RNA–Protein interactions for RNA: ENST00000640769.1

RTTN-222, Transcript of rotatin, human

APPRIS P1 TSL 2 BASIC

Gene RTTN, Length 8,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTTN-222	ENST00000640769	ROCK1	Q13464	1354 aa		10.07	□□□□□ -0.8
RTTN-222	ENST00000640769	SMTNL1	A8MU46	457 aa		10.07	□□□□□ -0.8
RTTN-222	ENST00000640769	CEP112	Q8N8E3	955 aa		10.07	□□□□□ -0.8
RTTN-222	ENST00000640769	CCDC174	Q6PII3	467 aa		10.07	□□□□□ -0.8
RTTN-222	ENST00000640769	FSD1	Q9BTV5	496 aa		10.07	□□□□□ -0.8
RTTN-222	ENST00000640769	DYNC1I1	O14576	645 aa		10.07	□□□□□ -0.8
RTTN-222	ENST00000640769	ATP2B2	Q01814	1243 aa		10.07	□□□□□ -0.8
RTTN-222	ENST00000640769	KRT222	Q8N1A0	295 aa		10.07	□□□□□ -0.8
RTTN-222	ENST00000640769	DES	P17661	470 aa		10.06	□□□□□ -0.8
RTTN-222	ENST00000640769	SFPQ	P23246	707 aa	Known RBP eCLIP	10.06	□□□□□ -0.8
RTTN-222	ENST00000640769	KRT85	P78386	507 aa		10.06	□□□□□ -0.8
RTTN-222	ENST00000640769	PRPF4B	Q13523	1007 aa	Known RBP	10.06	□□□□□ -0.8
RTTN-222	ENST00000640769	KLHL10	Q6JEL2	608 aa		10.06	□□□□□ -0.8
RTTN-222	ENST00000640769	SART3	Q15020	963 aa	Known RBP	10.06	□□□□□ -0.8
RTTN-222	ENST00000640769	CEP135	Q66GS9	1140 aa		10.06	□□□□□ -0.8
RTTN-222	ENST00000640769	RBM28	Q9NW13	759 aa	Known RBP	10.06	□□□□□ -0.8
RTTN-222	ENST00000640769		K7ELQ4	463 aa	Predicted RBP	10.06	□□□□□ -0.8
RTTN-222	ENST00000640769	FKBP5	Q13451	457 aa	Predicted RBP	10.06	□□□□□ -0.8
RTTN-222	ENST00000640769	MCM6	Q14566	821 aa		10.06	□□□□□ -0.8
RTTN-222	ENST00000640769	OTUD6B	Q8N6M0	293 aa		10.06	□□□□□ -0.8
RTTN-222	ENST00000640769	CEP57L1	Q8IYX8	460 aa		10.05	□□□□□ -0.8
RTTN-222	ENST00000640769	ANKS4B	Q8N8V4	417 aa		10.05	□□□□□ -0.8
RTTN-222	ENST00000640769	ATRIP	Q8WXE1	791 aa		10.05	□□□□□ -0.8
RTTN-222	ENST00000640769	RNF216	Q9NWF9	866 aa	Predicted RBP	10.05	□□□□□ -0.8
RTTN-222	ENST00000640769	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	10.05	□□□□□ -0.8
RTTN-222	ENST00000640769		V9GYY5	206 aa	Predicted RBP	10.05	□□□□□ -0.8
RTTN-222	ENST00000640769	CLNS1A	P54105	237 aa	Known RBP	10.05	□□□□□ -0.8
RTTN-222	ENST00000640769	JMY	Q8N9B5	988 aa		10.05	□□□□□ -0.8
RTTN-222	ENST00000640769	PIBF1	Q8WXW3	757 aa		10.05	□□□□□ -0.8
RTTN-222	ENST00000640769	CCDC121	Q6ZUS5	278 aa		10.05	□□□□□ -0.8
RTTN-222	ENST00000640769	ZNF428	Q96B54	188 aa		10.05	□□□□□ -0.8
RTTN-222	ENST00000640769	SETD5	Q9C0A6	1442 aa		10.05	□□□□□ -0.8
RTTN-222	ENST00000640769	FSD2	A1L4K1	749 aa		10.05	□□□□□ -0.8
RTTN-222	ENST00000640769	C11orf95	C9JLR9	678 aa	Predicted RBP	10.05	□□□□□ -0.8
RTTN-222	ENST00000640769	LARP1B	Q659C4	914 aa	Known RBP	10.05	□□□□□ -0.8
RTTN-222	ENST00000640769	CPLX3	Q8WVH0	158 aa		10.05	□□□□□ -0.8
RTTN-222	ENST00000640769	NUP88	Q99567	741 aa	Predicted RBP	10.05	□□□□□ -0.8
RTTN-222	ENST00000640769	CCNB3	Q8WWL7	1395 aa		10.05	□□□□□ -0.8
RTTN-222	ENST00000640769	KRBA2	Q6ZNG9	492 aa		10.05	□□□□□ -0.8
RTTN-222	ENST00000640769	DDX27	Q96GQ7	796 aa	Known RBP	10.05	□□□□□ -0.8
RTTN-222	ENST00000640769	WDR33	Q9C0J8	1336 aa	Known RBP	10.05	□□□□□ -0.8
RTTN-222	ENST00000640769	MAP3K11	Q16584	847 aa		10.05	□□□□□ -0.8
RTTN-222	ENST00000640769	CAPN2	P17655	700 aa		10.05	□□□□□ -0.8
RTTN-222	ENST00000640769	C1orf115	Q9H7X2	142 aa		10.04	□□□□□ -0.8
RTTN-222	ENST00000640769	KIF2A	O00139	706 aa	Predicted RBP	10.04	□□□□□ -0.8
RTTN-222	ENST00000640769	IKBKG	Q9Y6K9	419 aa		10.04	□□□□□ -0.8
RTTN-222	ENST00000640769	GOLGA6L9	A6NEM1	432 aa		10.04	□□□□□ -0.8
RTTN-222	ENST00000640769	DNAJC21	Q5F1R6	531 aa	Known RBP	10.04	□□□□□ -0.8
RTTN-222	ENST00000640769	RNF168	Q8IYW5	571 aa	Predicted RBP	10.04	□□□□□ -0.8
RTTN-222	ENST00000640769	DNAI2	Q9GZS0	605 aa		10.04	□□□□□ -0.8
RTTN-222	ENST00000640769	CCDC170	Q8IYT3	715 aa		10.04	□□□□□ -0.8
RTTN-222	ENST00000640769	RAB3IL1	Q8TBN0	382 aa		10.04	□□□□□ -0.8
RTTN-222	ENST00000640769	VPS18	Q9P253	973 aa		10.04	□□□□□ -0.8
RTTN-222	ENST00000640769	CCDC158	Q5M9N0	1113 aa		10.04	□□□□□ -0.8
RTTN-222	ENST00000640769	SCRIB	Q14160	1630 aa		10.04	□□□□□ -0.8
RTTN-222	ENST00000640769	TOP1	P11387	765 aa	Known RBP	10.04	□□□□□ -0.8
RTTN-222	ENST00000640769	MCM4	P33991	863 aa		10.04	□□□□□ -0.8
RTTN-222	ENST00000640769	PAFAH1B1	P43034	410 aa		10.04	□□□□□ -0.8
RTTN-222	ENST00000640769	LCA5	Q86VQ0	697 aa		10.04	□□□□□ -0.8
RTTN-222	ENST00000640769	PPP1R12C	Q9BZL4	782 aa		10.04	□□□□□ -0.8
RTTN-222	ENST00000640769	RASSF4	Q9H2L5	321 aa		10.04	□□□□□ -0.8
RTTN-222	ENST00000640769	CCDC114	Q96M63	670 aa		10.03	□□□□□ -0.8
RTTN-222	ENST00000640769	APAF1	O14727	1248 aa		10.03	□□□□□ -0.8
RTTN-222	ENST00000640769	PKD2	Q13563	968 aa		10.03	□□□□□ -0.8
RTTN-222	ENST00000640769	ZBTB12	Q9Y330	459 aa	Predicted RBP	10.03	□□□□□ -0.8
RTTN-222	ENST00000640769	CTNNA2	P26232	953 aa		10.03	□□□□□ -0.8
RTTN-222	ENST00000640769	AIMP1	Q12904	312 aa	Known RBP	10.03	□□□□□ -0.8
RTTN-222	ENST00000640769	CACNA2D4	Q7Z3S7	1137 aa		10.03	□□□□□ -0.8
RTTN-222	ENST00000640769	PANK3	Q9H999	370 aa		10.03	□□□□□ -0.8
RTTN-222	ENST00000640769	JADE2	Q9NQC1	790 aa		10.03	□□□□□ -0.8
RTTN-222	ENST00000640769	TERF2IP	Q9NYB0	399 aa		10.03	□□□□□ -0.8
RTTN-222	ENST00000640769	ANAPC4	Q9UJX5	808 aa		10.03	□□□□□ -0.8
RTTN-222	ENST00000640769	ARL1	P40616	181 aa	Predicted RBP	10.03	□□□□□ -0.8
RTTN-222	ENST00000640769	ZNF853	P0CG23	659 aa		10.03	□□□□□ -0.8
RTTN-222	ENST00000640769	MCM2	P49736	904 aa		10.03	□□□□□ -0.8
RTTN-222	ENST00000640769	SNW1	Q13573	536 aa	Known RBP	10.03	□□□□□ -0.8
RTTN-222	ENST00000640769	TAOK3	Q9H2K8	898 aa		10.03	□□□□□ -0.8
RTTN-222	ENST00000640769	LRCH2	Q5VUJ6	765 aa		10.03	□□□□□ -0.8
RTTN-222	ENST00000640769	ZEB2	O60315	1214 aa		10.02	□□□□□ -0.8
RTTN-222	ENST00000640769	BUB1B	O60566	1050 aa	Predicted RBP	10.02	□□□□□ -0.8
RTTN-222	ENST00000640769	SELENOS	Q9BQE4	189 aa		10.02	□□□□□ -0.8
RTTN-222	ENST00000640769	GTPBP4	Q9BZE4	634 aa	Known RBP	10.02	□□□□□ -0.8
RTTN-222	ENST00000640769	NSRP1	Q9H0G5	558 aa	Known RBP	10.02	□□□□□ -0.8
RTTN-222	ENST00000640769	PCK1	P35558	622 aa		10.02	□□□□□ -0.81
RTTN-222	ENST00000640769	CETN2	P41208	172 aa		10.02	□□□□□ -0.81
RTTN-222	ENST00000640769	BANK1	Q8NDB2	785 aa		10.02	□□□□□ -0.81
RTTN-222	ENST00000640769	NGDN	Q8NEJ9	315 aa	Known RBP	10.02	□□□□□ -0.81
RTTN-222	ENST00000640769	ZNF830	Q96NB3	372 aa	Predicted RBP	10.02	□□□□□ -0.81
RTTN-222	ENST00000640769	ZBTB16	Q05516	673 aa		10.02	□□□□□ -0.81
RTTN-222	ENST00000640769		A0A1B0GUL7	405 aa		10.02	□□□□□ -0.81
RTTN-222	ENST00000640769	SPTY2D1	Q68D10	685 aa	Predicted RBP	10.02	□□□□□ -0.81
RTTN-222	ENST00000640769	CCDC69	A6NI79	296 aa		10.02	□□□□□ -0.81
RTTN-222	ENST00000640769	POTEB2	H3BUK9	544 aa		10.02	□□□□□ -0.81
RTTN-222	ENST00000640769	CEP128	Q6ZU80	1094 aa		10.02	□□□□□ -0.81
RTTN-222	ENST00000640769	TTC5	Q8N0Z6	440 aa		10.02	□□□□□ -0.81
RTTN-222	ENST00000640769	FAM177B	A6PVY3	158 aa		10.02	□□□□□ -0.81
RTTN-222	ENST00000640769	LRRC43	Q8N309	656 aa		10.02	□□□□□ -0.81
RTTN-222	ENST00000640769	SYTL4	Q96C24	671 aa	Predicted RBP	10.02	□□□□□ -0.81
RTTN-222	ENST00000640769	USO1	O60763	962 aa	Known RBP	10.01	□□□□□ -0.81
RTTN-222	ENST00000640769	HDGF	P51858	240 aa	Known RBP	10.01	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 46 ms