RNA–Protein interactions for RNA: ENST00000640251.1

PAX6-267, Transcript of paired box 6, human

TSL 5

Gene PAX6, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-267	ENST00000640251	COG6	Q9Y2V7	657 aa		11.3	□□□□□ -0.6
PAX6-267	ENST00000640251	ADCY10	Q96PN6	1610 aa		11.29	□□□□□ -0.6
PAX6-267	ENST00000640251	UBTF	P17480	764 aa	Known RBP	11.29	□□□□□ -0.6
PAX6-267	ENST00000640251	CARMIL1	Q5VZK9	1371 aa		11.28	□□□□□ -0.6
PAX6-267	ENST00000640251	CUL7	Q14999	1698 aa		11.28	□□□□□ -0.6
PAX6-267	ENST00000640251	ZIC2	O95409	532 aa	Predicted RBP	11.28	□□□□□ -0.6
PAX6-267	ENST00000640251	NBPF20	Q3BBV1	942 aa		11.28	□□□□□ -0.6
PAX6-267	ENST00000640251	CCDC116	Q8IYX3	515 aa		11.28	□□□□□ -0.6
PAX6-267	ENST00000640251	TIMP2	P16035	220 aa		11.27	□□□□□ -0.61
PAX6-267	ENST00000640251	VAC14	Q08AM6	782 aa		11.27	□□□□□ -0.61
PAX6-267	ENST00000640251	INTS6L	Q5JSJ4	861 aa	Known RBP	11.27	□□□□□ -0.61
PAX6-267	ENST00000640251	ITPKC	Q96DU7	683 aa		11.27	□□□□□ -0.61
PAX6-267	ENST00000640251	ZFAND3	Q9H8U3	227 aa		11.27	□□□□□ -0.61
PAX6-267	ENST00000640251	ZNF330	Q9Y3S2	320 aa	Predicted RBP	11.27	□□□□□ -0.61
PAX6-267	ENST00000640251	KIAA0586	Q9BVV6	1533 aa		11.26	□□□□□ -0.61
PAX6-267	ENST00000640251	RAD21	O60216	631 aa		11.26	□□□□□ -0.61
PAX6-267	ENST00000640251	KLF16	Q9BXK1	252 aa	Predicted RBP	11.26	□□□□□ -0.61
PAX6-267	ENST00000640251	GIGYF1	O75420	1035 aa	Predicted RBP	11.25	□□□□□ -0.61
PAX6-267	ENST00000640251	BMP1	P13497	986 aa		11.24	□□□□□ -0.61
PAX6-267	ENST00000640251	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	11.24	□□□□□ -0.61
PAX6-267	ENST00000640251	ATP13A2	Q9NQ11	1180 aa		11.24	□□□□□ -0.61
PAX6-267	ENST00000640251	EMILIN1	Q9Y6C2	1016 aa		11.24	□□□□□ -0.61
PAX6-267	ENST00000640251	POTEC	B2RU33	542 aa		11.23	□□□□□ -0.61
PAX6-267	ENST00000640251	FAM69C	Q0P6D2	419 aa		11.23	□□□□□ -0.61
PAX6-267	ENST00000640251	TSPOAP1	O95153	1857 aa		11.23	□□□□□ -0.61
PAX6-267	ENST00000640251	TMPRSS4	Q9NRS4	437 aa		11.22	□□□□□ -0.61
PAX6-267	ENST00000640251	GMPR2	Q9P2T1	348 aa	Known RBP	11.22	□□□□□ -0.61
PAX6-267	ENST00000640251	ESPN	B1AK53	854 aa		11.21	□□□□□ -0.61
PAX6-267	ENST00000640251	EIF4G2	P78344	907 aa	Known RBP eCLIP	11.21	□□□□□ -0.61
PAX6-267	ENST00000640251	DHX9	Q08211	1270 aa	Known RBP	11.21	□□□□□ -0.61
PAX6-267	ENST00000640251	WASHC4	Q2M389	1173 aa		11.21	□□□□□ -0.61
PAX6-267	ENST00000640251	ZNF787	Q6DD87	383 aa		11.21	□□□□□ -0.61
PAX6-267	ENST00000640251	CLUAP1	Q96AJ1	413 aa		11.21	□□□□□ -0.61
PAX6-267	ENST00000640251	PGPEP1	Q9NXJ5	209 aa		11.21	□□□□□ -0.61
PAX6-267	ENST00000640251	ERVH48-1	M5A8F1	160 aa		11.2	□□□□□ -0.62
PAX6-267	ENST00000640251	MCCD1	P59942	119 aa	Predicted RBP	11.2	□□□□□ -0.62
PAX6-267	ENST00000640251	IQGAP2	Q13576	1575 aa		11.2	□□□□□ -0.62
PAX6-267	ENST00000640251	DIP2B	Q9P265	1576 aa		11.2	□□□□□ -0.62
PAX6-267	ENST00000640251	TRIM46	Q7Z4K8	759 aa		11.19	□□□□□ -0.62
PAX6-267	ENST00000640251	WWC1	Q8IX03	1113 aa		11.19	□□□□□ -0.62
PAX6-267	ENST00000640251	DISP1	Q96F81	1524 aa		11.19	□□□□□ -0.62
PAX6-267	ENST00000640251	PTPRG	P23470	1445 aa		11.18	□□□□□ -0.62
PAX6-267	ENST00000640251	CBLB	Q13191	982 aa		11.18	□□□□□ -0.62
PAX6-267	ENST00000640251	ZNF592	Q92610	1267 aa		11.18	□□□□□ -0.62
PAX6-267	ENST00000640251	CEP126	Q9P2H0	1117 aa		11.18	□□□□□ -0.62
PAX6-267	ENST00000640251	ABCC10	Q5T3U5	1492 aa		11.18	□□□□□ -0.62
PAX6-267	ENST00000640251	ZNF784	Q8NCA9	323 aa	Predicted RBP	11.17	□□□□□ -0.62
PAX6-267	ENST00000640251	MRPL14	Q6P1L8	145 aa	Known RBP	11.16	□□□□□ -0.62
PAX6-267	ENST00000640251	SEPT12	Q8IYM1	358 aa		11.16	□□□□□ -0.62
PAX6-267	ENST00000640251	PURB	Q96QR8	312 aa	Known RBP	11.16	□□□□□ -0.62
PAX6-267	ENST00000640251	RAPGEF2	Q9Y4G8	1499 aa		11.16	□□□□□ -0.62
PAX6-267	ENST00000640251	MAPKBP1	O60336	1514 aa		11.15	□□□□□ -0.62
PAX6-267	ENST00000640251	C11orf95	C9JLR9	678 aa	Predicted RBP	11.15	□□□□□ -0.62
PAX6-267	ENST00000640251	SEMA3F	Q13275	785 aa		11.15	□□□□□ -0.62
PAX6-267	ENST00000640251	C6orf118	Q5T5N4	469 aa		11.15	□□□□□ -0.62
PAX6-267	ENST00000640251	RNF20	Q5VTR2	975 aa		11.15	□□□□□ -0.62
PAX6-267	ENST00000640251	CYLD	Q9NQC7	956 aa		11.15	□□□□□ -0.62
PAX6-267	ENST00000640251	TNIK	Q9UKE5	1360 aa		11.15	□□□□□ -0.63
PAX6-267	ENST00000640251	SCARF1	Q14162	830 aa		11.14	□□□□□ -0.63
PAX6-267	ENST00000640251	MEIOB	Q8N635	442 aa		11.14	□□□□□ -0.63
PAX6-267	ENST00000640251	ZFP42	Q96MM3	310 aa		11.14	□□□□□ -0.63
PAX6-267	ENST00000640251	ABCC2	Q92887	1545 aa		11.14	□□□□□ -0.63
PAX6-267	ENST00000640251	UPP2	O95045	317 aa		11.13	□□□□□ -0.63
PAX6-267	ENST00000640251	AGBL1	Q96MI9	1066 aa		11.13	□□□□□ -0.63
PAX6-267	ENST00000640251	SENP2	Q9HC62	589 aa		11.13	□□□□□ -0.63
PAX6-267	ENST00000640251	PCDHB11	Q9Y5F2	797 aa		11.13	□□□□□ -0.63
PAX6-267	ENST00000640251	GTF3C3	Q9Y5Q9	886 aa		11.13	□□□□□ -0.63
PAX6-267	ENST00000640251	ARID3C	A6NKF2	412 aa		11.12	□□□□□ -0.63
PAX6-267	ENST00000640251	POM121C	A8CG34	1229 aa		11.12	□□□□□ -0.63
PAX6-267	ENST00000640251	BMP2	P12643	396 aa		11.12	□□□□□ -0.63
PAX6-267	ENST00000640251	KIAA0556	O60303	1618 aa		11.12	□□□□□ -0.63
PAX6-267	ENST00000640251	CARMIL2	Q6F5E8	1435 aa		11.11	□□□□□ -0.63
PAX6-267	ENST00000640251	ASXL2	Q76L83	1435 aa		11.11	□□□□□ -0.63
PAX6-267	ENST00000640251	LILRA1	O75019	489 aa		11.11	□□□□□ -0.63
PAX6-267	ENST00000640251	SNRPB	P14678	240 aa	Known RBP	11.11	□□□□□ -0.63
PAX6-267	ENST00000640251	ADD1	P35611	737 aa	Known RBP	11.11	□□□□□ -0.63
PAX6-267	ENST00000640251	SLFNL1	Q499Z3	407 aa		11.11	□□□□□ -0.63
PAX6-267	ENST00000640251		Q6ZVU0	165 aa		11.11	□□□□□ -0.63
PAX6-267	ENST00000640251	LINC00528	Q8N1L1	170 aa		11.11	□□□□□ -0.63
PAX6-267	ENST00000640251	PPRC1	Q5VV67	1664 aa	Known RBP	11.11	□□□□□ -0.63
PAX6-267	ENST00000640251	CTTNBP2	Q8WZ74	1663 aa		11.11	□□□□□ -0.63
PAX6-267	ENST00000640251	UGGT2	Q9NYU1	1516 aa		11.1	□□□□□ -0.63
PAX6-267	ENST00000640251	TSGA10IP	Q3SY00	556 aa		11.1	□□□□□ -0.63
PAX6-267	ENST00000640251	PROSER2	Q86WR7	435 aa	Predicted RBP	11.1	□□□□□ -0.63
PAX6-267	ENST00000640251	FAM9A	Q8IZU1	332 aa	Predicted RBP	11.1	□□□□□ -0.63
PAX6-267	ENST00000640251	TRIM47	Q96LD4	638 aa		11.1	□□□□□ -0.63
PAX6-267	ENST00000640251	CCDC85A	Q96PX6	553 aa	Predicted RBP	11.1	□□□□□ -0.63
PAX6-267	ENST00000640251	UACA	Q9BZF9	1416 aa		11.09	□□□□□ -0.63
PAX6-267	ENST00000640251	PLB1	Q6P1J6	1458 aa		11.09	□□□□□ -0.63
PAX6-267	ENST00000640251	SOX11	P35716	441 aa		11.09	□□□□□ -0.63
PAX6-267	ENST00000640251	RANGAP1	P46060	587 aa	Predicted RBP	11.09	□□□□□ -0.63
PAX6-267	ENST00000640251	RELB	Q01201	579 aa		11.09	□□□□□ -0.63
PAX6-267	ENST00000640251	RNF135	Q8IUD6	432 aa		11.09	□□□□□ -0.63
PAX6-267	ENST00000640251	TSEN34	Q9BSV6	310 aa	Known RBP	11.09	□□□□□ -0.63
PAX6-267	ENST00000640251	ZCCHC11	Q5TAX3	1644 aa	Known RBP	11.09	□□□□□ -0.63
PAX6-267	ENST00000640251	KIFC2	Q96AC6	838 aa		11.08	□□□□□ -0.64
PAX6-267	ENST00000640251	CDCA7	Q9BWT1	371 aa	Predicted RBP	11.08	□□□□□ -0.64
PAX6-267	ENST00000640251	KDM6B	O15054	1643 aa		11.08	□□□□□ -0.64
PAX6-267	ENST00000640251	SCTR	P47872	440 aa		11.07	□□□□□ -0.64
PAX6-267	ENST00000640251	CCDC125	Q86Z20	511 aa		11.07	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms