□□□ 0.85
SRRT-219ENST00000641476 PRIM1P49642 420 aaKnown RBP20.37■□□□□ 0.85
SRRT-219ENST00000641476 RRS1Q15050 365 aaKnown RBP20.37■□□□□ 0.85
SRRT-219ENST00000641476 QSER1Q2KHR3 1735 aa20.36■□□□□ 0.85
SRRT-219ENST00000641476 SMG6Q86US8 1419 aaKnown RBP20.36■□□□□ 0.85
SRRT-219ENST00000641476 MSL1Q68DK7 614 aa20.35■□□□□ 0.85
SRRT-219ENST00000641476 CCNL1Q9UK58 526 aaPredicted RBP20.35■□□□□ 0.85
SRRT-219ENST00000641476 COL24A1Q17RW2 1714 aa20.35■□□□□ 0.85
SRRT-219ENST00000641476 NSD2O96028 1365 aa20.34■□□□□ 0.85
SRRT-219ENST00000641476 GPBP1L1Q9HC44 474 aaPredicted RBP20.33■□□□□ 0.85
SRRT-219ENST00000641476 FLT4P35916 1363 aa20.33■□□□□ 0.84
SRRT-219ENST00000641476 TUBGCP6Q96RT7 1819 aa20.32■□□□□ 0.84
SRRT-219ENST00000641476 COL23A1Q86Y22 540 aaPredicted RBP20.32■□□□□ 0.84
SRRT-219ENST00000641476 ZNF526Q8TF50 670 aaPredicted RBP20.31■□□□□ 0.84
SRRT-219ENST00000641476 CARD14Q9BXL6 1004 aa20.31■□□□□ 0.84
SRRT-219ENST00000641476 KAT6BQ8WYB5 2073 aa20.31■□□□□ 0.84
SRRT-219ENST00000641476 KIF24Q5T7B8 1368 aa20.31■□□□□ 0.84
SRRT-219ENST00000641476 INSRP06213 1382 aa20.3■□□□□ 0.84
SRRT-219ENST00000641476 LY75O60449 1722 aa20.28■□□□□ 0.84
SRRT-219ENST00000641476 HSPA6P17066 643 aa20.28■□□□□ 0.84
SRRT-219ENST00000641476 NBPF6Q5VWK0 638 aa20.28■□□□□ 0.84
SRRT-219ENST00000641476 USHBP1Q8N6Y0 703 aa20.28■□□□□ 0.84
SRRT-219ENST00000641476 NBPF4Q96M43 638 aa20.28■□□□□ 0.84
SRRT-219ENST00000641476 PKD1L3Q7Z443 1732 aa20.27■□□□□ 0.84
SRRT-219ENST00000641476 ZCRB1Q8TBF4 217 aaKnown RBP20.27■□□□□ 0.84
SRRT-219ENST00000641476 HSP90AB2PQ58FF8 381 aa20.26■□□□□ 0.83
SRRT-219ENST00000641476 CD2APQ9Y5K6 639 aa20.26■□□□□ 0.83
SRRT-219ENST00000641476 ADCY9O60503 1353 aa20.25■□□□□ 0.83
SRRT-219ENST00000641476 EMILIN1Q9Y6C2 1016 aa20.25■□□□□ 0.83
SRRT-219ENST00000641476 NCAPD2Q15021 1401 aa20.25■□□□□ 0.83
SRRT-219ENST00000641476 CCER1Q8TC90 406 aaPredicted RBP20.24■□□□□ 0.83
SRRT-219ENST00000641476 WWC3Q9ULE0 1092 aa20.24■□□□□ 0.83
SRRT-219ENST00000641476 MAP2P11137 1827 aaKnown RBP20.24■□□□□ 0.83
SRRT-219ENST00000641476 TOGARAM1Q9Y4F4 1720 aa20.24■□□□□ 0.83
SRRT-219ENST00000641476 CGNL1Q0VF96 1302 aa20.24■□□□□ 0.83
SRRT-219ENST00000641476 POLR3GLQ9BT43 218 aa20.23■□□□□ 0.83
SRRT-219ENST00000641476 RAPGEF4Q8WZA2 1011 aa20.22■□□□□ 0.83
SRRT-219ENST00000641476 HSPA5P11021 654 aaKnown RBP20.21■□□□□ 0.83
SRRT-219ENST00000641476 EIF4G2P78344 907 aaKnown RBP eCLIP20.21■□□□□ 0.83
SRRT-219ENST00000641476 PCDH11XQ9BZA7 1347 aa20.2■□□□□ 0.82
SRRT-219ENST00000641476 PCDH11YQ9BZA8 1340 aa20.2■□□□□ 0.82
SRRT-219ENST00000641476 TATP17735 454 aaPredicted RBP20.19■□□□□ 0.82
SRRT-219ENST00000641476 FLAD1Q8NFF5 587 aa20.19■□□□□ 0.82
SRRT-219ENST00000641476 IGSF1Q8N6C5 1336 aa20.19■□□□□ 0.82
SRRT-219ENST00000641476 PALLDQ8WX93 1383 aa20.18■□□□□ 0.82
SRRT-219ENST00000641476 C5P01031 1676 aa20.17■□□□□ 0.82
SRRT-219ENST00000641476 ITGB4P16144 1822 aa20.16■□□□□ 0.82
SRRT-219ENST00000641476 PPM1GO15355 546 aaPredicted RBP20.16■□□□□ 0.82
SRRT-219ENST00000641476 PHF14O94880 888 aa20.16■□□□□ 0.82
SRRT-219ENST00000641476 MPRIPQ6WCQ1 1025 aa20.15■□□□□ 0.82
SRRT-219ENST00000641476 AK7Q96M32 723 aa20.15■□□□□ 0.82
SRRT-219ENST00000641476 WASHC2AQ641Q2 1341 aa20.15■□□□□ 0.82
SRRT-219ENST00000641476 KIF3CO14782 793 aa20.14■□□□□ 0.81
SRRT-219ENST00000641476 AMIGO3Q86WK7 504 aa20.14■□□□□ 0.81
SRRT-219ENST00000641476 SMIM5Q71RC9 77 aa20.13■□□□□ 0.81
SRRT-219ENST00000641476 POLKQ9UBT6 870 aa20.13■□□□□ 0.81
SRRT-219ENST00000641476 TAF1LQ8IZX4 1826 aa20.12■□□□□ 0.81
SRRT-219ENST00000641476 CYP27B1O15528 508 aa20.12■□□□□ 0.81
SRRT-219ENST00000641476 HMGB2P26583 209 aaKnown RBP20.12■□□□□ 0.81
SRRT-219ENST00000641476 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.11■□□□□ 0.81
SRRT-219ENST00000641476 TNNT2P45379 298 aaPredicted RBP20.1■□□□□ 0.81
SRRT-219ENST00000641476 EYA1Q99502 592 aa20.1■□□□□ 0.81
SRRT-219ENST00000641476 PANK3Q9H999 370 aa20.1■□□□□ 0.81
SRRT-219ENST00000641476 APLP1P51693 650 aa20.09■□□□□ 0.81
SRRT-219ENST00000641476 C4BP0C0L5 1744 aa20.09■□□□□ 0.81
SRRT-219ENST00000641476 SMARCC1Q92922 1105 aaPredicted RBP20.08■□□□□ 0.81
SRRT-219ENST00000641476 EIF4A2Q14240 407 aaKnown RBP20.07■□□□□ 0.8
SRRT-219ENST00000641476 PLEKHG2Q9H7P9 1386 aa20.07■□□□□ 0.8
SRRT-219ENST00000641476 SSFA2P28290 1259 aa20.05■□□□□ 0.8
SRRT-219ENST00000641476 SPG7Q9UQ90 795 aa20.05■□□□□ 0.8
SRRT-219ENST00000641476 LINC00116Q8NCU8 138 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms