RNA–Protein interactions for RNA: ENST00000640646.1

PRICKLE1-218, Transcript of prickle planar cell polarity protein 1, humanhuman

TSL 1 (best)

Gene PRICKLE1, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-218ENST00000640646 DDX54Q8TDD1 881 aaKnown RBP20.29■□□□□ 0.84
PRICKLE1-218ENST00000640646 GGNBP2Q9H3C7 697 aa20.29■□□□□ 0.84
PRICKLE1-218ENST00000640646 YY1P25490 414 aa20.28■□□□□ 0.84
PRICKLE1-218ENST00000640646 NBPF6Q5VWK0 638 aa20.28■□□□□ 0.84
PRICKLE1-218ENST00000640646 AKT1S1Q96B36 256 aa20.28■□□□□ 0.84
PRICKLE1-218ENST00000640646 NBPF4Q96M43 638 aa20.28■□□□□ 0.84
PRICKLE1-218ENST00000640646 ANKRD26Q9UPS8 1709 aa20.27■□□□□ 0.84
PRICKLE1-218ENST00000640646 SLC27A3Q5K4L6 730 aa20.26■□□□□ 0.83
PRICKLE1-218ENST00000640646 SYT17Q9BSW7 474 aa20.26■□□□□ 0.83
PRICKLE1-218ENST00000640646 INSRP06213 1382 aa20.25■□□□□ 0.83
PRICKLE1-218ENST00000640646 KIF24Q5T7B8 1368 aa20.25■□□□□ 0.83
PRICKLE1-218ENST00000640646 MAP3K5Q99683 1374 aa20.25■□□□□ 0.83
PRICKLE1-218ENST00000640646 ZCRB1Q8TBF4 217 aaKnown RBP20.25■□□□□ 0.83
PRICKLE1-218ENST00000640646 FHDC1Q9C0D6 1143 aaPredicted RBP20.25■□□□□ 0.83
PRICKLE1-218ENST00000640646 PRIM1P49642 420 aaKnown RBP20.24■□□□□ 0.83
PRICKLE1-218ENST00000640646 CARD14Q9BXL6 1004 aa20.24■□□□□ 0.83
PRICKLE1-218ENST00000640646 FLT4P35916 1363 aa20.23■□□□□ 0.83
PRICKLE1-218ENST00000640646 PNPLA7Q6ZV29 1317 aa20.23■□□□□ 0.83
PRICKLE1-218ENST00000640646 PKD1L3Q7Z443 1732 aa20.22■□□□□ 0.83
PRICKLE1-218ENST00000640646 NCAPD2Q15021 1401 aa20.22■□□□□ 0.83
PRICKLE1-218ENST00000640646 SMG6Q86US8 1419 aaKnown RBP20.22■□□□□ 0.83
PRICKLE1-218ENST00000640646 HSP90AB2PQ58FF8 381 aa20.22■□□□□ 0.83
PRICKLE1-218ENST00000640646 USHBP1Q8N6Y0 703 aa20.22■□□□□ 0.83
PRICKLE1-218ENST00000640646 CGNL1Q0VF96 1302 aa20.22■□□□□ 0.83
PRICKLE1-218ENST00000640646 TOGARAM1Q9Y4F4 1720 aa20.22■□□□□ 0.83
PRICKLE1-218ENST00000640646 KCNQ4P56696 695 aa20.21■□□□□ 0.83
PRICKLE1-218ENST00000640646 CDCA8Q53HL2 280 aa20.21■□□□□ 0.83
PRICKLE1-218ENST00000640646 NSD3Q9BZ95 1437 aa20.2■□□□□ 0.82
PRICKLE1-218ENST00000640646 SYTL4Q96C24 671 aaPredicted RBP20.2■□□□□ 0.82
PRICKLE1-218ENST00000640646 ARXQ96QS3 562 aa20.2■□□□□ 0.82
PRICKLE1-218ENST00000640646 DCAF8L1A6NGE4 600 aa20.19■□□□□ 0.82
PRICKLE1-218ENST00000640646 TIMELESSQ9UNS1 1208 aa20.19■□□□□ 0.82
PRICKLE1-218ENST00000640646 GOLGB1Q14789 3259 aaKnown RBP20.19■□□□□ 0.82
PRICKLE1-218ENST00000640646 SLC16A10Q8TF71 515 aa20.18■□□□□ 0.82
PRICKLE1-218ENST00000640646 C5P01031 1676 aa20.18■□□□□ 0.82
PRICKLE1-218ENST00000640646 EMILIN1Q9Y6C2 1016 aa20.17■□□□□ 0.82
PRICKLE1-218ENST00000640646 TAF1LQ8IZX4 1826 aa20.16■□□□□ 0.82
PRICKLE1-218ENST00000640646 RAPGEF4Q8WZA2 1011 aa20.16■□□□□ 0.82
PRICKLE1-218ENST00000640646 ITGB4P16144 1822 aa20.16■□□□□ 0.82
PRICKLE1-218ENST00000640646 PCDH11XQ9BZA7 1347 aa20.15■□□□□ 0.82
PRICKLE1-218ENST00000640646 PCDH11YQ9BZA8 1340 aa20.15■□□□□ 0.82
PRICKLE1-218ENST00000640646 CHD4Q14839 1912 aa20.15■□□□□ 0.82
PRICKLE1-218ENST00000640646 MAP2P11137 1827 aaKnown RBP20.14■□□□□ 0.81
PRICKLE1-218ENST00000640646 CLSPNQ9HAW4 1339 aa20.14■□□□□ 0.81
PRICKLE1-218ENST00000640646 CYP27B1O15528 508 aa20.14■□□□□ 0.81
PRICKLE1-218ENST00000640646 TATP17735 454 aaPredicted RBP20.14■□□□□ 0.81
PRICKLE1-218ENST00000640646 CCNL1Q9UK58 526 aaPredicted RBP20.14■□□□□ 0.81
PRICKLE1-218ENST00000640646 TFCP2L1Q9NZI6 479 aa20.13■□□□□ 0.81
PRICKLE1-218ENST00000640646 WASHC2AQ641Q2 1341 aa20.1■□□□□ 0.81
PRICKLE1-218ENST00000640646 PALLDQ8WX93 1383 aa20.09■□□□□ 0.81
PRICKLE1-218ENST00000640646 COL23A1Q86Y22 540 aaPredicted RBP20.09■□□□□ 0.81
PRICKLE1-218ENST00000640646 C4BP0C0L5 1744 aa20.08■□□□□ 0.81
PRICKLE1-218ENST00000640646 ZNF784Q8NCA9 323 aaPredicted RBP20.08■□□□□ 0.81
PRICKLE1-218ENST00000640646 POLD1P28340 1107 aa20.07■□□□□ 0.8
PRICKLE1-218ENST00000640646 NKX1-1Q15270 411 aaPredicted RBP20.07■□□□□ 0.8
PRICKLE1-218ENST00000640646 POLKQ9UBT6 870 aa20.07■□□□□ 0.8
PRICKLE1-218ENST00000640646 UBR3Q6ZT12 1888 aa20.06■□□□□ 0.8
PRICKLE1-218ENST00000640646 CCER1Q8TC90 406 aaPredicted RBP20.06■□□□□ 0.8
PRICKLE1-218ENST00000640646 EYA1Q99502 592 aa20.06■□□□□ 0.8
PRICKLE1-218ENST00000640646 MPRIPQ6WCQ1 1025 aa20.05■□□□□ 0.8
PRICKLE1-218ENST00000640646 NLGN2Q8NFZ4 835 aa20.05■□□□□ 0.8
PRICKLE1-218ENST00000640646 PPM1GO15355 546 aaPredicted RBP20.03■□□□□ 0.8
PRICKLE1-218ENST00000640646 AMIGO3Q86WK7 504 aa20.03■□□□□ 0.8
PRICKLE1-218ENST00000640646 PIGBQ92521 554 aa20.03■□□□□ 0.8
PRICKLE1-218ENST00000640646 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.03■□□□□ 0.8
PRICKLE1-218ENST00000640646 PLEKHG2Q9H7P9 1386 aa20.03■□□□□ 0.8
PRICKLE1-218ENST00000640646 EIF4A2Q14240 407 aaKnown RBP20■□□□□ 0.79
PRICKLE1-218ENST00000640646 KLHL34Q8N239 644 aa20■□□□□ 0.79
PRICKLE1-218ENST00000640646 SPG7Q9UQ90 795 aa20■□□□□ 0.79
PRICKLE1-218ENST00000640646 GPR162Q16538 588 aa19.99■□□□□ 0.79
PRICKLE1-218ENST00000640646 MSL1Q68DK7 614 aa19.99■□□□□ 0.79
PRICKLE1-218ENST00000640646 SMARCC1Q92922 1105 aaPredicted RBP19.99■□□□□ 0.79
PRICKLE1-218ENST00000640646 HSPA5P11021 654 aaKnown RBP19.98■□□□□ 0.79
PRICKLE1-218ENST00000640646 PHKG2P15735 406 aa19.98■□□□□ 0.79
PRICKLE1-218ENST00000640646 IGSF1Q8N6C5 1336 aa19.98■□□□□ 0.79
PRICKLE1-218ENST00000640646 MSH5O43196 834 aa19.97■□□□□ 0.79
PRICKLE1-218ENST00000640646 FLAD1Q8NFF5 587 aa19.97■□□□□ 0.79
PRICKLE1-218ENST00000640646 ZNF831Q5JPB2 1677 aa19.97■□□□□ 0.79
PRICKLE1-218ENST00000640646 YBX3P16989 372 aaKnown RBP eCLIP19.96■□□□□ 0.79
PRICKLE1-218ENST00000640646 HMGB2P26583 209 aaKnown RBP19.96■□□□□ 0.79
PRICKLE1-218ENST00000640646 EIF4G2P78344 907 aaKnown RBP eCLIP19.96■□□□□ 0.79
PRICKLE1-218ENST00000640646 KDRP35968 1356 aa19.95■□□□□ 0.79
PRICKLE1-218ENST00000640646 LOC102724428A0A0B4J2F2 783 aa19.95■□□□□ 0.78
PRICKLE1-218ENST00000640646 SIK1P57059 783 aa19.95■□□□□ 0.78
PRICKLE1-218ENST00000640646 IFNL2Q8IZJ0 200 aa19.95■□□□□ 0.78
PRICKLE1-218ENST00000640646 LINC00116Q8NCU8 138 aa19.95■□□□□ 0.78
PRICKLE1-218ENST00000640646 TNNT2P45379 298 aaPredicted RBP19.94■□□□□ 0.78
PRICKLE1-218ENST00000640646 ITPK1Q13572 414 aa19.94■□□□□ 0.78
PRICKLE1-218ENST00000640646 SMIM5Q71RC9 77 aa19.94■□□□□ 0.78
PRICKLE1-218ENST00000640646 POLR3GLQ9BT43 218 aa19.94■□□□□ 0.78
PRICKLE1-218ENST00000640646 PANK3Q9H999 370 aa19.94■□□□□ 0.78
PRICKLE1-218ENST00000640646 ASAP1Q9ULH1 1129 aa19.94■□□□□ 0.78
PRICKLE1-218ENST00000640646 AK7Q96M32 723 aa19.93■□□□□ 0.78
PRICKLE1-218ENST00000640646 TMOD3Q9NYL9 352 aa19.93■□□□□ 0.78
PRICKLE1-218ENST00000640646 COL5A3P25940 1745 aaPredicted RBP19.93■□□□□ 0.78
PRICKLE1-218ENST00000640646 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.92■□□□□ 0.78
PRICKLE1-218ENST00000640646 CD2APQ9Y5K6 639 aa19.92■□□□□ 0.78
PRICKLE1-218ENST00000640646 SSFA2P28290 1259 aa19.91■□□□□ 0.78
PRICKLE1-218ENST00000640646 PELP1Q8IZL8 1130 aaKnown RBP19.91■□□□□ 0.78
PRICKLE1-218ENST00000640646 ATG3Q9NT62 314 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms