RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-231ENST00000639599 ARXQ96QS3 562 aa20.37■□□□□ 0.85
TARDBP-231ENST00000639599 POLR3GLQ9BT43 218 aa20.37■□□□□ 0.85
TARDBP-231ENST00000639599 FLT4P35916 1363 aa20.36■□□□□ 0.85
TARDBP-231ENST00000639599 PCGF6Q9BYE7 350 aa20.36■□□□□ 0.85
TARDBP-231ENST00000639599 LRRC4BQ9NT99 713 aa20.36■□□□□ 0.85
TARDBP-231ENST00000639599 TIMELESSQ9UNS1 1208 aa20.36■□□□□ 0.85
TARDBP-231ENST00000639599 PPM1GO15355 546 aaPredicted RBP20.35■□□□□ 0.85
TARDBP-231ENST00000639599 NBPF6Q5VWK0 638 aa20.35■□□□□ 0.85
TARDBP-231ENST00000639599 NBPF4Q96M43 638 aa20.35■□□□□ 0.85
TARDBP-231ENST00000639599 SYT17Q9BSW7 474 aa20.35■□□□□ 0.85
TARDBP-231ENST00000639599 MEGF6O75095 1541 aa20.34■□□□□ 0.85
TARDBP-231ENST00000639599 MSH5O43196 834 aa20.34■□□□□ 0.85
TARDBP-231ENST00000639599 HMGB2P26583 209 aaKnown RBP20.34■□□□□ 0.85
TARDBP-231ENST00000639599 SLC16A10Q8TF71 515 aa20.34■□□□□ 0.85
TARDBP-231ENST00000639599 CCNL1Q9UK58 526 aaPredicted RBP20.34■□□□□ 0.85
TARDBP-231ENST00000639599 NSD3Q9BZ95 1437 aa20.34■□□□□ 0.85
TARDBP-231ENST00000639599 BTAF1O14981 1849 aa20.34■□□□□ 0.85
TARDBP-231ENST00000639599 PCDH11XQ9BZA7 1347 aa20.33■□□□□ 0.85
TARDBP-231ENST00000639599 PCDH11YQ9BZA8 1340 aa20.33■□□□□ 0.85
TARDBP-231ENST00000639599 MYOM1P52179 1685 aa20.33■□□□□ 0.85
TARDBP-231ENST00000639599 INSRP06213 1382 aa20.33■□□□□ 0.84
TARDBP-231ENST00000639599 KIF24Q5T7B8 1368 aa20.33■□□□□ 0.84
TARDBP-231ENST00000639599 HSP90AB2PQ58FF8 381 aa20.32■□□□□ 0.84
TARDBP-231ENST00000639599 AKT1S1Q96B36 256 aa20.32■□□□□ 0.84
TARDBP-231ENST00000639599 CLSPNQ9HAW4 1339 aa20.3■□□□□ 0.84
TARDBP-231ENST00000639599 KCNQ4P56696 695 aa20.3■□□□□ 0.84
TARDBP-231ENST00000639599 PAPPAQ13219 1627 aa20.3■□□□□ 0.84
TARDBP-231ENST00000639599 SGIP1Q9BQI5 828 aa20.29■□□□□ 0.84
TARDBP-231ENST00000639599 GPR162Q16538 588 aa20.28■□□□□ 0.84
TARDBP-231ENST00000639599 EMILIN1Q9Y6C2 1016 aa20.28■□□□□ 0.84
TARDBP-231ENST00000639599 KAT6BQ8WYB5 2073 aa20.28■□□□□ 0.84
TARDBP-231ENST00000639599 PNPLA7Q6ZV29 1317 aa20.27■□□□□ 0.84
TARDBP-231ENST00000639599 PELP1Q8IZL8 1130 aaKnown RBP20.27■□□□□ 0.84
TARDBP-231ENST00000639599 DOT1LQ8TEK3 1739 aa20.27■□□□□ 0.83
TARDBP-231ENST00000639599 NSD2O96028 1365 aa20.26■□□□□ 0.83
TARDBP-231ENST00000639599 CARD14Q9BXL6 1004 aa20.26■□□□□ 0.83
TARDBP-231ENST00000639599 MPRIPQ6WCQ1 1025 aa20.25■□□□□ 0.83
TARDBP-231ENST00000639599 SPG7Q9UQ90 795 aa20.25■□□□□ 0.83
TARDBP-231ENST00000639599 KIF20BQ96Q89 1820 aa20.25■□□□□ 0.83
TARDBP-231ENST00000639599 MAP3K5Q99683 1374 aa20.24■□□□□ 0.83
TARDBP-231ENST00000639599 PALLDQ8WX93 1383 aa20.23■□□□□ 0.83
TARDBP-231ENST00000639599 SMARCC1Q92922 1105 aaPredicted RBP20.23■□□□□ 0.83
TARDBP-231ENST00000639599 EIF4G2P78344 907 aaKnown RBP eCLIP20.22■□□□□ 0.838e-11■■□□□ 12.1
TARDBP-231ENST00000639599 TNNT2P45379 298 aaPredicted RBP20.21■□□□□ 0.83
TARDBP-231ENST00000639599 FLAD1Q8NFF5 587 aa20.21■□□□□ 0.83
TARDBP-231ENST00000639599 AK7Q96M32 723 aa20.21■□□□□ 0.83
TARDBP-231ENST00000639599 RGPD2P0DJD1 1756 aa20.2■□□□□ 0.82
TARDBP-231ENST00000639599 WASHC2AQ641Q2 1341 aa20.2■□□□□ 0.82
TARDBP-231ENST00000639599 CYP27B1O15528 508 aa20.19■□□□□ 0.82
TARDBP-231ENST00000639599 CCER1Q8TC90 406 aaPredicted RBP20.19■□□□□ 0.82
TARDBP-231ENST00000639599 MSL1Q68DK7 614 aa20.18■□□□□ 0.82
TARDBP-231ENST00000639599 COL23A1Q86Y22 540 aaPredicted RBP20.17■□□□□ 0.82
TARDBP-231ENST00000639599 ZNF784Q8NCA9 323 aaPredicted RBP20.17■□□□□ 0.82
TARDBP-231ENST00000639599 TMOD3Q9NYL9 352 aa20.17■□□□□ 0.82
TARDBP-231ENST00000639599 SHANK3Q9BYB0 1731 aa20.16■□□□□ 0.82
TARDBP-231ENST00000639599 EYA1Q99502 592 aa20.16■□□□□ 0.82
TARDBP-231ENST00000639599 IFNL2Q8IZJ0 200 aa20.15■□□□□ 0.82
TARDBP-231ENST00000639599 POLKQ9UBT6 870 aa20.15■□□□□ 0.82
TARDBP-231ENST00000639599 LY75O60449 1722 aa20.14■□□□□ 0.81
TARDBP-231ENST00000639599 PHF14O94880 888 aa20.14■□□□□ 0.81
TARDBP-231ENST00000639599 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.14■□□□□ 0.813e-7■■□□□ 13.6
TARDBP-231ENST00000639599 QSER1Q2KHR3 1735 aa20.13■□□□□ 0.81
TARDBP-231ENST00000639599 HSPA5P11021 654 aaKnown RBP20.13■□□□□ 0.81
TARDBP-231ENST00000639599 PIGBQ92521 554 aa20.13■□□□□ 0.81
TARDBP-231ENST00000639599 NLGN2Q8NFZ4 835 aa20.12■□□□□ 0.81
TARDBP-231ENST00000639599 GRIN3BO60391 1043 aa20.11■□□□□ 0.81
TARDBP-231ENST00000639599 EIF4A2Q14240 407 aaKnown RBP20.11■□□□□ 0.81
TARDBP-231ENST00000639599 NKX1-1Q15270 411 aaPredicted RBP20.11■□□□□ 0.81
TARDBP-231ENST00000639599 PANK3Q9H999 370 aa20.11■□□□□ 0.81
TARDBP-231ENST00000639599 HSP90AB1P08238 724 aaKnown RBP20.1■□□□□ 0.81
TARDBP-231ENST00000639599 PHKG2P15735 406 aa20.1■□□□□ 0.81
TARDBP-231ENST00000639599 NCAPD2Q15021 1401 aa20.1■□□□□ 0.81
TARDBP-231ENST00000639599 LOC102724428A0A0B4J2F2 783 aa20.09■□□□□ 0.81
TARDBP-231ENST00000639599 SIK1P57059 783 aa20.09■□□□□ 0.81
TARDBP-231ENST00000639599 MORC1Q86VD1 984 aa20.09■□□□□ 0.81
TARDBP-231ENST00000639599 ATP6V1AP38606 617 aa20.08■□□□□ 0.81
TARDBP-231ENST00000639599 KNSTRNQ9Y448 316 aa20.08■□□□□ 0.81
TARDBP-231ENST00000639599 C5P01031 1676 aa20.07■□□□□ 0.8
TARDBP-231ENST00000639599 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.07■□□□□ 0.8
TARDBP-231ENST00000639599 SSFA2P28290 1259 aa20.07■□□□□ 0.8
TARDBP-231ENST00000639599 PLEKHO1Q53GL0 409 aaPredicted RBP20.07■□□□□ 0.8
TARDBP-231ENST00000639599 PKD1L3Q7Z443 1732 aa20.07■□□□□ 0.8
TARDBP-231ENST00000639599 GNPATO15228 680 aa20.06■□□□□ 0.8
TARDBP-231ENST00000639599 CD2APQ9Y5K6 639 aa20.06■□□□□ 0.8
TARDBP-231ENST00000639599 PLEKHG2Q9H7P9 1386 aa20.06■□□□□ 0.8
TARDBP-231ENST00000639599 TUBGCP6Q96RT7 1819 aa20.05■□□□□ 0.8
TARDBP-231ENST00000639599 C1orf141Q5JVX7 400 aa20.05■□□□□ 0.8
TARDBP-231ENST00000639599 ASAP1Q9ULH1 1129 aa20.05■□□□□ 0.8
TARDBP-231ENST00000639599 ANKRD26Q9UPS8 1709 aa20.05■□□□□ 0.8
TARDBP-231ENST00000639599 IGSF1Q8N6C5 1336 aa20.04■□□□□ 0.8
TARDBP-231ENST00000639599 AMOTQ4VCS5 1084 aa20.04■□□□□ 0.8
TARDBP-231ENST00000639599 ZNF530Q6P9A1 599 aaPredicted RBP20.04■□□□□ 0.8
TARDBP-231ENST00000639599 RBM42Q9BTD8 480 aaKnown RBP20.04■□□□□ 0.8
TARDBP-231ENST00000639599 C4BP0C0L5 1744 aa20.03■□□□□ 0.8
TARDBP-231ENST00000639599 GIGYF1O75420 1035 aaPredicted RBP20.03■□□□□ 0.8
TARDBP-231ENST00000639599 LINC00116Q8NCU8 138 aa20.03■□□□□ 0.8
TARDBP-231ENST00000639599 DCAF5Q96JK2 942 aa20.03■□□□□ 0.8
TARDBP-231ENST00000639599 TOGARAM1Q9Y4F4 1720 aa20.02■□□□□ 0.8
TARDBP-231ENST00000639599 CABP4P57796 275 aa20.02■□□□□ 0.8
TARDBP-231ENST00000639599 SENP3-EIF4A1A0A087X0R7 540 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms