RNA–Protein interactions for RNA: ENST00000640094.1

HLA-B-257, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 147 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-257ENST00000640094 NSD2O96028 1365 aa12.36□□□□□ -0.43
HLA-B-257ENST00000640094 HSPA6P17066 643 aa12.36□□□□□ -0.43
HLA-B-257ENST00000640094 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.36□□□□□ -0.43
HLA-B-257ENST00000640094 CICQ96RK0 1608 aaPredicted RBP12.36□□□□□ -0.43
HLA-B-257ENST00000640094 USP47Q96K76 1375 aa12.35□□□□□ -0.43
HLA-B-257ENST00000640094 MSH5O43196 834 aa12.35□□□□□ -0.43
HLA-B-257ENST00000640094 DDX54Q8TDD1 881 aaKnown RBP12.35□□□□□ -0.43
HLA-B-257ENST00000640094 CCNL1Q9UK58 526 aaPredicted RBP12.35□□□□□ -0.43
HLA-B-257ENST00000640094 NSD3Q9BZ95 1437 aa12.35□□□□□ -0.43
HLA-B-257ENST00000640094 C4BP0C0L5 1744 aa12.34□□□□□ -0.43
HLA-B-257ENST00000640094 UBR3Q6ZT12 1888 aa12.34□□□□□ -0.43
HLA-B-257ENST00000640094 HDGFL2Q7Z4V5 671 aaPredicted RBP12.34□□□□□ -0.43
HLA-B-257ENST00000640094 TOGARAM1Q9Y4F4 1720 aa12.34□□□□□ -0.43
HLA-B-257ENST00000640094 MEGF6O75095 1541 aa12.33□□□□□ -0.44
HLA-B-257ENST00000640094 NME9Q86XW9 330 aa12.33□□□□□ -0.44
HLA-B-257ENST00000640094 CD2APQ9Y5K6 639 aa12.33□□□□□ -0.44
HLA-B-257ENST00000640094 SMG6Q86US8 1419 aaKnown RBP12.33□□□□□ -0.44
HLA-B-257ENST00000640094 ITGB4P16144 1822 aa12.32□□□□□ -0.44
HLA-B-257ENST00000640094 RTL1A6NKG5 1358 aa12.31□□□□□ -0.44
HLA-B-257ENST00000640094 PRIM1P49642 420 aaKnown RBP12.31□□□□□ -0.44
HLA-B-257ENST00000640094 FLAD1Q8NFF5 587 aa12.31□□□□□ -0.44
HLA-B-257ENST00000640094 WDR90Q96KV7 1748 aa12.31□□□□□ -0.44
HLA-B-257ENST00000640094 A0A1W2PP64 1363 aa12.3□□□□□ -0.44
HLA-B-257ENST00000640094 KCNQ4P56696 695 aa12.3□□□□□ -0.44
HLA-B-257ENST00000640094 MSL1Q68DK7 614 aa12.3□□□□□ -0.44
HLA-B-257ENST00000640094 IP6K1Q92551 441 aa12.3□□□□□ -0.44
HLA-B-257ENST00000640094 TERF2IPQ9NYB0 399 aa12.3□□□□□ -0.44
HLA-B-257ENST00000640094 PKD1L3Q7Z443 1732 aa12.3□□□□□ -0.44
HLA-B-257ENST00000640094 CGNL1Q0VF96 1302 aa12.3□□□□□ -0.44
HLA-B-257ENST00000640094 KIF20BQ96Q89 1820 aa12.3□□□□□ -0.44
HLA-B-257ENST00000640094 KIF13BQ9NQT8 1826 aa12.3□□□□□ -0.44
HLA-B-257ENST00000640094 COL23A1Q86Y22 540 aaPredicted RBP12.29□□□□□ -0.44
HLA-B-257ENST00000640094 ZCRB1Q8TBF4 217 aaKnown RBP12.29□□□□□ -0.44
HLA-B-257ENST00000640094 TMC1Q8TDI8 760 aa12.29□□□□□ -0.44
HLA-B-257ENST00000640094 ZNF526Q8TF50 670 aaPredicted RBP12.29□□□□□ -0.44
HLA-B-257ENST00000640094 L3MBTL2Q969R5 705 aa12.28□□□□□ -0.44
HLA-B-257ENST00000640094 LTV1Q96GA3 475 aaPredicted RBP12.28□□□□□ -0.44
HLA-B-257ENST00000640094 PALLDQ8WX93 1383 aa12.28□□□□□ -0.44
HLA-B-257ENST00000640094 IGSF1Q8N6C5 1336 aa12.27□□□□□ -0.45
HLA-B-257ENST00000640094 PCDH11XQ9BZA7 1347 aa12.27□□□□□ -0.45
HLA-B-257ENST00000640094 PCDH11YQ9BZA8 1340 aa12.27□□□□□ -0.45
HLA-B-257ENST00000640094 APLP1P51693 650 aa12.26□□□□□ -0.45
HLA-B-257ENST00000640094 KIAA1551Q9HCM1 1747 aa12.25□□□□□ -0.45
HLA-B-257ENST00000640094 AMPHP49418 695 aa12.25□□□□□ -0.45
HLA-B-257ENST00000640094 RAPGEF4Q8WZA2 1011 aa12.25□□□□□ -0.45
HLA-B-257ENST00000640094 COG3Q96JB2 828 aa12.25□□□□□ -0.45
HLA-B-257ENST00000640094 AK7Q96M32 723 aa12.25□□□□□ -0.45
HLA-B-257ENST00000640094 MAP3K19Q56UN5 1328 aa12.25□□□□□ -0.45
HLA-B-257ENST00000640094 MAP2P11137 1827 aaKnown RBP12.25□□□□□ -0.45
HLA-B-257ENST00000640094 BRCA1P38398 1863 aaKnown RBP12.25□□□□□ -0.45
HLA-B-257ENST00000640094 HOXC9P31274 260 aa12.24□□□□□ -0.45
HLA-B-257ENST00000640094 N4BP2Q86UW6 1770 aaPredicted RBP12.24□□□□□ -0.45
HLA-B-257ENST00000640094 ARFGEF1Q9Y6D6 1849 aa12.23□□□□□ -0.45
HLA-B-257ENST00000640094 TNRC6CQ9HCJ0 1690 aaKnown RBP12.23□□□□□ -0.45
HLA-B-257ENST00000640094 ANKRD26Q9UPS8 1709 aa12.23□□□□□ -0.45
HLA-B-257ENST00000640094 KIF3CO14782 793 aa12.22□□□□□ -0.45
HLA-B-257ENST00000640094 SMARCC1Q92922 1105 aaPredicted RBP12.22□□□□□ -0.45
HLA-B-257ENST00000640094 PUS7Q96PZ0 661 aaKnown RBP12.22□□□□□ -0.45
HLA-B-257ENST00000640094 PLEKHG2Q9H7P9 1386 aa12.21□□□□□ -0.45
HLA-B-257ENST00000640094 TATP17735 454 aaPredicted RBP12.21□□□□□ -0.45
HLA-B-257ENST00000640094 SSFA2P28290 1259 aa12.21□□□□□ -0.45
HLA-B-257ENST00000640094 CARD11Q9BXL7 1154 aa12.21□□□□□ -0.45
HLA-B-257ENST00000640094 SLC12A5Q9H2X9 1139 aa12.21□□□□□ -0.45
HLA-B-257ENST00000640094 ZNF831Q5JPB2 1677 aa12.21□□□□□ -0.45
HLA-B-257ENST00000640094 PXDNLA1KZ92 1463 aa12.21□□□□□ -0.46
HLA-B-257ENST00000640094 C4AP0C0L4 1744 aa12.2□□□□□ -0.46
HLA-B-257ENST00000640094 KIF24Q5T7B8 1368 aa12.2□□□□□ -0.46
HLA-B-257ENST00000640094 TOMM70O94826 608 aa12.2□□□□□ -0.46
HLA-B-257ENST00000640094 PHF14O94880 888 aa12.2□□□□□ -0.46
HLA-B-257ENST00000640094 FLT4P35916 1363 aa12.19□□□□□ -0.46
HLA-B-257ENST00000640094 COL5A3P25940 1745 aaPredicted RBP12.19□□□□□ -0.46
HLA-B-257ENST00000640094 INSRP06213 1382 aa12.18□□□□□ -0.46
HLA-B-257ENST00000640094 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.18□□□□□ -0.46
HLA-B-257ENST00000640094 MPRIPQ6WCQ1 1025 aa12.18□□□□□ -0.46
HLA-B-257ENST00000640094 WWC3Q9ULE0 1092 aa12.18□□□□□ -0.46
HLA-B-257ENST00000640094 C10orf71Q711Q0 1435 aa12.18□□□□□ -0.46
HLA-B-257ENST00000640094 USHBP1Q8N6Y0 703 aa12.17□□□□□ -0.46
HLA-B-257ENST00000640094 SLC24A1O60721 1099 aa12.16□□□□□ -0.46
HLA-B-257ENST00000640094 NBPF6Q5VWK0 638 aa12.16□□□□□ -0.46
HLA-B-257ENST00000640094 C16orf71Q8IYS4 520 aaPredicted RBP12.16□□□□□ -0.46
HLA-B-257ENST00000640094 NBPF4Q96M43 638 aa12.16□□□□□ -0.46
HLA-B-257ENST00000640094 NCAPD2Q15021 1401 aa12.16□□□□□ -0.46
HLA-B-257ENST00000640094 LOC102724428A0A0B4J2F2 783 aa12.14□□□□□ -0.47
HLA-B-257ENST00000640094 GNPATO15228 680 aa12.14□□□□□ -0.47
HLA-B-257ENST00000640094 SIK1P57059 783 aa12.14□□□□□ -0.47
HLA-B-257ENST00000640094 NEUROD1Q13562 356 aa12.14□□□□□ -0.47
HLA-B-257ENST00000640094 RRS1Q15050 365 aaKnown RBP12.14□□□□□ -0.47
HLA-B-257ENST00000640094 RBM46Q8TBY0 533 aaKnown RBP12.14□□□□□ -0.47
HLA-B-257ENST00000640094 MMP10P09238 476 aa12.13□□□□□ -0.47
HLA-B-257ENST00000640094 TGFB2P61812 414 aa12.13□□□□□ -0.47
HLA-B-257ENST00000640094 AMIGO3Q86WK7 504 aa12.13□□□□□ -0.47
HLA-B-257ENST00000640094 DNAJC5GQ8N7S2 189 aa12.13□□□□□ -0.47
HLA-B-257ENST00000640094 SIN3AQ96ST3 1273 aa12.13□□□□□ -0.47
HLA-B-257ENST00000640094 BCS1LQ9Y276 419 aa12.13□□□□□ -0.47
HLA-B-257ENST00000640094 TIAM2Q8IVF5 1701 aa12.13□□□□□ -0.47
HLA-B-257ENST00000640094 CYP27B1O15528 508 aa12.12□□□□□ -0.47
HLA-B-257ENST00000640094 FSTL1Q12841 308 aa12.12□□□□□ -0.47
HLA-B-257ENST00000640094 LINC00116Q8NCU8 138 aa12.12□□□□□ -0.47
HLA-B-257ENST00000640094 KLRG1Q96E93 195 aa12.12□□□□□ -0.47
HLA-B-257ENST00000640094 TMOD3Q9NYL9 352 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms