RNA–Protein interactions for RNA: ENST00000638843.1

SCARB2-214, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-214ENST00000638843 AMER1Q5JTC6 1135 aaPredicted RBP13.07□□□□□ -0.32
SCARB2-214ENST00000638843 INSRP06213 1382 aa13.06□□□□□ -0.32
SCARB2-214ENST00000638843 KIF24Q5T7B8 1368 aa13.05□□□□□ -0.32
SCARB2-214ENST00000638843 EN1Q05925 392 aaPredicted RBP13.05□□□□□ -0.32
SCARB2-214ENST00000638843 MORC1Q86VD1 984 aa13.05□□□□□ -0.32
SCARB2-214ENST00000638843 USHBP1Q8N6Y0 703 aa13.05□□□□□ -0.32
SCARB2-214ENST00000638843 LTN1O94822 1766 aa13.04□□□□□ -0.32
SCARB2-214ENST00000638843 RGPD5Q99666 1765 aa13.04□□□□□ -0.32
SCARB2-214ENST00000638843 BAG6P46379 1132 aa13.04□□□□□ -0.32
SCARB2-214ENST00000638843 NSD2O96028 1365 aa13.04□□□□□ -0.32
SCARB2-214ENST00000638843 PTF1AQ7RTS3 328 aa13.03□□□□□ -0.32
SCARB2-214ENST00000638843 OVOS2A0A0G2JMS6 1433 aa13.03□□□□□ -0.32
SCARB2-214ENST00000638843 APBA3O96018 575 aa13.03□□□□□ -0.32
SCARB2-214ENST00000638843 PARP4Q9UKK3 1724 aaKnown RBP13.02□□□□□ -0.33
SCARB2-214ENST00000638843 TNS2Q63HR2 1409 aa13.02□□□□□ -0.33
SCARB2-214ENST00000638843 SMG6Q86US8 1419 aaKnown RBP13.02□□□□□ -0.33
SCARB2-214ENST00000638843 LRRC37A3O60309 1634 aa13.01□□□□□ -0.33
SCARB2-214ENST00000638843 PEAK1Q9H792 1746 aa13.01□□□□□ -0.33
SCARB2-214ENST00000638843 KIF20BQ96Q89 1820 aa13.01□□□□□ -0.33
SCARB2-214ENST00000638843 EZH2Q15910 746 aaKnown RBP13.01□□□□□ -0.33
SCARB2-214ENST00000638843 CC2D1BQ5T0F9 858 aaKnown RBP13.01□□□□□ -0.33
SCARB2-214ENST00000638843 DDX54Q8TDD1 881 aaKnown RBP13.01□□□□□ -0.33
SCARB2-214ENST00000638843 CAMKK2Q96RR4 588 aa13.01□□□□□ -0.33
SCARB2-214ENST00000638843 BCL9O00512 1426 aa13.01□□□□□ -0.33
SCARB2-214ENST00000638843 EIF4A2Q14240 407 aaKnown RBP13□□□□□ -0.33
SCARB2-214ENST00000638843 BCL11BQ9C0K0 894 aaPredicted RBP13□□□□□ -0.33
SCARB2-214ENST00000638843 MEGF6O75095 1541 aa12.99□□□□□ -0.33
SCARB2-214ENST00000638843 KCNQ2O43526 872 aa12.99□□□□□ -0.33
SCARB2-214ENST00000638843 EYA1Q99502 592 aa12.99□□□□□ -0.33
SCARB2-214ENST00000638843 CNGB1Q14028 1251 aaPredicted RBP12.98□□□□□ -0.33
SCARB2-214ENST00000638843 ZCRB1Q8TBF4 217 aaKnown RBP12.98□□□□□ -0.33
SCARB2-214ENST00000638843 RAPGEF4Q8WZA2 1011 aa12.98□□□□□ -0.33
SCARB2-214ENST00000638843 ACSBG1Q96GR2 724 aa12.98□□□□□ -0.33
SCARB2-214ENST00000638843 TATP17735 454 aaPredicted RBP12.97□□□□□ -0.33
SCARB2-214ENST00000638843 EVX2Q03828 476 aa12.96□□□□□ -0.33
SCARB2-214ENST00000638843 NPC1L1Q9UHC9 1359 aa12.96□□□□□ -0.34
SCARB2-214ENST00000638843 FAM208AQ9UK61 1670 aaKnown RBP12.95□□□□□ -0.34
SCARB2-214ENST00000638843 PLSCR1O15162 318 aa12.95□□□□□ -0.34
SCARB2-214ENST00000638843 MTHFSP49914 203 aa12.95□□□□□ -0.34
SCARB2-214ENST00000638843 NCAPD2Q15021 1401 aa12.95□□□□□ -0.34
SCARB2-214ENST00000638843 PROM2Q8N271 834 aa12.94□□□□□ -0.34
SCARB2-214ENST00000638843 PARD3Q8TEW0 1356 aa12.94□□□□□ -0.34
SCARB2-214ENST00000638843 CYP27B1O15528 508 aa12.94□□□□□ -0.34
SCARB2-214ENST00000638843 WNK3Q9BYP7 1800 aa12.93□□□□□ -0.34
SCARB2-214ENST00000638843 IGSF1Q8N6C5 1336 aa12.93□□□□□ -0.34
SCARB2-214ENST00000638843 RGPD1P0DJD0 1748 aa12.93□□□□□ -0.34
SCARB2-214ENST00000638843 TNS1Q9HBL0 1735 aaKnown RBP12.93□□□□□ -0.34
SCARB2-214ENST00000638843 PSDA5PKW4 1024 aaPredicted RBP12.93□□□□□ -0.34
SCARB2-214ENST00000638843 IL13P35225 146 aa12.93□□□□□ -0.34
SCARB2-214ENST00000638843 PRIM1P49642 420 aaKnown RBP12.93□□□□□ -0.34
SCARB2-214ENST00000638843 AEBP1Q8IUX7 1158 aa12.92□□□□□ -0.34
SCARB2-214ENST00000638843 ANKRD26Q9UPS8 1709 aa12.92□□□□□ -0.34
SCARB2-214ENST00000638843 PCDH11XQ9BZA7 1347 aa12.92□□□□□ -0.34
SCARB2-214ENST00000638843 PCDH11YQ9BZA8 1340 aa12.92□□□□□ -0.34
SCARB2-214ENST00000638843 R3HDM1Q15032 1099 aaKnown RBP12.91□□□□□ -0.34
SCARB2-214ENST00000638843 SYTL4Q96C24 671 aaPredicted RBP12.91□□□□□ -0.34
SCARB2-214ENST00000638843 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.9□□□□□ -0.34
SCARB2-214ENST00000638843 RGPD2P0DJD1 1756 aa12.9□□□□□ -0.34
SCARB2-214ENST00000638843 TXNRD1Q16881 649 aa12.9□□□□□ -0.35
SCARB2-214ENST00000638843 SULT6B1Q6IMI4 303 aa12.9□□□□□ -0.35
SCARB2-214ENST00000638843 SPG7Q9UQ90 795 aa12.9□□□□□ -0.35
SCARB2-214ENST00000638843 MAP2P11137 1827 aaKnown RBP12.89□□□□□ -0.35
SCARB2-214ENST00000638843 ZEB1P37275 1124 aaPredicted RBP12.88□□□□□ -0.35
SCARB2-214ENST00000638843 NKX1-1Q15270 411 aaPredicted RBP12.88□□□□□ -0.35
SCARB2-214ENST00000638843 ZBTB22O15209 634 aa12.87□□□□□ -0.35
SCARB2-214ENST00000638843 DIAPH1O60610 1272 aaKnown RBP12.87□□□□□ -0.35
SCARB2-214ENST00000638843 NBPF14Q5TI25 921 aa12.87□□□□□ -0.35
SCARB2-214ENST00000638843 ANO8Q9HCE9 1232 aaPredicted RBP12.87□□□□□ -0.35
SCARB2-214ENST00000638843 KDRP35968 1356 aa12.87□□□□□ -0.35
SCARB2-214ENST00000638843 PHKG2P15735 406 aa12.86□□□□□ -0.35
SCARB2-214ENST00000638843 PPP2R1AP30153 589 aa12.86□□□□□ -0.35
SCARB2-214ENST00000638843 DDX10Q13206 875 aaKnown RBP12.86□□□□□ -0.35
SCARB2-214ENST00000638843 IFNL2Q8IZJ0 200 aa12.86□□□□□ -0.35
SCARB2-214ENST00000638843 HMOX1P09601 288 aa12.86□□□□□ -0.35
SCARB2-214ENST00000638843 PLEKHO1Q53GL0 409 aaPredicted RBP12.86□□□□□ -0.35
SCARB2-214ENST00000638843 MPRIPQ6WCQ1 1025 aa12.86□□□□□ -0.35
SCARB2-214ENST00000638843 LRRC4BQ9NT99 713 aa12.86□□□□□ -0.35
SCARB2-214ENST00000638843 SBF2Q86WG5 1849 aa12.85□□□□□ -0.35
SCARB2-214ENST00000638843 KCNQ4P56696 695 aa12.85□□□□□ -0.35
SCARB2-214ENST00000638843 SPDYE2BA6NHP3 402 aa12.84□□□□□ -0.35
SCARB2-214ENST00000638843 SPDYE6P0CI01 402 aa12.84□□□□□ -0.35
SCARB2-214ENST00000638843 SPDYE2Q495Y8 402 aa12.84□□□□□ -0.35
SCARB2-214ENST00000638843 AMOTQ4VCS5 1084 aa12.84□□□□□ -0.35
SCARB2-214ENST00000638843 PIGBQ92521 554 aa12.84□□□□□ -0.35
SCARB2-214ENST00000638843 PLEKHG2Q9H7P9 1386 aa12.84□□□□□ -0.35
SCARB2-214ENST00000638843 NHSQ6T4R5 1651 aa12.84□□□□□ -0.35
SCARB2-214ENST00000638843 SHANK3Q9BYB0 1731 aa12.83□□□□□ -0.35
SCARB2-214ENST00000638843 ZNF530Q6P9A1 599 aaPredicted RBP12.83□□□□□ -0.36
SCARB2-214ENST00000638843 COL3A1P02461 1466 aaPredicted RBP12.83□□□□□ -0.36
SCARB2-214ENST00000638843 U2SURPO15042 1029 aaKnown RBP12.82□□□□□ -0.36
SCARB2-214ENST00000638843 PDGFDQ9GZP0 370 aaPredicted RBP12.82□□□□□ -0.36
SCARB2-214ENST00000638843 SLC15A2Q16348 729 aa12.81□□□□□ -0.36
SCARB2-214ENST00000638843 SLC27A3Q5K4L6 730 aa12.81□□□□□ -0.36
SCARB2-214ENST00000638843 RREB1Q92766 1687 aa12.81□□□□□ -0.36
SCARB2-214ENST00000638843 DCAF5Q96JK2 942 aa12.81□□□□□ -0.36
SCARB2-214ENST00000638843 CFAP53Q96M91 514 aa12.81□□□□□ -0.36
SCARB2-214ENST00000638843 STK32BQ9NY57 414 aa12.81□□□□□ -0.36
SCARB2-214ENST00000638843 HSP90AB1P08238 724 aaKnown RBP12.8□□□□□ -0.36
SCARB2-214ENST00000638843 ZNF827Q17R98 1081 aa12.8□□□□□ -0.36
SCARB2-214ENST00000638843 NUP188Q5SRE5 1749 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms