RNA–Protein interactions for RNA: ENST00000639276.1

NECAP1-217, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,646 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-217ENST00000639276 ZBTB47Q9UFB7 747 aaPredicted RBP11.36□□□□□ -0.59
NECAP1-217ENST00000639276 KDRP35968 1356 aa11.36□□□□□ -0.59
NECAP1-217ENST00000639276 CRB1P82279 1406 aa11.36□□□□□ -0.59
NECAP1-217ENST00000639276 ZBTB7BO15156 539 aaPredicted RBP11.35□□□□□ -0.59
NECAP1-217ENST00000639276 RTF1Q92541 710 aaKnown RBP11.35□□□□□ -0.59
NECAP1-217ENST00000639276 HSPA2P54652 639 aa11.34□□□□□ -0.59
NECAP1-217ENST00000639276 NBPF6Q5VWK0 638 aa11.34□□□□□ -0.59
NECAP1-217ENST00000639276 DDX17Q92841 729 aaKnown RBP11.34□□□□□ -0.59
NECAP1-217ENST00000639276 NBPF4Q96M43 638 aa11.34□□□□□ -0.59
NECAP1-217ENST00000639276 LRRC59Q96AG4 307 aaKnown RBP11.34□□□□□ -0.59
NECAP1-217ENST00000639276 NWD1Q149M9 1564 aa11.34□□□□□ -0.59
NECAP1-217ENST00000639276 SLC4A3P48751 1232 aa11.33□□□□□ -0.6
NECAP1-217ENST00000639276 HDAC1Q13547 482 aaPredicted RBP11.33□□□□□ -0.6
NECAP1-217ENST00000639276 ARHGAP45Q92619 1136 aa11.33□□□□□ -0.6
NECAP1-217ENST00000639276 TSPYL4Q9UJ04 414 aa11.33□□□□□ -0.6
NECAP1-217ENST00000639276 IL17REQ8NFR9 667 aa11.32□□□□□ -0.6
NECAP1-217ENST00000639276 IP6K1Q92551 441 aa11.32□□□□□ -0.6
NECAP1-217ENST00000639276 LTN1O94822 1766 aa11.32□□□□□ -0.6
NECAP1-217ENST00000639276 ABCC4O15439 1325 aa11.32□□□□□ -0.6
NECAP1-217ENST00000639276 GAS2L2Q8NHY3 880 aa11.32□□□□□ -0.6
NECAP1-217ENST00000639276 GNAT3A8MTJ3 354 aa11.31□□□□□ -0.6
NECAP1-217ENST00000639276 GCP02774 474 aa11.31□□□□□ -0.6
NECAP1-217ENST00000639276 SIRT2Q8IXJ6 389 aa11.31□□□□□ -0.6
NECAP1-217ENST00000639276 NECTIN2Q92692 538 aa11.31□□□□□ -0.6
NECAP1-217ENST00000639276 KDM4FA0A1W2PPD8 638 aa11.31□□□□□ -0.6
NECAP1-217ENST00000639276 SLC4A2P04920 1241 aa11.31□□□□□ -0.6
NECAP1-217ENST00000639276 G2E3Q7L622 706 aa11.31□□□□□ -0.6
NECAP1-217ENST00000639276 KRT28Q7Z3Y7 464 aa11.31□□□□□ -0.6
NECAP1-217ENST00000639276 ILDR1Q86SU0 546 aaPredicted RBP11.31□□□□□ -0.6
NECAP1-217ENST00000639276 SMC5Q8IY18 1101 aa11.31□□□□□ -0.6
NECAP1-217ENST00000639276 NFAT5O94916 1531 aa11.31□□□□□ -0.6
NECAP1-217ENST00000639276 C19orf44Q9H6X5 657 aa11.3□□□□□ -0.6
NECAP1-217ENST00000639276 ARXQ96QS3 562 aa11.3□□□□□ -0.6
NECAP1-217ENST00000639276 AXIN2Q9Y2T1 843 aa11.3□□□□□ -0.6
NECAP1-217ENST00000639276 USP19O94966 1318 aa11.3□□□□□ -0.6
NECAP1-217ENST00000639276 MSH6P52701 1360 aa11.3□□□□□ -0.6
NECAP1-217ENST00000639276 KIF24Q5T7B8 1368 aa11.3□□□□□ -0.6
NECAP1-217ENST00000639276 USP54Q70EL1 1684 aa11.3□□□□□ -0.6
NECAP1-217ENST00000639276 NBR1Q14596 966 aa11.29□□□□□ -0.6
NECAP1-217ENST00000639276 API5Q9BZZ5 524 aaKnown RBP11.29□□□□□ -0.6
NECAP1-217ENST00000639276 LNPKQ9C0E8 428 aa11.29□□□□□ -0.6
NECAP1-217ENST00000639276 BCL11AQ9H165 835 aa11.29□□□□□ -0.6
NECAP1-217ENST00000639276 KIAA0232Q92628 1395 aa11.29□□□□□ -0.6
NECAP1-217ENST00000639276 RGPD2P0DJD1 1756 aa11.29□□□□□ -0.6
NECAP1-217ENST00000639276 KCNH5Q8NCM2 988 aa11.29□□□□□ -0.6
NECAP1-217ENST00000639276 LGR6Q9HBX8 967 aa11.29□□□□□ -0.6
NECAP1-217ENST00000639276 F6X3S4 739 aa11.28□□□□□ -0.6
NECAP1-217ENST00000639276 TMEM94Q12767 1356 aa11.28□□□□□ -0.6
NECAP1-217ENST00000639276 RGS12O14924 1447 aa11.28□□□□□ -0.6
NECAP1-217ENST00000639276 C1orf167Q5SNV9 1468 aa11.28□□□□□ -0.6
NECAP1-217ENST00000639276 ZC3H6P61129 1189 aaKnown RBP11.28□□□□□ -0.6
NECAP1-217ENST00000639276 ARHGEF25Q86VW2 580 aa11.28□□□□□ -0.6
NECAP1-217ENST00000639276 MAP3K5Q99683 1374 aa11.27□□□□□ -0.6
NECAP1-217ENST00000639276 RTL1A6NKG5 1358 aa11.27□□□□□ -0.61
NECAP1-217ENST00000639276 NUCB1Q02818 461 aa11.27□□□□□ -0.61
NECAP1-217ENST00000639276 STRCP1A6NGW2 1772 aa11.27□□□□□ -0.61
NECAP1-217ENST00000639276 ATF3P18847 181 aa11.26□□□□□ -0.61
NECAP1-217ENST00000639276 ANKRD45Q5TZF3 282 aa11.26□□□□□ -0.61
NECAP1-217ENST00000639276 INTS3Q68E01 1043 aaKnown RBP11.26□□□□□ -0.61
NECAP1-217ENST00000639276 SLC4A10Q6U841 1118 aa11.26□□□□□ -0.61
NECAP1-217ENST00000639276 HTATSF1O43719 755 aaKnown RBP11.26□□□□□ -0.61
NECAP1-217ENST00000639276 CHD1LQ86WJ1 897 aa11.26□□□□□ -0.61
NECAP1-217ENST00000639276 CABLES1Q8TDN4 633 aa11.26□□□□□ -0.61
NECAP1-217ENST00000639276 TAF7Q15545 349 aaPredicted RBP11.25□□□□□ -0.61
NECAP1-217ENST00000639276 ANKRD24Q8TF21 1146 aa11.25□□□□□ -0.61
NECAP1-217ENST00000639276 MEIS3Q99687 375 aa11.25□□□□□ -0.61
NECAP1-217ENST00000639276 KCNQ3O43525 872 aa11.25□□□□□ -0.61
NECAP1-217ENST00000639276 MPRIPQ6WCQ1 1025 aa11.25□□□□□ -0.61
NECAP1-217ENST00000639276 VIRMAQ69YN4 1812 aaKnown RBP11.25□□□□□ -0.61
NECAP1-217ENST00000639276 HAP1P54257 671 aaPredicted RBP11.24□□□□□ -0.61
NECAP1-217ENST00000639276 DDRGK1Q96HY6 314 aa11.23□□□□□ -0.61
NECAP1-217ENST00000639276 TRPM3Q9HCF6 1732 aaPredicted RBP11.23□□□□□ -0.61
NECAP1-217ENST00000639276 PTPRCP08575 1304 aa11.23□□□□□ -0.61
NECAP1-217ENST00000639276 MST1RQ04912 1400 aa11.23□□□□□ -0.61
NECAP1-217ENST00000639276 ZNF530Q6P9A1 599 aaPredicted RBP11.23□□□□□ -0.61
NECAP1-217ENST00000639276 CHMP4BQ9H444 224 aaKnown RBP11.22□□□□□ -0.61
NECAP1-217ENST00000639276 LRRC37A3O60309 1634 aa11.22□□□□□ -0.61
NECAP1-217ENST00000639276 SLIT3O75094 1523 aa11.22□□□□□ -0.61
NECAP1-217ENST00000639276 STK31Q9BXU1 1019 aa11.22□□□□□ -0.61
NECAP1-217ENST00000639276 RGPD5Q99666 1765 aa11.22□□□□□ -0.61
NECAP1-217ENST00000639276 APBB1O00213 710 aa11.22□□□□□ -0.61
NECAP1-217ENST00000639276 EIF2S2P20042 333 aaKnown RBP11.22□□□□□ -0.61
NECAP1-217ENST00000639276 FLIIQ13045 1269 aa11.22□□□□□ -0.61
NECAP1-217ENST00000639276 GCC1Q96CN9 775 aa11.22□□□□□ -0.61
NECAP1-217ENST00000639276 PHAXQ9H814 394 aaKnown RBP11.22□□□□□ -0.61
NECAP1-217ENST00000639276 CEMIPQ8WUJ3 1361 aa11.21□□□□□ -0.61
NECAP1-217ENST00000639276 FKBP5Q13451 457 aaPredicted RBP11.21□□□□□ -0.61
NECAP1-217ENST00000639276 CHRNA2Q15822 529 aa11.21□□□□□ -0.61
NECAP1-217ENST00000639276 CCDC30Q5VVM6 783 aa11.21□□□□□ -0.61
NECAP1-217ENST00000639276 CEP85Q6P2H3 762 aa11.21□□□□□ -0.61
NECAP1-217ENST00000639276 C16orf71Q8IYS4 520 aaPredicted RBP11.21□□□□□ -0.61
NECAP1-217ENST00000639276 PXDNQ92626 1479 aa11.21□□□□□ -0.61
NECAP1-217ENST00000639276 MFAP1P55081 439 aaKnown RBP11.21□□□□□ -0.62
NECAP1-217ENST00000639276 ATP10DQ9P241 1426 aa11.2□□□□□ -0.62
NECAP1-217ENST00000639276 MED1Q15648 1581 aaPredicted RBP11.2□□□□□ -0.62
NECAP1-217ENST00000639276 ANXA1P04083 346 aa11.2□□□□□ -0.62
NECAP1-217ENST00000639276 PLEKHO1Q53GL0 409 aaPredicted RBP11.2□□□□□ -0.62
NECAP1-217ENST00000639276 ANKRD44Q8N8A2 993 aa11.2□□□□□ -0.62
NECAP1-217ENST00000639276 EIF4A1P60842 406 aaKnown RBP11.2□□□□□ -0.62
NECAP1-217ENST00000639276 AKAP4Q5JQC9 854 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms