RNA–Protein interactions for RNA: ENST00000639145.1

SCARB2-215, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 4,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-215ENST00000639145 LRRC59Q96AG4 307 aaKnown RBP16.43■□□□□ 0.22
SCARB2-215ENST00000639145 TBX22Q9Y458 520 aa16.43■□□□□ 0.22
SCARB2-215ENST00000639145 PPIP5K1Q6PFW1 1433 aa16.43■□□□□ 0.22
SCARB2-215ENST00000639145 PRAG1Q86YV5 1406 aa16.43■□□□□ 0.22
SCARB2-215ENST00000639145 TCEAL9Q9UHQ7 104 aa16.42■□□□□ 0.22
SCARB2-215ENST00000639145 GOLGA6L3A6NEY3 463 aa16.41■□□□□ 0.22
SCARB2-215ENST00000639145 DCAF8L1A6NGE4 600 aa16.41■□□□□ 0.22
SCARB2-215ENST00000639145 DBF4Q9UBU7 674 aaPredicted RBP16.41■□□□□ 0.22
SCARB2-215ENST00000639145 RPAP2Q8IXW5 612 aaPredicted RBP16.41■□□□□ 0.22
SCARB2-215ENST00000639145 YEATS2Q9ULM3 1422 aa16.4■□□□□ 0.22
SCARB2-215ENST00000639145 TTC21AQ8NDW8 1320 aa16.4■□□□□ 0.22
SCARB2-215ENST00000639145 IGHMBP2P38935 993 aaKnown RBP16.4■□□□□ 0.22
SCARB2-215ENST00000639145 CHAF1AQ13111 956 aaPredicted RBP16.4■□□□□ 0.22
SCARB2-215ENST00000639145 ACSBG1Q96GR2 724 aa16.4■□□□□ 0.22
SCARB2-215ENST00000639145 ABCF2Q9UG63 623 aa16.4■□□□□ 0.22
SCARB2-215ENST00000639145 ZNF652Q9Y2D9 606 aa16.4■□□□□ 0.22
SCARB2-215ENST00000639145 TRMT112Q9UI30 125 aaKnown RBP16.4■□□□□ 0.22
SCARB2-215ENST00000639145 ABCC11Q96J66 1382 aa16.4■□□□□ 0.22
SCARB2-215ENST00000639145 ATP2B2Q01814 1243 aa16.4■□□□□ 0.22
SCARB2-215ENST00000639145 SLC39A6Q13433 755 aa16.4■□□□□ 0.22
SCARB2-215ENST00000639145 ORAI2Q96SN7 254 aa16.4■□□□□ 0.22
SCARB2-215ENST00000639145 ATP5J2-PTCD1G3V325 749 aa16.39■□□□□ 0.21
SCARB2-215ENST00000639145 ATP2B1P20020 1258 aa16.39■□□□□ 0.21
SCARB2-215ENST00000639145 RBM5P52756 815 aaKnown RBP eCLIP16.39■□□□□ 0.21
SCARB2-215ENST00000639145 NUTM1Q86Y26 1132 aa16.39■□□□□ 0.21
SCARB2-215ENST00000639145 POLKQ9UBT6 870 aa16.39■□□□□ 0.21
SCARB2-215ENST00000639145 NSD2O96028 1365 aa16.39■□□□□ 0.21
SCARB2-215ENST00000639145 KIAA2012Q0VF49 1180 aa16.39■□□□□ 0.21
SCARB2-215ENST00000639145 METTL24Q5JXM2 366 aa16.39■□□□□ 0.21
SCARB2-215ENST00000639145 CHD1LQ86WJ1 897 aa16.39■□□□□ 0.21
SCARB2-215ENST00000639145 BICD2Q8TD16 824 aa16.39■□□□□ 0.21
SCARB2-215ENST00000639145 DNAAF4Q8WXU2 420 aa16.39■□□□□ 0.21
SCARB2-215ENST00000639145 GCP02774 474 aa16.39■□□□□ 0.21
SCARB2-215ENST00000639145 ANKRD36BQ8N2N9 1353 aa16.39■□□□□ 0.21
SCARB2-215ENST00000639145 A0A087WZG4 1122 aa16.39■□□□□ 0.21
SCARB2-215ENST00000639145 CWC22Q9HCG8 908 aaKnown RBP16.39■□□□□ 0.21
SCARB2-215ENST00000639145 FLIIQ13045 1269 aa16.38■□□□□ 0.21
SCARB2-215ENST00000639145 SAFBQ15424 915 aaKnown RBP eCLIP16.38■□□□□ 0.21
SCARB2-215ENST00000639145 DDX11L8A8MPP1 907 aa16.38■□□□□ 0.21
SCARB2-215ENST00000639145 IDH1O75874 414 aaKnown RBP16.38■□□□□ 0.21
SCARB2-215ENST00000639145 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.38■□□□□ 0.21
SCARB2-215ENST00000639145 SART3Q15020 963 aaKnown RBP16.38■□□□□ 0.21
SCARB2-215ENST00000639145 ZCRB1Q8TBF4 217 aaKnown RBP16.38■□□□□ 0.21
SCARB2-215ENST00000639145 PSMA5P28066 241 aa16.37■□□□□ 0.21
SCARB2-215ENST00000639145 MBIPQ9NS73 344 aa16.37■□□□□ 0.21
SCARB2-215ENST00000639145 ATP10AO60312 1499 aa16.37■□□□□ 0.21
SCARB2-215ENST00000639145 EIF4A2Q14240 407 aaKnown RBP16.37■□□□□ 0.21
SCARB2-215ENST00000639145 TPD52L1Q16890 204 aaPredicted RBP16.37■□□□□ 0.21
SCARB2-215ENST00000639145 JARID2Q92833 1246 aaPredicted RBP16.37■□□□□ 0.21
SCARB2-215ENST00000639145 CHMP5Q9NZZ3 219 aa16.37■□□□□ 0.21
SCARB2-215ENST00000639145 RAI14Q9P0K7 980 aa16.37■□□□□ 0.21
SCARB2-215ENST00000639145 ZNF219Q9P2Y4 722 aaPredicted RBP16.37■□□□□ 0.21
SCARB2-215ENST00000639145 HIP1O00291 1037 aa16.37■□□□□ 0.21
SCARB2-215ENST00000639145 LRP2BPQ9P2M1 347 aa16.37■□□□□ 0.21
SCARB2-215ENST00000639145 PI4KAP2A4QPH2 592 aa16.36■□□□□ 0.21
SCARB2-215ENST00000639145 SMARCA5O60264 1052 aaPredicted RBP16.36■□□□□ 0.21
SCARB2-215ENST00000639145 PHF14O94880 888 aa16.36■□□□□ 0.21
SCARB2-215ENST00000639145 PI4KAP1Q8N8J0 262 aa16.36■□□□□ 0.21
SCARB2-215ENST00000639145 BECN2A8MW95 431 aa16.36■□□□□ 0.21
SCARB2-215ENST00000639145 BCL11BQ9C0K0 894 aaPredicted RBP16.36■□□□□ 0.21
SCARB2-215ENST00000639145 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.36■□□□□ 0.216e-6■■■■■ 38.2
SCARB2-215ENST00000639145 DDX17Q92841 729 aaKnown RBP16.35■□□□□ 0.21
SCARB2-215ENST00000639145 LRRFIP2Q9Y608 721 aaKnown RBP16.35■□□□□ 0.21
SCARB2-215ENST00000639145 CWC27Q6UX04 472 aaKnown RBP16.35■□□□□ 0.21
SCARB2-215ENST00000639145 HYPKQ9NX55 129 aa16.35■□□□□ 0.21
SCARB2-215ENST00000639145 TNNQ9UQP3 1299 aa16.35■□□□□ 0.21
SCARB2-215ENST00000639145 LMTK3Q96Q04 1460 aa16.35■□□□□ 0.21
SCARB2-215ENST00000639145 ALDH1L2Q3SY69 923 aa16.35■□□□□ 0.21
SCARB2-215ENST00000639145 MBD5Q9P267 1494 aa16.34■□□□□ 0.21
SCARB2-215ENST00000639145 PER1O15534 1290 aaPredicted RBP16.34■□□□□ 0.21
SCARB2-215ENST00000639145 PIP4K2AP48426 406 aaPredicted RBP16.34■□□□□ 0.21
SCARB2-215ENST00000639145 TRIM27P14373 513 aa16.34■□□□□ 0.21
SCARB2-215ENST00000639145 ZSCAN29Q8IWY8 852 aaPredicted RBP16.34■□□□□ 0.21
SCARB2-215ENST00000639145 DDB1Q16531 1140 aa16.34■□□□□ 0.21
SCARB2-215ENST00000639145 DNMT1P26358 1616 aaKnown RBP16.33■□□□□ 0.21
SCARB2-215ENST00000639145 PDE4CQ08493 712 aa16.33■□□□□ 0.21
SCARB2-215ENST00000639145 IFIT5Q13325 482 aaKnown RBP16.33■□□□□ 0.21
SCARB2-215ENST00000639145 UBE3BQ7Z3V4 1068 aa16.33■□□□□ 0.21
SCARB2-215ENST00000639145 NACAP1Q9BZK3 213 aa16.33■□□□□ 0.21
SCARB2-215ENST00000639145 RALGAPBQ86X10 1494 aa16.33■□□□□ 0.2
SCARB2-215ENST00000639145 MAP3K2Q9Y2U5 619 aa16.33■□□□□ 0.2
SCARB2-215ENST00000639145 SLC3A2P08195 630 aaKnown RBP16.33■□□□□ 0.2
SCARB2-215ENST00000639145 BOLA2Q9H3K6 86 aa16.33■□□□□ 0.2
SCARB2-215ENST00000639145 SNRPA1P09661 255 aaKnown RBP16.32■□□□□ 0.2
SCARB2-215ENST00000639145 KIF1BPQ96EK5 621 aa16.32■□□□□ 0.2
SCARB2-215ENST00000639145 AK7Q96M32 723 aa16.32■□□□□ 0.2
SCARB2-215ENST00000639145 YTHDC2Q9H6S0 1430 aaKnown RBP16.32■□□□□ 0.2
SCARB2-215ENST00000639145 GOLGA6L19H0YKK7 550 aa16.32■□□□□ 0.2
SCARB2-215ENST00000639145 KRT24Q2M2I5 525 aa16.32■□□□□ 0.2
SCARB2-215ENST00000639145 CCDC8Q9H0W5 538 aaPredicted RBP16.32■□□□□ 0.2
SCARB2-215ENST00000639145 LTKP29376 864 aa16.32■□□□□ 0.2
SCARB2-215ENST00000639145 ANO8Q9HCE9 1232 aaPredicted RBP16.31■□□□□ 0.2
SCARB2-215ENST00000639145 MAP3K19Q56UN5 1328 aa16.31■□□□□ 0.2
SCARB2-215ENST00000639145 NUCB2P80303 420 aa16.31■□□□□ 0.2
SCARB2-215ENST00000639145 STK3Q13188 491 aa16.31■□□□□ 0.2
SCARB2-215ENST00000639145 SHANK2Q9UPX8 1470 aa16.31■□□□□ 0.2
SCARB2-215ENST00000639145 ATP7AQ04656 1500 aa16.31■□□□□ 0.2
SCARB2-215ENST00000639145 ANKIB1Q9P2G1 1089 aa16.31■□□□□ 0.2
SCARB2-215ENST00000639145 EYA1Q99502 592 aa16.31■□□□□ 0.2
SCARB2-215ENST00000639145 HSP90AB3PQ58FF7 597 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms