RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 LY75O60449 1722 aa12□□□□□ -0.49
SCARB2-226ENST00000640916 KCNQ4P56696 695 aa11.99□□□□□ -0.49
SCARB2-226ENST00000640916 NFAT5O94916 1531 aa11.99□□□□□ -0.49
SCARB2-226ENST00000640916 CCDC7Q96M83 1385 aa11.98□□□□□ -0.49
SCARB2-226ENST00000640916 SLC27A3Q5K4L6 730 aa11.97□□□□□ -0.49
SCARB2-226ENST00000640916 CSB-PGBD3P0DP91 1061 aa11.96□□□□□ -0.49
SCARB2-226ENST00000640916 APLP1P51693 650 aa11.96□□□□□ -0.49
SCARB2-226ENST00000640916 COL23A1Q86Y22 540 aaPredicted RBP11.96□□□□□ -0.49
SCARB2-226ENST00000640916 CABP2Q9NPB3 220 aa11.96□□□□□ -0.49
SCARB2-226ENST00000640916 TFCP2L1Q9NZI6 479 aa11.96□□□□□ -0.49
SCARB2-226ENST00000640916 CABP1Q9NZU7 370 aa11.96□□□□□ -0.49
SCARB2-226ENST00000640916 QRICH2Q9H0J4 1663 aa11.96□□□□□ -0.5
SCARB2-226ENST00000640916 WDR90Q96KV7 1748 aa11.95□□□□□ -0.5
SCARB2-226ENST00000640916 ZNF692Q9BU19 519 aaPredicted RBP11.95□□□□□ -0.5
SCARB2-226ENST00000640916 PCNTO95613 3336 aa11.95□□□□□ -0.5
SCARB2-226ENST00000640916 STAC3Q96MF2 364 aa11.94□□□□□ -0.5
SCARB2-226ENST00000640916 KIAA1210Q9ULL0 1709 aa11.94□□□□□ -0.5
SCARB2-226ENST00000640916 NSD2O96028 1365 aa11.93□□□□□ -0.5
SCARB2-226ENST00000640916 PRELPP51888 382 aa11.93□□□□□ -0.5
SCARB2-226ENST00000640916 SRPK2P78362 688 aaKnown RBP11.93□□□□□ -0.5
SCARB2-226ENST00000640916 CD2APQ9Y5K6 639 aa11.93□□□□□ -0.5
SCARB2-226ENST00000640916 SOX12O15370 315 aa11.92□□□□□ -0.5
SCARB2-226ENST00000640916 IL2RBP14784 551 aa11.92□□□□□ -0.5
SCARB2-226ENST00000640916 MSL1Q68DK7 614 aa11.92□□□□□ -0.5
SCARB2-226ENST00000640916 JMYQ8N9B5 988 aa11.92□□□□□ -0.5
SCARB2-226ENST00000640916 KCNH5Q8NCM2 988 aa11.92□□□□□ -0.5
SCARB2-226ENST00000640916 DOT1LQ8TEK3 1739 aa11.91□□□□□ -0.5
SCARB2-226ENST00000640916 ERBB3P21860 1342 aa11.91□□□□□ -0.5
SCARB2-226ENST00000640916 TTC21BQ7Z4L5 1316 aa11.91□□□□□ -0.5
SCARB2-226ENST00000640916 NBPF1Q3BBV0 1214 aa11.91□□□□□ -0.5
SCARB2-226ENST00000640916 LTN1O94822 1766 aa11.91□□□□□ -0.5
SCARB2-226ENST00000640916 CICQ96RK0 1608 aaPredicted RBP11.9□□□□□ -0.5
SCARB2-226ENST00000640916 TAF1LQ8IZX4 1826 aa11.9□□□□□ -0.5
SCARB2-226ENST00000640916 USP54Q70EL1 1684 aa11.9□□□□□ -0.5
SCARB2-226ENST00000640916 TOMM70O94826 608 aa11.89□□□□□ -0.51
SCARB2-226ENST00000640916 HTRA3P83110 453 aa11.89□□□□□ -0.51
SCARB2-226ENST00000640916 NLRP2Q9NX02 1062 aa11.89□□□□□ -0.51
SCARB2-226ENST00000640916 PRIM1P49642 420 aaKnown RBP11.88□□□□□ -0.51
SCARB2-226ENST00000640916 KLRG1Q96E93 195 aa11.88□□□□□ -0.51
SCARB2-226ENST00000640916 WWC3Q9ULE0 1092 aa11.88□□□□□ -0.51
SCARB2-226ENST00000640916 TOGARAM1Q9Y4F4 1720 aa11.88□□□□□ -0.51
SCARB2-226ENST00000640916 C5P01031 1676 aa11.87□□□□□ -0.51
SCARB2-226ENST00000640916 IGSF1Q8N6C5 1336 aa11.87□□□□□ -0.51
SCARB2-226ENST00000640916 SLC34A2O95436 690 aa11.87□□□□□ -0.51
SCARB2-226ENST00000640916 TNS4Q8IZW8 715 aa11.87□□□□□ -0.51
SCARB2-226ENST00000640916 ANKRD36BQ8N2N9 1353 aa11.87□□□□□ -0.51
SCARB2-226ENST00000640916 CENPJQ9HC77 1338 aaPredicted RBP11.86□□□□□ -0.51
SCARB2-226ENST00000640916 KIAA1551Q9HCM1 1747 aa11.86□□□□□ -0.51
SCARB2-226ENST00000640916 AMIGO3Q86WK7 504 aa11.86□□□□□ -0.51
SCARB2-226ENST00000640916 DDX54Q8TDD1 881 aaKnown RBP11.86□□□□□ -0.51
SCARB2-226ENST00000640916 CCNL1Q9UK58 526 aaPredicted RBP11.86□□□□□ -0.51
SCARB2-226ENST00000640916 MON2Q7Z3U7 1717 aa11.86□□□□□ -0.51
SCARB2-226ENST00000640916 TTC21AQ8NDW8 1320 aa11.86□□□□□ -0.51
SCARB2-226ENST00000640916 NMRK2Q9NPI5 230 aa11.85□□□□□ -0.51
SCARB2-226ENST00000640916 USP31Q70CQ4 1352 aa11.84□□□□□ -0.51
SCARB2-226ENST00000640916 ANKRD24Q8TF21 1146 aa11.84□□□□□ -0.51
SCARB2-226ENST00000640916 UBR3Q6ZT12 1888 aa11.84□□□□□ -0.51
SCARB2-226ENST00000640916 RGPD2P0DJD1 1756 aa11.84□□□□□ -0.51
SCARB2-226ENST00000640916 FAM208AQ9UK61 1670 aaKnown RBP11.84□□□□□ -0.51
SCARB2-226ENST00000640916 SYTL4Q96C24 671 aaPredicted RBP11.83□□□□□ -0.52
SCARB2-226ENST00000640916 KIF13BQ9NQT8 1826 aa11.83□□□□□ -0.52
SCARB2-226ENST00000640916 RAB3GAP2Q9H2M9 1393 aa11.82□□□□□ -0.52
SCARB2-226ENST00000640916 RBM46Q8TBY0 533 aaKnown RBP11.82□□□□□ -0.52
SCARB2-226ENST00000640916 N4BP2Q86UW6 1770 aaPredicted RBP11.82□□□□□ -0.52
SCARB2-226ENST00000640916 C4BP0C0L5 1744 aa11.81□□□□□ -0.52
SCARB2-226ENST00000640916 SMIM5Q71RC9 77 aa11.81□□□□□ -0.52
SCARB2-226ENST00000640916 REM2Q8IYK8 340 aaPredicted RBP11.81□□□□□ -0.52
SCARB2-226ENST00000640916 BRCA1P38398 1863 aaKnown RBP11.8□□□□□ -0.52
SCARB2-226ENST00000640916 KTN1Q86UP2 1357 aaKnown RBP11.79□□□□□ -0.52
SCARB2-226ENST00000640916 NME9Q86XW9 330 aa11.79□□□□□ -0.52
SCARB2-226ENST00000640916 USP47Q96K76 1375 aa11.79□□□□□ -0.52
SCARB2-226ENST00000640916 PXDNLA1KZ92 1463 aa11.78□□□□□ -0.52
SCARB2-226ENST00000640916 CD163L1Q9NR16 1453 aa11.78□□□□□ -0.52
SCARB2-226ENST00000640916 MEGF6O75095 1541 aa11.78□□□□□ -0.52
SCARB2-226ENST00000640916 FLAD1Q8NFF5 587 aa11.78□□□□□ -0.52
SCARB2-226ENST00000640916 EVC2Q86UK5 1308 aa11.78□□□□□ -0.52
SCARB2-226ENST00000640916 SBNO2Q9Y2G9 1366 aa11.78□□□□□ -0.52
SCARB2-226ENST00000640916 MAP2P11137 1827 aaKnown RBP11.77□□□□□ -0.52
SCARB2-226ENST00000640916 FSTL1Q12841 308 aa11.77□□□□□ -0.53
SCARB2-226ENST00000640916 PKD1L3Q7Z443 1732 aa11.77□□□□□ -0.53
SCARB2-226ENST00000640916 ITGB4P16144 1822 aa11.76□□□□□ -0.53
SCARB2-226ENST00000640916 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.76□□□□□ -0.53
SCARB2-226ENST00000640916 ZCRB1Q8TBF4 217 aaKnown RBP11.76□□□□□ -0.53
SCARB2-226ENST00000640916 IP6K1Q92551 441 aa11.76□□□□□ -0.53
SCARB2-226ENST00000640916 ARFGEF1Q9Y6D6 1849 aa11.75□□□□□ -0.53
SCARB2-226ENST00000640916 SBF1O95248 1867 aa11.75□□□□□ -0.53
SCARB2-226ENST00000640916 HSPA1AP0DMV8 641 aaKnown RBP11.75□□□□□ -0.53
SCARB2-226ENST00000640916 HSPA1BP0DMV9 641 aaKnown RBP11.75□□□□□ -0.53
SCARB2-226ENST00000640916 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.74□□□□□ -0.53
SCARB2-226ENST00000640916 LTV1Q96GA3 475 aaPredicted RBP11.74□□□□□ -0.53
SCARB2-226ENST00000640916 PALLDQ8WX93 1383 aa11.74□□□□□ -0.53
SCARB2-226ENST00000640916 C10orf71Q711Q0 1435 aa11.74□□□□□ -0.53
SCARB2-226ENST00000640916 KCPQ6ZWJ8 1503 aa11.74□□□□□ -0.53
SCARB2-226ENST00000640916 A0A0G2JLW4 131 aa11.73□□□□□ -0.53
SCARB2-226ENST00000640916 ARHGAP27Q6ZUM4 889 aa11.73□□□□□ -0.53
SCARB2-226ENST00000640916 TNRC6CQ9HCJ0 1690 aaKnown RBP11.73□□□□□ -0.53
SCARB2-226ENST00000640916 PHF14O94880 888 aa11.72□□□□□ -0.53
SCARB2-226ENST00000640916 BCS1LQ9Y276 419 aa11.72□□□□□ -0.53
SCARB2-226ENST00000640916 KCNA3P22001 575 aa11.71□□□□□ -0.53
SCARB2-226ENST00000640916 TGFB2P61812 414 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms