RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 MTHFSP49914 203 aa17.01■□□□□ 0.31
CLN6-225ENST00000638144 NCAPD2Q15021 1401 aa17.01■□□□□ 0.31
CLN6-225ENST00000638144 NHSQ6T4R5 1651 aa17.01■□□□□ 0.31
CLN6-225ENST00000638144 KCNQ2O43526 872 aa17■□□□□ 0.31
CLN6-225ENST00000638144 TATP17735 454 aaPredicted RBP17■□□□□ 0.31
CLN6-225ENST00000638144 PKD1L3Q7Z443 1732 aa17■□□□□ 0.31
CLN6-225ENST00000638144 ZCRB1Q8TBF4 217 aaKnown RBP17■□□□□ 0.31
CLN6-225ENST00000638144 EZH2Q15910 746 aaKnown RBP16.99■□□□□ 0.31
CLN6-225ENST00000638144 DDX10Q13206 875 aaKnown RBP16.98■□□□□ 0.31
CLN6-225ENST00000638144 AEBP1Q8IUX7 1158 aa16.98■□□□□ 0.31
CLN6-225ENST00000638144 BTAF1O14981 1849 aa16.98■□□□□ 0.31
CLN6-225ENST00000638144 RREB1Q92766 1687 aa16.97■□□□□ 0.31
CLN6-225ENST00000638144 IGSF1Q8N6C5 1336 aa16.97■□□□□ 0.31
CLN6-225ENST00000638144 BCL9O00512 1426 aa16.97■□□□□ 0.31
CLN6-225ENST00000638144 NUP188Q5SRE5 1749 aa16.96■□□□□ 0.31
CLN6-225ENST00000638144 COL3A1P02461 1466 aaPredicted RBP16.96■□□□□ 0.31
CLN6-225ENST00000638144 IL13P35225 146 aa16.95■□□□□ 0.3
CLN6-225ENST00000638144 CAMKK2Q96RR4 588 aa16.95■□□□□ 0.3
CLN6-225ENST00000638144 BCL11BQ9C0K0 894 aaPredicted RBP16.95■□□□□ 0.3
CLN6-225ENST00000638144 TOGARAM1Q9Y4F4 1720 aa16.95■□□□□ 0.3
CLN6-225ENST00000638144 PCDH11XQ9BZA7 1347 aa16.94■□□□□ 0.3
CLN6-225ENST00000638144 PCDH11YQ9BZA8 1340 aa16.94■□□□□ 0.3
CLN6-225ENST00000638144 CYP27B1O15528 508 aa16.93■□□□□ 0.3
CLN6-225ENST00000638144 SYTL4Q96C24 671 aaPredicted RBP16.93■□□□□ 0.3
CLN6-225ENST00000638144 RGPD3A6NKT7 1758 aaPredicted RBP16.92■□□□□ 0.3
CLN6-225ENST00000638144 RGPD4Q7Z3J3 1758 aa16.92■□□□□ 0.3
CLN6-225ENST00000638144 PPP2R1AP30153 589 aa16.92■□□□□ 0.3
CLN6-225ENST00000638144 SULT6B1Q6IMI4 303 aa16.92■□□□□ 0.3
CLN6-225ENST00000638144 PSDA5PKW4 1024 aaPredicted RBP16.91■□□□□ 0.3
CLN6-225ENST00000638144 DIAPH1O60610 1272 aaKnown RBP16.91■□□□□ 0.3
CLN6-225ENST00000638144 HMOX1P09601 288 aa16.91■□□□□ 0.3
CLN6-225ENST00000638144 PRIM1P49642 420 aaKnown RBP16.91■□□□□ 0.3
CLN6-225ENST00000638144 SPG7Q9UQ90 795 aa16.9■□□□□ 0.3
CLN6-225ENST00000638144 ITGB4P16144 1822 aa16.9■□□□□ 0.3
CLN6-225ENST00000638144 PARD3Q8TEW0 1356 aa16.89■□□□□ 0.3
CLN6-225ENST00000638144 KDRP35968 1356 aa16.89■□□□□ 0.29
CLN6-225ENST00000638144 U2SURPO15042 1029 aaKnown RBP16.88■□□□□ 0.29
CLN6-225ENST00000638144 ZNF530Q6P9A1 599 aaPredicted RBP16.87■□□□□ 0.29
CLN6-225ENST00000638144 SRCAPQ6ZRS2 3230 aa16.87■□□□□ 0.29
CLN6-225ENST00000638144 PHKG2P15735 406 aa16.86■□□□□ 0.29
CLN6-225ENST00000638144 R3HDM1Q15032 1099 aaKnown RBP16.86■□□□□ 0.29
CLN6-225ENST00000638144 PROM2Q8N271 834 aa16.86■□□□□ 0.29
CLN6-225ENST00000638144 PLSCR1O15162 318 aa16.85■□□□□ 0.29
CLN6-225ENST00000638144 TXNRD1Q16881 649 aa16.85■□□□□ 0.29
CLN6-225ENST00000638144 CFAP53Q96M91 514 aa16.85■□□□□ 0.29
CLN6-225ENST00000638144 KCNQ4P56696 695 aa16.84■□□□□ 0.29
CLN6-225ENST00000638144 PLEKHO1Q53GL0 409 aaPredicted RBP16.84■□□□□ 0.29
CLN6-225ENST00000638144 MPRIPQ6WCQ1 1025 aa16.84■□□□□ 0.29
CLN6-225ENST00000638144 IFNL2Q8IZJ0 200 aa16.84■□□□□ 0.29
CLN6-225ENST00000638144 ANO8Q9HCE9 1232 aaPredicted RBP16.84■□□□□ 0.29
CLN6-225ENST00000638144 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.84■□□□□ 0.29
CLN6-225ENST00000638144 KDM6AO15550 1401 aaPredicted RBP16.83■□□□□ 0.28
CLN6-225ENST00000638144 LY75O60449 1722 aa16.83■□□□□ 0.28
CLN6-225ENST00000638144 VIRMAQ69YN4 1812 aaKnown RBP16.82■□□□□ 0.28
CLN6-225ENST00000638144 PAPPAQ13219 1627 aa16.81■□□□□ 0.28
CLN6-225ENST00000638144 ZNF316A6NFI3 1004 aaPredicted RBP16.81■□□□□ 0.28
CLN6-225ENST00000638144 NKX1-1Q15270 411 aaPredicted RBP16.81■□□□□ 0.28
CLN6-225ENST00000638144 PLEKHG2Q9H7P9 1386 aa16.8■□□□□ 0.28
CLN6-225ENST00000638144 AMOTQ4VCS5 1084 aa16.8■□□□□ 0.28
CLN6-225ENST00000638144 LRRC4BQ9NT99 713 aa16.8■□□□□ 0.28
CLN6-225ENST00000638144 SCN11AQ9UI33 1791 aa16.79■□□□□ 0.28
CLN6-225ENST00000638144 U2AF1L5P0DN76 240 aaPredicted RBP16.79■□□□□ 0.28
CLN6-225ENST00000638144 U2AF1Q01081 240 aaKnown RBP eCLIP16.79■□□□□ 0.28
CLN6-225ENST00000638144 C1orf141Q5JVX7 400 aa16.79■□□□□ 0.28
CLN6-225ENST00000638144 PIGBQ92521 554 aa16.79■□□□□ 0.28
CLN6-225ENST00000638144 PRKAR2BP31323 418 aa16.78■□□□□ 0.28
CLN6-225ENST00000638144 RALBP1Q15311 655 aa16.78■□□□□ 0.28
CLN6-225ENST00000638144 MTHFSDQ2M296 383 aaKnown RBP16.78■□□□□ 0.28
CLN6-225ENST00000638144 NBPF14Q5TI25 921 aa16.78■□□□□ 0.28
CLN6-225ENST00000638144 TMOD3Q9NYL9 352 aa16.78■□□□□ 0.28
CLN6-225ENST00000638144 PALLDQ8WX93 1383 aa16.77■□□□□ 0.28
CLN6-225ENST00000638144 RSPH6AQ9H0K4 717 aa16.77■□□□□ 0.28
CLN6-225ENST00000638144 NUDCQ9Y266 331 aa16.77■□□□□ 0.28
CLN6-225ENST00000638144 TUBGCP6Q96RT7 1819 aa16.77■□□□□ 0.27
CLN6-225ENST00000638144 ZNF827Q17R98 1081 aa16.76■□□□□ 0.27
CLN6-225ENST00000638144 DCAF5Q96JK2 942 aa16.76■□□□□ 0.27
CLN6-225ENST00000638144 PDGFDQ9GZP0 370 aaPredicted RBP16.76■□□□□ 0.27
CLN6-225ENST00000638144 CCNL1Q9UK58 526 aaPredicted RBP16.76■□□□□ 0.27
CLN6-225ENST00000638144 C5P01031 1676 aa16.75■□□□□ 0.27
CLN6-225ENST00000638144 MYBBP1AQ9BQG0 1328 aaKnown RBP16.75■□□□□ 0.27
CLN6-225ENST00000638144 HSP90AB1P08238 724 aaKnown RBP16.75■□□□□ 0.27
CLN6-225ENST00000638144 PHACTR3Q96KR7 559 aa16.75■□□□□ 0.27
CLN6-225ENST00000638144 ASAP1Q9ULH1 1129 aa16.75■□□□□ 0.27
CLN6-225ENST00000638144 TAF1LQ8IZX4 1826 aa16.75■□□□□ 0.27
CLN6-225ENST00000638144 CASZ1Q86V15 1759 aa16.74■□□□□ 0.27
CLN6-225ENST00000638144 AKAP4Q5JQC9 854 aa16.74■□□□□ 0.27
CLN6-225ENST00000638144 LGR6Q9HBX8 967 aa16.74■□□□□ 0.27
CLN6-225ENST00000638144 STK32BQ9NY57 414 aa16.74■□□□□ 0.27
CLN6-225ENST00000638144 CABP4P57796 275 aa16.73■□□□□ 0.27
CLN6-225ENST00000638144 PRKRIP1Q9H875 184 aaPredicted RBP16.73■□□□□ 0.27
CLN6-225ENST00000638144 ADAMTS7Q9UKP4 1686 aa16.72■□□□□ 0.27
CLN6-225ENST00000638144 ERVV-2B6SEH9 535 aa16.72■□□□□ 0.27
CLN6-225ENST00000638144 SLC15A2Q16348 729 aa16.72■□□□□ 0.27
CLN6-225ENST00000638144 SLC27A3Q5K4L6 730 aa16.72■□□□□ 0.27
CLN6-225ENST00000638144 ATG3Q9NT62 314 aa16.72■□□□□ 0.27
CLN6-225ENST00000638144 RNMTO43148 476 aaKnown RBP16.71■□□□□ 0.27
CLN6-225ENST00000638144 NFATC2IPQ8NCF5 419 aa16.71■□□□□ 0.27
CLN6-225ENST00000638144 MAP3K5Q99683 1374 aa16.71■□□□□ 0.27
CLN6-225ENST00000638144 MRC1P22897 1456 aa16.7■□□□□ 0.26
CLN6-225ENST00000638144 SMARCC1Q92922 1105 aaPredicted RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms