RNA–Protein interactions for RNA: ENST00000641421.1

CASC19-230, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,530 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-230ENST00000641421 TMEM94Q12767 1356 aa13.54□□□□□ -0.24
CASC19-230ENST00000641421 ZBTB7CA1YPR0 619 aa13.54□□□□□ -0.24
CASC19-230ENST00000641421 ATF3P18847 181 aa13.54□□□□□ -0.24
CASC19-230ENST00000641421 FAM161AQ3B820 660 aa13.54□□□□□ -0.24
CASC19-230ENST00000641421 CHMP4BQ9H444 224 aaKnown RBP13.54□□□□□ -0.24
CASC19-230ENST00000641421 NCOA3Q9Y6Q9 1424 aa13.53□□□□□ -0.24
CASC19-230ENST00000641421 API5Q9BZZ5 524 aaKnown RBP13.53□□□□□ -0.24
CASC19-230ENST00000641421 ZBTB40Q9NUA8 1239 aa13.53□□□□□ -0.24
CASC19-230ENST00000641421 SLIT3O75094 1523 aa13.53□□□□□ -0.24
CASC19-230ENST00000641421 GNAT3A8MTJ3 354 aa13.52□□□□□ -0.25
CASC19-230ENST00000641421 GCP02774 474 aa13.52□□□□□ -0.25
CASC19-230ENST00000641421 HDAC1Q13547 482 aaPredicted RBP13.52□□□□□ -0.25
CASC19-230ENST00000641421 LMOD2Q6P5Q4 547 aa13.52□□□□□ -0.25
CASC19-230ENST00000641421 PDZRN3Q9UPQ7 1066 aa13.52□□□□□ -0.25
CASC19-230ENST00000641421 DCCP43146 1447 aa13.52□□□□□ -0.25
CASC19-230ENST00000641421 USP19O94966 1318 aa13.52□□□□□ -0.25
CASC19-230ENST00000641421 TRPM3Q9HCF6 1732 aaPredicted RBP13.51□□□□□ -0.25
CASC19-230ENST00000641421 PHRF1Q9P1Y6 1649 aaKnown RBP13.51□□□□□ -0.25
CASC19-230ENST00000641421 USHBP1Q8N6Y0 703 aa13.51□□□□□ -0.25
CASC19-230ENST00000641421 TSPYL4Q9UJ04 414 aa13.51□□□□□ -0.25
CASC19-230ENST00000641421 ABCC4O15439 1325 aa13.51□□□□□ -0.25
CASC19-230ENST00000641421 MAP3K5Q99683 1374 aa13.51□□□□□ -0.25
CASC19-230ENST00000641421 HSPA2P54652 639 aa13.5□□□□□ -0.25
CASC19-230ENST00000641421 MST1RQ04912 1400 aa13.5□□□□□ -0.25
CASC19-230ENST00000641421 KRT24Q2M2I5 525 aa13.5□□□□□ -0.25
CASC19-230ENST00000641421 ERICH6Q7L0X2 663 aa13.5□□□□□ -0.25
CASC19-230ENST00000641421 NPM2Q86SE8 214 aaKnown RBP13.5□□□□□ -0.25
CASC19-230ENST00000641421 ARHGEF25Q86VW2 580 aa13.5□□□□□ -0.25
CASC19-230ENST00000641421 MSH6P52701 1360 aa13.5□□□□□ -0.25
CASC19-230ENST00000641421 STRCP1A6NGW2 1772 aa13.49□□□□□ -0.25
CASC19-230ENST00000641421 C8orf34Q49A92 452 aa13.49□□□□□ -0.25
CASC19-230ENST00000641421 NBPF6Q5VWK0 638 aa13.49□□□□□ -0.25
CASC19-230ENST00000641421 NBPF4Q96M43 638 aa13.49□□□□□ -0.25
CASC19-230ENST00000641421 IPO9Q96P70 1041 aaKnown RBP13.49□□□□□ -0.25
CASC19-230ENST00000641421 MIS18AQ9NYP9 233 aa13.49□□□□□ -0.25
CASC19-230ENST00000641421 LRRC37A3O60309 1634 aa13.49□□□□□ -0.25
CASC19-230ENST00000641421 ZBTB7BO15156 539 aaPredicted RBP13.48□□□□□ -0.25
CASC19-230ENST00000641421 PLEKHG5O94827 1062 aa13.48□□□□□ -0.25
CASC19-230ENST00000641421 CADPS2Q86UW7 1296 aa13.48□□□□□ -0.25
CASC19-230ENST00000641421 IL17REQ8NFR9 667 aa13.47□□□□□ -0.25
CASC19-230ENST00000641421 BABAM1Q9NWV8 329 aa13.47□□□□□ -0.25
CASC19-230ENST00000641421 TAF7Q15545 349 aaPredicted RBP13.46□□□□□ -0.25
CASC19-230ENST00000641421 SMC5Q8IY18 1101 aa13.46□□□□□ -0.25
CASC19-230ENST00000641421 LRRC59Q96AG4 307 aaKnown RBP13.46□□□□□ -0.25
CASC19-230ENST00000641421 ANP32EQ9BTT0 268 aa13.46□□□□□ -0.25
CASC19-230ENST00000641421 PTPRCP08575 1304 aa13.46□□□□□ -0.25
CASC19-230ENST00000641421 ALS2Q96Q42 1657 aa13.45□□□□□ -0.26
CASC19-230ENST00000641421 ANKRD24Q8TF21 1146 aa13.45□□□□□ -0.26
CASC19-230ENST00000641421 NOP58Q9Y2X3 529 aaKnown RBP13.45□□□□□ -0.26
CASC19-230ENST00000641421 PLEKHO1Q53GL0 409 aaPredicted RBP13.44□□□□□ -0.26
CASC19-230ENST00000641421 INTS3Q68E01 1043 aaKnown RBP13.44□□□□□ -0.26
CASC19-230ENST00000641421 NPHP3Q7Z494 1330 aa13.44□□□□□ -0.26
CASC19-230ENST00000641421 ZBTB47Q9UFB7 747 aaPredicted RBP13.44□□□□□ -0.26
CASC19-230ENST00000641421 SOS1Q07889 1333 aaPredicted RBP13.44□□□□□ -0.26
CASC19-230ENST00000641421 NCAPD2Q15021 1401 aa13.44□□□□□ -0.26
CASC19-230ENST00000641421 RGPD2P0DJD1 1756 aa13.43□□□□□ -0.26
CASC19-230ENST00000641421 MED1Q15648 1581 aaPredicted RBP13.43□□□□□ -0.26
CASC19-230ENST00000641421 LMTK3Q96Q04 1460 aa13.43□□□□□ -0.26
CASC19-230ENST00000641421 RGS12O14924 1447 aa13.43□□□□□ -0.26
CASC19-230ENST00000641421 KDM4FA0A1W2PPD8 638 aa13.43□□□□□ -0.26
CASC19-230ENST00000641421 SLC4A2P04920 1241 aa13.43□□□□□ -0.26
CASC19-230ENST00000641421 AMOTQ4VCS5 1084 aa13.43□□□□□ -0.26
CASC19-230ENST00000641421 ZNF530Q6P9A1 599 aaPredicted RBP13.43□□□□□ -0.26
CASC19-230ENST00000641421 DDX17Q92841 729 aaKnown RBP13.43□□□□□ -0.26
CASC19-230ENST00000641421 CEMIPQ8WUJ3 1361 aa13.42□□□□□ -0.26
CASC19-230ENST00000641421 ZC3H6P61129 1189 aaKnown RBP13.42□□□□□ -0.26
CASC19-230ENST00000641421 AKAP4Q5JQC9 854 aa13.42□□□□□ -0.26
CASC19-230ENST00000641421 DDRGK1Q96HY6 314 aa13.42□□□□□ -0.26
CASC19-230ENST00000641421 STK31Q9BXU1 1019 aa13.42□□□□□ -0.26
CASC19-230ENST00000641421 C1orf115Q9H7X2 142 aa13.42□□□□□ -0.26
CASC19-230ENST00000641421 TNS3Q68CZ2 1445 aa13.41□□□□□ -0.26
CASC19-230ENST00000641421 CCDC30Q5VVM6 783 aa13.41□□□□□ -0.26
CASC19-230ENST00000641421 AXIN2Q9Y2T1 843 aa13.41□□□□□ -0.26
CASC19-230ENST00000641421 CAMTA1Q9Y6Y1 1673 aa13.4□□□□□ -0.26
CASC19-230ENST00000641421 NUCB1Q02818 461 aa13.4□□□□□ -0.26
CASC19-230ENST00000641421 GCC1Q96CN9 775 aa13.4□□□□□ -0.26
CASC19-230ENST00000641421 VIRMAQ69YN4 1812 aaKnown RBP13.4□□□□□ -0.26
CASC19-230ENST00000641421 LMO7Q8WWI1 1683 aa13.4□□□□□ -0.26
CASC19-230ENST00000641421 C1orf141Q5JVX7 400 aa13.39□□□□□ -0.27
CASC19-230ENST00000641421 G2E3Q7L622 706 aa13.39□□□□□ -0.27
CASC19-230ENST00000641421 LGR6Q9HBX8 967 aa13.39□□□□□ -0.27
CASC19-230ENST00000641421 SPATA31A3Q5VYP0 1347 aa13.39□□□□□ -0.27
CASC19-230ENST00000641421 STRCQ7RTU9 1775 aa13.39□□□□□ -0.27
CASC19-230ENST00000641421 PXDNQ92626 1479 aa13.38□□□□□ -0.27
CASC19-230ENST00000641421 ERBB3P21860 1342 aa13.38□□□□□ -0.27
CASC19-230ENST00000641421 RNMTO43148 476 aaKnown RBP13.38□□□□□ -0.27
CASC19-230ENST00000641421 TEFQ10587 303 aa13.38□□□□□ -0.27
CASC19-230ENST00000641421 CHD1LQ86WJ1 897 aa13.38□□□□□ -0.27
CASC19-230ENST00000641421 SIRT2Q8IXJ6 389 aa13.38□□□□□ -0.27
CASC19-230ENST00000641421 XIRP1Q702N8 1843 aaKnown RBP13.38□□□□□ -0.27
CASC19-230ENST00000641421 CCT4P50991 539 aaKnown RBP13.37□□□□□ -0.27
CASC19-230ENST00000641421 MPRIPQ6WCQ1 1025 aa13.37□□□□□ -0.27
CASC19-230ENST00000641421 NECTIN2Q92692 538 aa13.37□□□□□ -0.27
CASC19-230ENST00000641421 OVOS2A0A0G2JMS6 1433 aa13.37□□□□□ -0.27
CASC19-230ENST00000641421 FAM208AQ9UK61 1670 aaKnown RBP13.36□□□□□ -0.27
CASC19-230ENST00000641421 RGPD5Q99666 1765 aa13.36□□□□□ -0.27
CASC19-230ENST00000641421 EIF4A1P60842 406 aaKnown RBP13.36□□□□□ -0.27
CASC19-230ENST00000641421 FLIIQ13045 1269 aa13.36□□□□□ -0.27
CASC19-230ENST00000641421 ANKRD45Q5TZF3 282 aa13.36□□□□□ -0.27
CASC19-230ENST00000641421 BRINP3Q76B58 766 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms