RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 CDC14CA4D256 554 aa8.7□□□□□ -1.02
CCDC7-211ENST00000638889 ERVK-9P63128 1117 aa8.7□□□□□ -1.02
CCDC7-211ENST00000638889 KCNMA1Q12791 1236 aa8.7□□□□□ -1.02
CCDC7-211ENST00000638889 CC2D2BQ6DHV5 1058 aa8.7□□□□□ -1.02
CCDC7-211ENST00000638889 SLURP2P0DP57 97 aa8.69□□□□□ -1.02
CCDC7-211ENST00000638889 RNFT1Q5M7Z0 435 aa8.69□□□□□ -1.02
CCDC7-211ENST00000638889 NDUFB9Q9Y6M9 179 aa8.69□□□□□ -1.02
CCDC7-211ENST00000638889 GMCL1Q96IK5 515 aa8.68□□□□□ -1.02
CCDC7-211ENST00000638889 PRICKLE2Q7Z3G6 844 aa8.67□□□□□ -1.02
CCDC7-211ENST00000638889 MTMR14Q8NCE2 650 aa8.67□□□□□ -1.02
CCDC7-211ENST00000638889 A0A1W2PRU2 124 aa8.66□□□□□ -1.02
CCDC7-211ENST00000638889 GPR37L1O60883 481 aa8.66□□□□□ -1.02
CCDC7-211ENST00000638889 ZNF385CQ66K41 422 aaPredicted RBP8.66□□□□□ -1.02
CCDC7-211ENST00000638889 CYP2U1Q7Z449 544 aa8.66□□□□□ -1.02
CCDC7-211ENST00000638889 ADAMTS8Q9UP79 889 aa8.66□□□□□ -1.02
CCDC7-211ENST00000638889 MEN1O00255 615 aa8.65□□□□□ -1.02
CCDC7-211ENST00000638889 RNF225M0QZC1 329 aaPredicted RBP8.64□□□□□ -1.03
CCDC7-211ENST00000638889 CLN3Q13286 438 aa8.64□□□□□ -1.03
CCDC7-211ENST00000638889 SVOPQ8N4V2 548 aa8.64□□□□□ -1.03
CCDC7-211ENST00000638889 NLRP3Q96P20 1036 aa8.64□□□□□ -1.03
CCDC7-211ENST00000638889 PCDHB11Q9Y5F2 797 aa8.64□□□□□ -1.03
CCDC7-211ENST00000638889 TRAK2O60296 914 aa8.63□□□□□ -1.03
CCDC7-211ENST00000638889 WDR44Q5JSH3 913 aa8.63□□□□□ -1.03
CCDC7-211ENST00000638889 ESF1Q9H501 851 aaKnown RBP8.63□□□□□ -1.03
CCDC7-211ENST00000638889 SNRKQ9NRH2 765 aa8.63□□□□□ -1.03
CCDC7-211ENST00000638889 CUEDC1Q9NWM3 386 aaPredicted RBP8.63□□□□□ -1.03
CCDC7-211ENST00000638889 DYRK1BQ9Y463 629 aa8.63□□□□□ -1.03
CCDC7-211ENST00000638889 RHOQP17081 205 aa8.62□□□□□ -1.03
CCDC7-211ENST00000638889 SRSF11Q05519 484 aaKnown RBP8.62□□□□□ -1.03
CCDC7-211ENST00000638889 SLC27A3Q5K4L6 730 aa8.62□□□□□ -1.03
CCDC7-211ENST00000638889 TRIM22Q8IYM9 498 aa8.62□□□□□ -1.03
CCDC7-211ENST00000638889 GRIP2Q9C0E4 1043 aa8.62□□□□□ -1.03
CCDC7-211ENST00000638889 OSBPL3Q9H4L5 887 aa8.62□□□□□ -1.03
CCDC7-211ENST00000638889 SPATA31C2B4DYI2 1134 aa8.61□□□□□ -1.03
CCDC7-211ENST00000638889 H7C1W4 665 aa8.61□□□□□ -1.03
CCDC7-211ENST00000638889 ARHGEF15O94989 841 aa8.61□□□□□ -1.03
CCDC7-211ENST00000638889 SCTRP47872 440 aa8.61□□□□□ -1.03
CCDC7-211ENST00000638889 GSK3AP49840 483 aa8.61□□□□□ -1.03
CCDC7-211ENST00000638889 ADAMTS2O95450 1211 aa8.6□□□□□ -1.03
CCDC7-211ENST00000638889 GNRH1P01148 92 aa8.6□□□□□ -1.03
CCDC7-211ENST00000638889 FOXR1Q6PIV2 292 aa8.6□□□□□ -1.03
CCDC7-211ENST00000638889 WHAMMQ8TF30 809 aa8.6□□□□□ -1.03
CCDC7-211ENST00000638889 ZNF837Q96EG3 531 aaPredicted RBP8.6□□□□□ -1.03
CCDC7-211ENST00000638889 PRM3Q9NNZ6 103 aa8.6□□□□□ -1.03
CCDC7-211ENST00000638889 CEP126Q9P2H0 1117 aa8.6□□□□□ -1.03
CCDC7-211ENST00000638889 POU4F2Q12837 409 aa8.59□□□□□ -1.03
CCDC7-211ENST00000638889 GAS6Q14393 721 aa8.59□□□□□ -1.03
CCDC7-211ENST00000638889 MYCP01106 439 aaPredicted RBP8.58□□□□□ -1.04
CCDC7-211ENST00000638889 RASSF7Q02833 373 aa8.58□□□□□ -1.04
CCDC7-211ENST00000638889 DBN1Q16643 649 aa8.58□□□□□ -1.04
CCDC7-211ENST00000638889 NBPF10Q6P3W6 841 aaKnown RBP8.58□□□□□ -1.04
CCDC7-211ENST00000638889 RIPOR1Q6ZS17 1223 aa8.58□□□□□ -1.04
CCDC7-211ENST00000638889 TMEM151AQ8N4L1 468 aa8.58□□□□□ -1.04
CCDC7-211ENST00000638889 NBPF15Q8N660 670 aa8.58□□□□□ -1.04
CCDC7-211ENST00000638889 TPRNQ4KMQ1 711 aa8.57□□□□□ -1.04
CCDC7-211ENST00000638889 TAS1R3Q7RTX0 852 aa8.57□□□□□ -1.04
CCDC7-211ENST00000638889 ESYT1Q9BSJ8 1104 aa8.57□□□□□ -1.04
CCDC7-211ENST00000638889 ARHGEF10LQ9HCE6 1279 aa8.57□□□□□ -1.04
CCDC7-211ENST00000638889 MBIPQ9NS73 344 aa8.57□□□□□ -1.04
CCDC7-211ENST00000638889 GDF11O95390 407 aa8.56□□□□□ -1.04
CCDC7-211ENST00000638889 EIF4G2P78344 907 aaKnown RBP eCLIP8.56□□□□□ -1.04
CCDC7-211ENST00000638889 MAP3K10Q02779 954 aa8.56□□□□□ -1.04
CCDC7-211ENST00000638889 CCDC85AQ96PX6 553 aaPredicted RBP8.56□□□□□ -1.04
CCDC7-211ENST00000638889 GAS2L1Q99501 681 aaPredicted RBP8.56□□□□□ -1.04
CCDC7-211ENST00000638889 WASLO00401 505 aaPredicted RBP8.55□□□□□ -1.04
CCDC7-211ENST00000638889 CELA2BP08218 269 aaPredicted RBP8.55□□□□□ -1.04
CCDC7-211ENST00000638889 MARSP56192 900 aaKnown RBP8.55□□□□□ -1.04
CCDC7-211ENST00000638889 LYPD4Q6UWN0 246 aa8.55□□□□□ -1.04
CCDC7-211ENST00000638889 CNKSR1Q969H4 720 aa8.55□□□□□ -1.04
CCDC7-211ENST00000638889 SCARF2Q96GP6 870 aaPredicted RBP8.55□□□□□ -1.04
CCDC7-211ENST00000638889 TRERF1Q96PN7 1200 aa8.55□□□□□ -1.04
CCDC7-211ENST00000638889 TIMMDC1Q9NPL8 285 aa8.55□□□□□ -1.04
CCDC7-211ENST00000638889 ENAMQ9NRM1 1142 aa8.55□□□□□ -1.04
CCDC7-211ENST00000638889 F11P03951 625 aa8.54□□□□□ -1.04
CCDC7-211ENST00000638889 XAGE2Q96GT9 111 aa8.54□□□□□ -1.04
CCDC7-211ENST00000638889 TBC1D2BQ9UPU7 963 aa8.54□□□□□ -1.04
CCDC7-211ENST00000638889 IL2RAP01589 272 aa8.53□□□□□ -1.04
CCDC7-211ENST00000638889 CENPCQ03188 943 aa8.53□□□□□ -1.04
CCDC7-211ENST00000638889 KANK3Q6NY19 840 aa8.53□□□□□ -1.04
CCDC7-211ENST00000638889 KCTD17Q8N5Z5 321 aa8.53□□□□□ -1.04
CCDC7-211ENST00000638889 GTPBP3Q969Y2 492 aaKnown RBP8.53□□□□□ -1.04
CCDC7-211ENST00000638889 CDCA7Q9BWT1 371 aaPredicted RBP8.53□□□□□ -1.04
CCDC7-211ENST00000638889 RAB6BQ9NRW1 208 aa8.53□□□□□ -1.04
CCDC7-211ENST00000638889 HRH3Q9Y5N1 445 aa8.53□□□□□ -1.04
CCDC7-211ENST00000638889 IGF1RP08069 1367 aa8.52□□□□□ -1.05
CCDC7-211ENST00000638889 GPR25O00155 361 aa8.52□□□□□ -1.05
CCDC7-211ENST00000638889 USP4Q13107 963 aa8.52□□□□□ -1.05
CCDC7-211ENST00000638889 ESCO1Q5FWF5 840 aa8.52□□□□□ -1.05
CCDC7-211ENST00000638889 PHTF2Q8N3S3 785 aa8.52□□□□□ -1.05
CCDC7-211ENST00000638889 ZSCAN10Q96SZ4 725 aaPredicted RBP8.52□□□□□ -1.05
CCDC7-211ENST00000638889 NSFL1CQ9UNZ2 370 aaKnown RBP8.52□□□□□ -1.05
CCDC7-211ENST00000638889 GTF2E1P29083 439 aaPredicted RBP8.51□□□□□ -1.05
CCDC7-211ENST00000638889 IRF5Q13568 498 aa8.51□□□□□ -1.05
CCDC7-211ENST00000638889 SLFNL1Q499Z3 407 aa8.51□□□□□ -1.05
CCDC7-211ENST00000638889 SIRT1Q96EB6 747 aa8.51□□□□□ -1.05
CCDC7-211ENST00000638889 NUCKS1Q9H1E3 243 aaKnown RBP8.51□□□□□ -1.05
CCDC7-211ENST00000638889 LRRC4BQ9NT99 713 aa8.51□□□□□ -1.05
CCDC7-211ENST00000638889 A0A1B0GTH6 734 aa8.5□□□□□ -1.05
CCDC7-211ENST00000638889 IRS1P35568 1242 aa8.5□□□□□ -1.05
CCDC7-211ENST00000638889 CHIC2Q9UKJ5 165 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 853.1 ms