RNA–Protein interactions for RNA: ENST00000640525.1

RTTN-219, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 2,136 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-219ENST00000640525 PARD3Q8TEW0 1356 aa7.02□□□□□ -1.29
RTTN-219ENST00000640525 ABTB2Q8N961 1025 aa7.01□□□□□ -1.29
RTTN-219ENST00000640525 SSH2Q76I76 1423 aa7.01□□□□□ -1.29
RTTN-219ENST00000640525 NRKQ7Z2Y5 1582 aa7.01□□□□□ -1.29
RTTN-219ENST00000640525 DPYSL4O14531 572 aa7.01□□□□□ -1.29
RTTN-219ENST00000640525 PPP2R1AP30153 589 aa7.01□□□□□ -1.29
RTTN-219ENST00000640525 RALBP1Q15311 655 aa7.01□□□□□ -1.29
RTTN-219ENST00000640525 FAM163AQ96GL9 167 aaPredicted RBP7.01□□□□□ -1.29
RTTN-219ENST00000640525 KIF20BQ96Q89 1820 aa7□□□□□ -1.29
RTTN-219ENST00000640525 COG3Q96JB2 828 aa7□□□□□ -1.29
RTTN-219ENST00000640525 EIF2AK3Q9NZJ5 1116 aaKnown RBP7□□□□□ -1.29
RTTN-219ENST00000640525 KIF1AQ12756 1690 aa7□□□□□ -1.29
RTTN-219ENST00000640525 MYBBP1AQ9BQG0 1328 aaKnown RBP7□□□□□ -1.29
RTTN-219ENST00000640525 TOM1O60784 492 aa7□□□□□ -1.29
RTTN-219ENST00000640525 MRS2Q9HD23 443 aa7□□□□□ -1.29
RTTN-219ENST00000640525 NPC1L1Q9UHC9 1359 aa6.99□□□□□ -1.29
RTTN-219ENST00000640525 NPHP3Q7Z494 1330 aa6.99□□□□□ -1.29
RTTN-219ENST00000640525 TTC21AQ8NDW8 1320 aa6.99□□□□□ -1.29
RTTN-219ENST00000640525 ZBTB7CA1YPR0 619 aa6.99□□□□□ -1.29
RTTN-219ENST00000640525 PPM1GO15355 546 aaPredicted RBP6.99□□□□□ -1.29
RTTN-219ENST00000640525 PRKCSHP14314 528 aaPredicted RBP6.99□□□□□ -1.29
RTTN-219ENST00000640525 CDAN1Q8IWY9 1227 aa6.99□□□□□ -1.29
RTTN-219ENST00000640525 SLAIN1Q8ND83 568 aa6.99□□□□□ -1.29
RTTN-219ENST00000640525 CABLES1Q8TDN4 633 aa6.99□□□□□ -1.29
RTTN-219ENST00000640525 PIK3C2AO00443 1686 aa6.99□□□□□ -1.29
RTTN-219ENST00000640525 ROBO1Q9Y6N7 1651 aa6.99□□□□□ -1.29
RTTN-219ENST00000640525 RRS1Q15050 365 aaKnown RBP6.98□□□□□ -1.29
RTTN-219ENST00000640525 LCE2DQ5TA82 110 aaPredicted RBP6.98□□□□□ -1.29
RTTN-219ENST00000640525 KHSRPQ92945 711 aaKnown RBP eCLIP6.98□□□□□ -1.29
RTTN-219ENST00000640525 NSD2O96028 1365 aa6.98□□□□□ -1.29
RTTN-219ENST00000640525 PXDNQ92626 1479 aa6.98□□□□□ -1.29
RTTN-219ENST00000640525 SENP3-EIF4A1A0A087X0R7 540 aa6.98□□□□□ -1.29
RTTN-219ENST00000640525 CCER2I3L3R5 266 aa6.98□□□□□ -1.29
RTTN-219ENST00000640525 MTHFSP49914 203 aa6.98□□□□□ -1.29
RTTN-219ENST00000640525 YTHDC1Q96MU7 727 aaKnown RBP6.98□□□□□ -1.29
RTTN-219ENST00000640525 EMILIN1Q9Y6C2 1016 aa6.98□□□□□ -1.29
RTTN-219ENST00000640525 TRPM3Q9HCF6 1732 aaPredicted RBP6.98□□□□□ -1.29
RTTN-219ENST00000640525 OVOS2A0A0J9YW53 1432 aa6.97□□□□□ -1.29
RTTN-219ENST00000640525 OVOS2Q6IE36 1432 aa6.97□□□□□ -1.29
RTTN-219ENST00000640525 NLRP13Q86W25 1043 aa6.97□□□□□ -1.29
RTTN-219ENST00000640525 FAM9BQ8IZU0 186 aa6.97□□□□□ -1.29
RTTN-219ENST00000640525 ANKRD26Q9UPS8 1709 aa6.97□□□□□ -1.29
RTTN-219ENST00000640525 SOS2Q07890 1332 aaPredicted RBP6.97□□□□□ -1.29
RTTN-219ENST00000640525 SPATA31A3Q5VYP0 1347 aa6.97□□□□□ -1.29
RTTN-219ENST00000640525 MLLT3P42568 568 aaPredicted RBP6.97□□□□□ -1.29
RTTN-219ENST00000640525 POLKQ9UBT6 870 aa6.97□□□□□ -1.29
RTTN-219ENST00000640525 TNS3Q68CZ2 1445 aa6.96□□□□□ -1.29
RTTN-219ENST00000640525 USP31Q70CQ4 1352 aa6.96□□□□□ -1.3
RTTN-219ENST00000640525 MARF1Q9Y4F3 1742 aaKnown RBP6.96□□□□□ -1.3
RTTN-219ENST00000640525 NHSL1Q5SYE7 1610 aa6.96□□□□□ -1.3
RTTN-219ENST00000640525 SBNO1A3KN83 1393 aa6.95□□□□□ -1.3
RTTN-219ENST00000640525 HOXB3P14651 431 aaPredicted RBP6.95□□□□□ -1.3
RTTN-219ENST00000640525 ZC3H6P61129 1189 aaKnown RBP6.95□□□□□ -1.3
RTTN-219ENST00000640525 MMRN1Q13201 1228 aa6.95□□□□□ -1.3
RTTN-219ENST00000640525 ARHGEF1Q92888 912 aaKnown RBP6.95□□□□□ -1.3
RTTN-219ENST00000640525 BRD4O60885 1362 aaPredicted RBP6.95□□□□□ -1.3
RTTN-219ENST00000640525 ALS2Q96Q42 1657 aa6.95□□□□□ -1.3
RTTN-219ENST00000640525 MAP3K19Q56UN5 1328 aa6.95□□□□□ -1.3
RTTN-219ENST00000640525 GCP02774 474 aa6.94□□□□□ -1.3
RTTN-219ENST00000640525 NBR1Q14596 966 aa6.94□□□□□ -1.3
RTTN-219ENST00000640525 MED1Q15648 1581 aaPredicted RBP6.94□□□□□ -1.3
RTTN-219ENST00000640525 IQSEC2Q5JU85 1478 aa6.94□□□□□ -1.3
RTTN-219ENST00000640525 MAP2P11137 1827 aaKnown RBP6.94□□□□□ -1.3
RTTN-219ENST00000640525 PHLPP1O60346 1717 aa6.94□□□□□ -1.3
RTTN-219ENST00000640525 AMPHP49418 695 aa6.94□□□□□ -1.3
RTTN-219ENST00000640525 HSP90AB2PQ58FF8 381 aa6.94□□□□□ -1.3
RTTN-219ENST00000640525 OXER1Q8TDS5 423 aa6.94□□□□□ -1.3
RTTN-219ENST00000640525 PNISRQ8TF01 805 aaKnown RBP6.94□□□□□ -1.3
RTTN-219ENST00000640525 LTV1Q96GA3 475 aaPredicted RBP6.94□□□□□ -1.3
RTTN-219ENST00000640525 USP19O94966 1318 aa6.93□□□□□ -1.3
RTTN-219ENST00000640525 CHRNA2Q15822 529 aa6.93□□□□□ -1.3
RTTN-219ENST00000640525 LRRC59Q96AG4 307 aaKnown RBP6.93□□□□□ -1.3
RTTN-219ENST00000640525 CFAP53Q96M91 514 aa6.93□□□□□ -1.3
RTTN-219ENST00000640525 AHDC1Q5TGY3 1603 aaPredicted RBP6.93□□□□□ -1.3
RTTN-219ENST00000640525 PEAK1Q9H792 1746 aa6.93□□□□□ -1.3
RTTN-219ENST00000640525 ARHGEF10O15013 1369 aa6.93□□□□□ -1.3
RTTN-219ENST00000640525 AATKQ6ZMQ8 1374 aa6.93□□□□□ -1.3
RTTN-219ENST00000640525 NUTM2BA6NNL0 878 aaPredicted RBP6.92□□□□□ -1.3
RTTN-219ENST00000640525 NUTM2EB1AL46 878 aaPredicted RBP6.92□□□□□ -1.3
RTTN-219ENST00000640525 U2SURPO15042 1029 aaKnown RBP6.92□□□□□ -1.3
RTTN-219ENST00000640525 HSPA1LP34931 641 aa6.92□□□□□ -1.3
RTTN-219ENST00000640525 NUTM2AQ8IVF1 878 aaPredicted RBP6.92□□□□□ -1.3
RTTN-219ENST00000640525 KCNH5Q8NCM2 988 aa6.92□□□□□ -1.3
RTTN-219ENST00000640525 NFAT5O94916 1531 aa6.92□□□□□ -1.3
RTTN-219ENST00000640525 COL16A1Q07092 1604 aaPredicted RBP6.92□□□□□ -1.3
RTTN-219ENST00000640525 HOXC9P31274 260 aa6.92□□□□□ -1.3
RTTN-219ENST00000640525 WDR43Q15061 677 aaKnown RBP eCLIP6.92□□□□□ -1.3
RTTN-219ENST00000640525 CCDC146Q8IYE0 955 aa6.92□□□□□ -1.3
RTTN-219ENST00000640525 ADAMTS8Q9UP79 889 aa6.92□□□□□ -1.3
RTTN-219ENST00000640525 SLIT3O75094 1523 aa6.92□□□□□ -1.3
RTTN-219ENST00000640525 PNPLA6Q8IY17 1366 aa6.92□□□□□ -1.3
RTTN-219ENST00000640525 PHRF1Q9P1Y6 1649 aaKnown RBP6.92□□□□□ -1.3
RTTN-219ENST00000640525 USP54Q70EL1 1684 aa6.91□□□□□ -1.3
RTTN-219ENST00000640525 DIAPH1O60610 1272 aaKnown RBP6.91□□□□□ -1.3
RTTN-219ENST00000640525 MAP3K9P80192 1104 aa6.91□□□□□ -1.3
RTTN-219ENST00000640525 ARHGEF25Q86VW2 580 aa6.91□□□□□ -1.3
RTTN-219ENST00000640525 KIAA0232Q92628 1395 aa6.91□□□□□ -1.3
RTTN-219ENST00000640525 COL3A1P02461 1466 aaPredicted RBP6.91□□□□□ -1.3
RTTN-219ENST00000640525 ADAMTS2O95450 1211 aa6.91□□□□□ -1.3
RTTN-219ENST00000640525 HMOX1P09601 288 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms