RNA–Protein interactions for RNA: ENST00000640011.1

PRKCH-228, Transcript of protein kinase C eta, humanhuman

TSL 5 BASIC

Gene PRKCH, Length 285 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-228ENST00000640011 SLC15A2Q16348 729 aa9.05□□□□□ -0.96
PRKCH-228ENST00000640011 SRPK2P78362 688 aaKnown RBP9.04□□□□□ -0.96
PRKCH-228ENST00000640011 TXNRD1Q16881 649 aa9.04□□□□□ -0.96
PRKCH-228ENST00000640011 KCNH5Q8NCM2 988 aa9.04□□□□□ -0.96
PRKCH-228ENST00000640011 FHDC1Q9C0D6 1143 aaPredicted RBP9.04□□□□□ -0.96
PRKCH-228ENST00000640011 WDR17Q8IZU2 1322 aa9.04□□□□□ -0.96
PRKCH-228ENST00000640011 MAP3K5Q99683 1374 aa9.03□□□□□ -0.96
PRKCH-228ENST00000640011 EXOC5O00471 708 aa9.03□□□□□ -0.96
PRKCH-228ENST00000640011 NLRP6P59044 892 aa9.03□□□□□ -0.96
PRKCH-228ENST00000640011 IFFO2Q5TF58 517 aa9.03□□□□□ -0.96
PRKCH-228ENST00000640011 PPIP5K1Q6PFW1 1433 aa9.03□□□□□ -0.96
PRKCH-228ENST00000640011 CASZ1Q86V15 1759 aa9.02□□□□□ -0.97
PRKCH-228ENST00000640011 TOPAZ1Q8N9V7 1692 aa9.02□□□□□ -0.97
PRKCH-228ENST00000640011 MARCH10Q8NA82 808 aaPredicted RBP9.02□□□□□ -0.97
PRKCH-228ENST00000640011 ARXQ96QS3 562 aa9.02□□□□□ -0.97
PRKCH-228ENST00000640011 CARD10Q9BWT7 1032 aa9.02□□□□□ -0.97
PRKCH-228ENST00000640011 ARHGEF28Q8N1W1 1705 aaKnown RBP9.02□□□□□ -0.97
PRKCH-228ENST00000640011 PEAK1Q9H792 1746 aa9.02□□□□□ -0.97
PRKCH-228ENST00000640011 CCDC7Q96M83 1385 aa9.01□□□□□ -0.97
PRKCH-228ENST00000640011 ZBTB7CA1YPR0 619 aa9.01□□□□□ -0.97
PRKCH-228ENST00000640011 GIGYF1O75420 1035 aaPredicted RBP9.01□□□□□ -0.97
PRKCH-228ENST00000640011 CSB-PGBD3P0DP91 1061 aa9.01□□□□□ -0.97
PRKCH-228ENST00000640011 TRPC6Q9Y210 931 aa9.01□□□□□ -0.97
PRKCH-228ENST00000640011 LRRC37A3O60309 1634 aa9.01□□□□□ -0.97
PRKCH-228ENST00000640011 RAB3GAP2Q9H2M9 1393 aa9□□□□□ -0.97
PRKCH-228ENST00000640011 USP6P35125 1406 aa9□□□□□ -0.97
PRKCH-228ENST00000640011 GPR162Q16538 588 aa9□□□□□ -0.97
PRKCH-228ENST00000640011 SLC16A10Q8TF71 515 aa9□□□□□ -0.97
PRKCH-228ENST00000640011 PDGFDQ9GZP0 370 aaPredicted RBP9□□□□□ -0.97
PRKCH-228ENST00000640011 CENPJQ9HC77 1338 aaPredicted RBP9□□□□□ -0.97
PRKCH-228ENST00000640011 SLIT3O75094 1523 aa9□□□□□ -0.97
PRKCH-228ENST00000640011 CPSF1Q10570 1443 aaKnown RBP8.99□□□□□ -0.97
PRKCH-228ENST00000640011 POLD1P28340 1107 aa8.99□□□□□ -0.97
PRKCH-228ENST00000640011 EVX2Q03828 476 aa8.99□□□□□ -0.97
PRKCH-228ENST00000640011 ARHGEF25Q86VW2 580 aa8.99□□□□□ -0.97
PRKCH-228ENST00000640011 MS4A3Q96HJ5 214 aa8.99□□□□□ -0.97
PRKCH-228ENST00000640011 MFRPQ9BY79 579 aa8.99□□□□□ -0.97
PRKCH-228ENST00000640011 CABP1Q9NZU7 370 aa8.99□□□□□ -0.97
PRKCH-228ENST00000640011 MYOM1P52179 1685 aa8.98□□□□□ -0.97
PRKCH-228ENST00000640011 HMGB2P26583 209 aaKnown RBP8.98□□□□□ -0.97
PRKCH-228ENST00000640011 PTF1AQ7RTS3 328 aa8.98□□□□□ -0.97
PRKCH-228ENST00000640011 EFCAB3Q8N7B9 438 aa8.98□□□□□ -0.97
PRKCH-228ENST00000640011 CABP2Q9NPB3 220 aa8.98□□□□□ -0.97
PRKCH-228ENST00000640011 AXIN2Q9Y2T1 843 aa8.98□□□□□ -0.97
PRKCH-228ENST00000640011 TTC21AQ8NDW8 1320 aa8.98□□□□□ -0.97
PRKCH-228ENST00000640011 TNS2Q63HR2 1409 aa8.97□□□□□ -0.97
PRKCH-228ENST00000640011 ABCC6O95255 1503 aa8.97□□□□□ -0.97
PRKCH-228ENST00000640011 EVC2Q86UK5 1308 aa8.97□□□□□ -0.97
PRKCH-228ENST00000640011 GOLGB1Q14789 3259 aaKnown RBP8.97□□□□□ -0.97
PRKCH-228ENST00000640011 SBF2Q86WG5 1849 aa8.96□□□□□ -0.97
PRKCH-228ENST00000640011 GRIN3BO60391 1043 aa8.96□□□□□ -0.98
PRKCH-228ENST00000640011 SLC27A3Q5K4L6 730 aa8.96□□□□□ -0.98
PRKCH-228ENST00000640011 KIAA1210Q9ULL0 1709 aa8.96□□□□□ -0.98
PRKCH-228ENST00000640011 IL2RBP14784 551 aa8.95□□□□□ -0.98
PRKCH-228ENST00000640011 TTC21BQ7Z4L5 1316 aa8.95□□□□□ -0.98
PRKCH-228ENST00000640011 CHD4Q14839 1912 aa8.95□□□□□ -0.98
PRKCH-228ENST00000640011 AKAP12Q02952 1782 aa8.94□□□□□ -0.98
PRKCH-228ENST00000640011 NBPF1Q3BBV0 1214 aa8.94□□□□□ -0.98
PRKCH-228ENST00000640011 TRPM1Q7Z4N2 1603 aa8.94□□□□□ -0.98
PRKCH-228ENST00000640011 CEP350Q5VT06 3117 aa8.94□□□□□ -0.98
PRKCH-228ENST00000640011 PPP1R37O75864 691 aa8.93□□□□□ -0.98
PRKCH-228ENST00000640011 FBXO22Q8NEZ5 403 aa8.93□□□□□ -0.98
PRKCH-228ENST00000640011 ACSBG1Q96GR2 724 aa8.93□□□□□ -0.98
PRKCH-228ENST00000640011 RYDENQ9NUL5 291 aaKnown RBP8.93□□□□□ -0.98
PRKCH-228ENST00000640011 ERBB3P21860 1342 aa8.93□□□□□ -0.98
PRKCH-228ENST00000640011 WNK3Q9BYP7 1800 aa8.92□□□□□ -0.98
PRKCH-228ENST00000640011 COL18A1P39060 1754 aa8.92□□□□□ -0.98
PRKCH-228ENST00000640011 NHSQ6T4R5 1651 aa8.92□□□□□ -0.98
PRKCH-228ENST00000640011 QRICH2Q9H0J4 1663 aa8.92□□□□□ -0.98
PRKCH-228ENST00000640011 HAX1O00165 279 aa8.92□□□□□ -0.98
PRKCH-228ENST00000640011 PELP1Q8IZL8 1130 aaKnown RBP8.92□□□□□ -0.98
PRKCH-228ENST00000640011 NLRP2Q9NX02 1062 aa8.92□□□□□ -0.98
PRKCH-228ENST00000640011 TFCP2L1Q9NZI6 479 aa8.92□□□□□ -0.98
PRKCH-228ENST00000640011 PIK3C2AO00443 1686 aa8.91□□□□□ -0.98
PRKCH-228ENST00000640011 SOX12O15370 315 aa8.91□□□□□ -0.98
PRKCH-228ENST00000640011 ZNF827Q17R98 1081 aa8.91□□□□□ -0.98
PRKCH-228ENST00000640011 TMEM106CQ9BVX2 250 aa8.91□□□□□ -0.98
PRKCH-228ENST00000640011 LRRC4BQ9NT99 713 aa8.91□□□□□ -0.98
PRKCH-228ENST00000640011 PAPPAQ13219 1627 aa8.91□□□□□ -0.98
PRKCH-228ENST00000640011 KTN1Q86UP2 1357 aaKnown RBP8.9□□□□□ -0.98
PRKCH-228ENST00000640011 GALR2O43603 387 aaPredicted RBP8.9□□□□□ -0.98
PRKCH-228ENST00000640011 NFAT5O94916 1531 aa8.9□□□□□ -0.99
PRKCH-228ENST00000640011 USP31Q70CQ4 1352 aa8.89□□□□□ -0.99
PRKCH-228ENST00000640011 PNPLA7Q6ZV29 1317 aa8.89□□□□□ -0.99
PRKCH-228ENST00000640011 GPBP1L1Q9HC44 474 aaPredicted RBP8.89□□□□□ -0.99
PRKCH-228ENST00000640011 ANKRD24Q8TF21 1146 aa8.88□□□□□ -0.99
PRKCH-228ENST00000640011 MS4A4AQ96JQ5 239 aa8.88□□□□□ -0.99
PRKCH-228ENST00000640011 ANKRD36BQ8N2N9 1353 aa8.87□□□□□ -0.99
PRKCH-228ENST00000640011 TTLL13PA6NNM8 815 aa8.87□□□□□ -0.99
PRKCH-228ENST00000640011 HSPA6P17066 643 aa8.87□□□□□ -0.99
PRKCH-228ENST00000640011 HDGFL2Q7Z4V5 671 aaPredicted RBP8.87□□□□□ -0.99
PRKCH-228ENST00000640011 FLAD1Q8NFF5 587 aa8.87□□□□□ -0.99
PRKCH-228ENST00000640011 NLGN2Q8NFZ4 835 aa8.87□□□□□ -0.99
PRKCH-228ENST00000640011 SYTL4Q96C24 671 aaPredicted RBP8.87□□□□□ -0.99
PRKCH-228ENST00000640011 BMP2KQ9NSY1 1161 aaPredicted RBP8.87□□□□□ -0.99
PRKCH-228ENST00000640011 CD2APQ9Y5K6 639 aa8.87□□□□□ -0.99
PRKCH-228ENST00000640011 TIE1P35590 1138 aa8.86□□□□□ -0.99
PRKCH-228ENST00000640011 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.86□□□□□ -0.99
PRKCH-228ENST00000640011 DDX54Q8TDD1 881 aaKnown RBP8.86□□□□□ -0.99
PRKCH-228ENST00000640011 ROCK2O75116 1388 aaKnown RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms