RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 TTC21AQ8NDW8 1320 aa10.7□□□□□ -0.7
SCARB2-220ENST00000640076 MORC1Q86VD1 984 aa10.7□□□□□ -0.7
SCARB2-220ENST00000640076 BCL11AQ9H165 835 aa10.7□□□□□ -0.7
SCARB2-220ENST00000640076 RNF39Q9H2S5 420 aa10.69□□□□□ -0.7
SCARB2-220ENST00000640076 PIK3C2AO00443 1686 aa10.69□□□□□ -0.7
SCARB2-220ENST00000640076 PPP2R1AP30153 589 aa10.68□□□□□ -0.7
SCARB2-220ENST00000640076 ZRANB1Q9UGI0 708 aa10.68□□□□□ -0.7
SCARB2-220ENST00000640076 TRPM3Q9HCF6 1732 aaPredicted RBP10.68□□□□□ -0.7
SCARB2-220ENST00000640076 OVOS2A0A0J9YW53 1432 aa10.68□□□□□ -0.7
SCARB2-220ENST00000640076 OVOS2Q6IE36 1432 aa10.68□□□□□ -0.7
SCARB2-220ENST00000640076 NPHP3Q7Z494 1330 aa10.68□□□□□ -0.7
SCARB2-220ENST00000640076 PSEN1P49768 467 aa10.68□□□□□ -0.7
SCARB2-220ENST00000640076 XPCQ01831 940 aaPredicted RBP10.68□□□□□ -0.7
SCARB2-220ENST00000640076 CCDC184Q52MB2 194 aa10.68□□□□□ -0.7
SCARB2-220ENST00000640076 NLRP13Q86W25 1043 aa10.68□□□□□ -0.7
SCARB2-220ENST00000640076 KRT28Q7Z3Y7 464 aa10.67□□□□□ -0.7
SCARB2-220ENST00000640076 DDX17Q92841 729 aaKnown RBP10.67□□□□□ -0.7
SCARB2-220ENST00000640076 IQSEC2Q5JU85 1478 aa10.67□□□□□ -0.7
SCARB2-220ENST00000640076 USP31Q70CQ4 1352 aa10.67□□□□□ -0.7
SCARB2-220ENST00000640076 PAK3O75914 559 aaPredicted RBP10.66□□□□□ -0.7
SCARB2-220ENST00000640076 TNNT2P45379 298 aaPredicted RBP10.66□□□□□ -0.7
SCARB2-220ENST00000640076 KCNA1Q09470 495 aa10.66□□□□□ -0.7
SCARB2-220ENST00000640076 COG3Q96JB2 828 aa10.66□□□□□ -0.7
SCARB2-220ENST00000640076 PXDNQ92626 1479 aa10.66□□□□□ -0.7
SCARB2-220ENST00000640076 USP54Q70EL1 1684 aa10.66□□□□□ -0.7
SCARB2-220ENST00000640076 SOX12O15370 315 aa10.66□□□□□ -0.7
SCARB2-220ENST00000640076 SH3D19Q5HYK7 790 aa10.66□□□□□ -0.7
SCARB2-220ENST00000640076 PCDHB8Q9UN66 801 aa10.66□□□□□ -0.7
SCARB2-220ENST00000640076 PCDHB13Q9Y5F0 798 aa10.66□□□□□ -0.7
SCARB2-220ENST00000640076 MARF1Q9Y4F3 1742 aaKnown RBP10.66□□□□□ -0.7
SCARB2-220ENST00000640076 TTLL12Q14166 644 aaPredicted RBP10.65□□□□□ -0.7
SCARB2-220ENST00000640076 ABTB2Q8N961 1025 aa10.65□□□□□ -0.7
SCARB2-220ENST00000640076 MRS2Q9HD23 443 aa10.65□□□□□ -0.7
SCARB2-220ENST00000640076 SBNO1A3KN83 1393 aa10.65□□□□□ -0.7
SCARB2-220ENST00000640076 ALS2Q96Q42 1657 aa10.65□□□□□ -0.7
SCARB2-220ENST00000640076 ROBO1Q9Y6N7 1651 aa10.65□□□□□ -0.7
SCARB2-220ENST00000640076 NHSL1Q5SYE7 1610 aa10.65□□□□□ -0.71
SCARB2-220ENST00000640076 DSG3P32926 999 aa10.65□□□□□ -0.71
SCARB2-220ENST00000640076 TOM1O60784 492 aa10.64□□□□□ -0.71
SCARB2-220ENST00000640076 MS4A1P11836 297 aa10.64□□□□□ -0.71
SCARB2-220ENST00000640076 EFCAB3Q8N7B9 438 aa10.64□□□□□ -0.71
SCARB2-220ENST00000640076 CERKQ8TCT0 537 aa10.64□□□□□ -0.71
SCARB2-220ENST00000640076 COG6Q9Y2V7 657 aa10.64□□□□□ -0.71
SCARB2-220ENST00000640076 SOS2Q07890 1332 aaPredicted RBP10.64□□□□□ -0.71
SCARB2-220ENST00000640076 BRD1O95696 1058 aa10.63□□□□□ -0.71
SCARB2-220ENST00000640076 ZNF330Q9Y3S2 320 aaPredicted RBP10.63□□□□□ -0.71
SCARB2-220ENST00000640076 AATKQ6ZMQ8 1374 aa10.63□□□□□ -0.71
SCARB2-220ENST00000640076 BRD2P25440 801 aaKnown RBP10.63□□□□□ -0.71
SCARB2-220ENST00000640076 NUTM2GQ5VZR2 741 aa10.63□□□□□ -0.71
SCARB2-220ENST00000640076 MAP2P11137 1827 aaKnown RBP10.63□□□□□ -0.71
SCARB2-220ENST00000640076 SPATA31A3Q5VYP0 1347 aa10.62□□□□□ -0.71
SCARB2-220ENST00000640076 TNS3Q68CZ2 1445 aa10.62□□□□□ -0.71
SCARB2-220ENST00000640076 FBLN1P23142 703 aa10.62□□□□□ -0.71
SCARB2-220ENST00000640076 MTHFSP49914 203 aa10.62□□□□□ -0.71
SCARB2-220ENST00000640076 C1QBPQ07021 282 aaKnown RBP10.62□□□□□ -0.71
SCARB2-220ENST00000640076 DHX37Q8IY37 1157 aaKnown RBP10.62□□□□□ -0.71
SCARB2-220ENST00000640076 UBAP1LF5GYI3 381 aa10.61□□□□□ -0.71
SCARB2-220ENST00000640076 POLKQ9UBT6 870 aa10.61□□□□□ -0.71
SCARB2-220ENST00000640076 AHDC1Q5TGY3 1603 aaPredicted RBP10.61□□□□□ -0.71
SCARB2-220ENST00000640076 SMG6Q86US8 1419 aaKnown RBP10.61□□□□□ -0.71
SCARB2-220ENST00000640076 SPDYE16A6NNV3 312 aaPredicted RBP10.61□□□□□ -0.71
SCARB2-220ENST00000640076 GIGYF2Q6Y7W6 1299 aaKnown RBP10.61□□□□□ -0.71
SCARB2-220ENST00000640076 PNISRQ8TF01 805 aaKnown RBP10.61□□□□□ -0.71
SCARB2-220ENST00000640076 USP19O94966 1318 aa10.6□□□□□ -0.71
SCARB2-220ENST00000640076 ARHGEF10O15013 1369 aa10.6□□□□□ -0.71
SCARB2-220ENST00000640076 SLIT3O75094 1523 aa10.6□□□□□ -0.71
SCARB2-220ENST00000640076 PDIA6Q15084 440 aa10.6□□□□□ -0.71
SCARB2-220ENST00000640076 CCDC27Q2M243 656 aa10.6□□□□□ -0.71
SCARB2-220ENST00000640076 OXER1Q8TDS5 423 aa10.6□□□□□ -0.71
SCARB2-220ENST00000640076 SPDYE5A6NIY4 337 aa10.59□□□□□ -0.71
SCARB2-220ENST00000640076 PIP4K2BP78356 416 aa10.59□□□□□ -0.71
SCARB2-220ENST00000640076 RRS1Q15050 365 aaKnown RBP10.59□□□□□ -0.71
SCARB2-220ENST00000640076 NFAT5O94916 1531 aa10.59□□□□□ -0.71
SCARB2-220ENST00000640076 PNPLA6Q8IY17 1366 aa10.59□□□□□ -0.71
SCARB2-220ENST00000640076 MED1Q15648 1581 aaPredicted RBP10.59□□□□□ -0.71
SCARB2-220ENST00000640076 FAM177A1Q8N128 213 aaPredicted RBP10.59□□□□□ -0.71
SCARB2-220ENST00000640076 EMILIN1Q9Y6C2 1016 aa10.59□□□□□ -0.71
SCARB2-220ENST00000640076 CDK12Q9NYV4 1490 aaPredicted RBP10.59□□□□□ -0.71
SCARB2-220ENST00000640076 GNPATO15228 680 aa10.58□□□□□ -0.72
SCARB2-220ENST00000640076 FAM9BQ8IZU0 186 aa10.58□□□□□ -0.72
SCARB2-220ENST00000640076 KCNH5Q8NCM2 988 aa10.58□□□□□ -0.72
SCARB2-220ENST00000640076 CFAP53Q96M91 514 aa10.58□□□□□ -0.72
SCARB2-220ENST00000640076 COL3A1P02461 1466 aaPredicted RBP10.58□□□□□ -0.72
SCARB2-220ENST00000640076 MAP3K19Q56UN5 1328 aa10.58□□□□□ -0.72
SCARB2-220ENST00000640076 CRYBG1Q9Y4K1 1723 aa10.58□□□□□ -0.72
SCARB2-220ENST00000640076 INSRP06213 1382 aa10.58□□□□□ -0.72
SCARB2-220ENST00000640076 DPYSL4O14531 572 aa10.57□□□□□ -0.72
SCARB2-220ENST00000640076 PPM1GO15355 546 aaPredicted RBP10.57□□□□□ -0.72
SCARB2-220ENST00000640076 GCP02774 474 aa10.57□□□□□ -0.72
SCARB2-220ENST00000640076 PEAK1Q9H792 1746 aa10.57□□□□□ -0.72
SCARB2-220ENST00000640076 PHRF1Q9P1Y6 1649 aaKnown RBP10.57□□□□□ -0.72
SCARB2-220ENST00000640076 PHLPP1O60346 1717 aa10.57□□□□□ -0.72
SCARB2-220ENST00000640076 SKIV2LQ15477 1246 aaKnown RBP10.57□□□□□ -0.72
SCARB2-220ENST00000640076 SPDYE1Q8NFV5 336 aaPredicted RBP10.57□□□□□ -0.72
SCARB2-220ENST00000640076 SHPRHQ149N8 1683 aa10.57□□□□□ -0.72
SCARB2-220ENST00000640076 LTN1O94822 1766 aa10.56□□□□□ -0.72
SCARB2-220ENST00000640076 LRRC59Q96AG4 307 aaKnown RBP10.56□□□□□ -0.72
SCARB2-220ENST00000640076 COL16A1Q07092 1604 aaPredicted RBP10.56□□□□□ -0.72
SCARB2-220ENST00000640076 PRR29P0C7W0 189 aa10.56□□□□□ -0.72
SCARB2-220ENST00000640076 KIF24Q5T7B8 1368 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms