RNA–Protein interactions for RNA: ENST00000638129.1

CACNA1D-229, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 5

Gene CACNA1D, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-229ENST00000638129 STK32BQ9NY57 414 aa13.04□□□□□ -0.32
CACNA1D-229ENST00000638129 TONSLQ96HA7 1378 aa13.04□□□□□ -0.32
CACNA1D-229ENST00000638129 SGIP1Q9BQI5 828 aa13.03□□□□□ -0.32
CACNA1D-229ENST00000638129 TERF2IPQ9NYB0 399 aa13.03□□□□□ -0.32
CACNA1D-229ENST00000638129 FAM208AQ9UK61 1670 aaKnown RBP13.02□□□□□ -0.32
CACNA1D-229ENST00000638129 IP6K1Q92551 441 aa13.02□□□□□ -0.33
CACNA1D-229ENST00000638129 ST20-MTHFSA0A0A6YYL1 179 aa13.01□□□□□ -0.33
CACNA1D-229ENST00000638129 LRRC4BQ9NT99 713 aa13.01□□□□□ -0.33
CACNA1D-229ENST00000638129 SHANK3Q9BYB0 1731 aa13.01□□□□□ -0.33
CACNA1D-229ENST00000638129 RGPD2P0DJD1 1756 aa13.01□□□□□ -0.33
CACNA1D-229ENST00000638129 MAP3K19Q56UN5 1328 aa13□□□□□ -0.33
CACNA1D-229ENST00000638129 ZNF827Q17R98 1081 aa13□□□□□ -0.33
CACNA1D-229ENST00000638129 MTFR1LQ9H019 292 aa13□□□□□ -0.33
CACNA1D-229ENST00000638129 FBLN1P23142 703 aa12.99□□□□□ -0.33
CACNA1D-229ENST00000638129 SPDYE2BA6NHP3 402 aa12.98□□□□□ -0.33
CACNA1D-229ENST00000638129 SPDYE6P0CI01 402 aa12.98□□□□□ -0.33
CACNA1D-229ENST00000638129 HOXC9P31274 260 aa12.98□□□□□ -0.33
CACNA1D-229ENST00000638129 SPDYE2Q495Y8 402 aa12.98□□□□□ -0.33
CACNA1D-229ENST00000638129 LTV1Q96GA3 475 aaPredicted RBP12.98□□□□□ -0.33
CACNA1D-229ENST00000638129 FHDC1Q9C0D6 1143 aaPredicted RBP12.98□□□□□ -0.33
CACNA1D-229ENST00000638129 QSER1Q2KHR3 1735 aa12.98□□□□□ -0.33
CACNA1D-229ENST00000638129 DOT1LQ8TEK3 1739 aa12.98□□□□□ -0.33
CACNA1D-229ENST00000638129 UTRNP46939 3433 aa12.98□□□□□ -0.33
CACNA1D-229ENST00000638129 MEGF6O75095 1541 aa12.98□□□□□ -0.33
CACNA1D-229ENST00000638129 TUBGCP6Q96RT7 1819 aa12.97□□□□□ -0.33
CACNA1D-229ENST00000638129 NSD2O96028 1365 aa12.97□□□□□ -0.33
CACNA1D-229ENST00000638129 ANKRD36BQ8N2N9 1353 aa12.97□□□□□ -0.33
CACNA1D-229ENST00000638129 COL24A1Q17RW2 1714 aa12.97□□□□□ -0.33
CACNA1D-229ENST00000638129 SYT17Q9BSW7 474 aa12.97□□□□□ -0.33
CACNA1D-229ENST00000638129 MKRN4PQ13434 485 aaPredicted RBP12.96□□□□□ -0.33
CACNA1D-229ENST00000638129 DDX54Q8TDD1 881 aaKnown RBP12.96□□□□□ -0.33
CACNA1D-229ENST00000638129 COG3Q96JB2 828 aa12.96□□□□□ -0.33
CACNA1D-229ENST00000638129 LY75O60449 1722 aa12.96□□□□□ -0.34
CACNA1D-229ENST00000638129 RTL1A6NKG5 1358 aa12.95□□□□□ -0.34
CACNA1D-229ENST00000638129 MAP3K5Q99683 1374 aa12.95□□□□□ -0.34
CACNA1D-229ENST00000638129 AMPHP49418 695 aa12.94□□□□□ -0.34
CACNA1D-229ENST00000638129 SLC27A3Q5K4L6 730 aa12.94□□□□□ -0.34
CACNA1D-229ENST00000638129 ARXQ96QS3 562 aa12.94□□□□□ -0.34
CACNA1D-229ENST00000638129 PNPLA7Q6ZV29 1317 aa12.93□□□□□ -0.34
CACNA1D-229ENST00000638129 PITPNM1O00562 1244 aa12.93□□□□□ -0.34
CACNA1D-229ENST00000638129 FYB1O15117 783 aa12.93□□□□□ -0.34
CACNA1D-229ENST00000638129 PRIM1P49642 420 aaKnown RBP12.93□□□□□ -0.34
CACNA1D-229ENST00000638129 KCNQ4P56696 695 aa12.93□□□□□ -0.34
CACNA1D-229ENST00000638129 RRS1Q15050 365 aaKnown RBP12.93□□□□□ -0.34
CACNA1D-229ENST00000638129 NBPF6Q5VWK0 638 aa12.93□□□□□ -0.34
CACNA1D-229ENST00000638129 NBPF4Q96M43 638 aa12.93□□□□□ -0.34
CACNA1D-229ENST00000638129 CHD4Q14839 1912 aa12.93□□□□□ -0.34
CACNA1D-229ENST00000638129 USP47Q96K76 1375 aa12.93□□□□□ -0.34
CACNA1D-229ENST00000638129 SLC24A1O60721 1099 aa12.92□□□□□ -0.34
CACNA1D-229ENST00000638129 ZCRB1Q8TBF4 217 aaKnown RBP12.92□□□□□ -0.34
CACNA1D-229ENST00000638129 GGNBP2Q9H3C7 697 aa12.92□□□□□ -0.34
CACNA1D-229ENST00000638129 KIF20BQ96Q89 1820 aa12.91□□□□□ -0.34
CACNA1D-229ENST00000638129 PIP4P2Q8N4L2 257 aa12.9□□□□□ -0.34
CACNA1D-229ENST00000638129 USHBP1Q8N6Y0 703 aa12.9□□□□□ -0.34
CACNA1D-229ENST00000638129 ZNF784Q8NCA9 323 aaPredicted RBP12.9□□□□□ -0.34
CACNA1D-229ENST00000638129 SLC16A10Q8TF71 515 aa12.9□□□□□ -0.34
CACNA1D-229ENST00000638129 SYTL4Q96C24 671 aaPredicted RBP12.9□□□□□ -0.34
CACNA1D-229ENST00000638129 TMF1P82094 1093 aa12.89□□□□□ -0.35
CACNA1D-229ENST00000638129 HSP90AB2PQ58FF8 381 aa12.88□□□□□ -0.35
CACNA1D-229ENST00000638129 INSRP06213 1382 aa12.88□□□□□ -0.35
CACNA1D-229ENST00000638129 TOGARAM1Q9Y4F4 1720 aa12.88□□□□□ -0.35
CACNA1D-229ENST00000638129 CGNL1Q0VF96 1302 aa12.88□□□□□ -0.35
CACNA1D-229ENST00000638129 FLT4P35916 1363 aa12.87□□□□□ -0.35
CACNA1D-229ENST00000638129 CARD14Q9BXL6 1004 aa12.87□□□□□ -0.35
CACNA1D-229ENST00000638129 TFCP2L1Q9NZI6 479 aa12.87□□□□□ -0.35
CACNA1D-229ENST00000638129 CCNL1Q9UK58 526 aaPredicted RBP12.87□□□□□ -0.35
CACNA1D-229ENST00000638129 NCAPD2Q15021 1401 aa12.87□□□□□ -0.35
CACNA1D-229ENST00000638129 KIF24Q5T7B8 1368 aa12.86□□□□□ -0.35
CACNA1D-229ENST00000638129 PKD1L3Q7Z443 1732 aa12.86□□□□□ -0.35
CACNA1D-229ENST00000638129 ANKRD26Q9UPS8 1709 aa12.86□□□□□ -0.35
CACNA1D-229ENST00000638129 SMG6Q86US8 1419 aaKnown RBP12.86□□□□□ -0.35
CACNA1D-229ENST00000638129 C5P01031 1676 aa12.86□□□□□ -0.35
CACNA1D-229ENST00000638129 TAF1LQ8IZX4 1826 aa12.85□□□□□ -0.35
CACNA1D-229ENST00000638129 GOLGB1Q14789 3259 aaKnown RBP12.85□□□□□ -0.35
CACNA1D-229ENST00000638129 COL23A1Q86Y22 540 aaPredicted RBP12.85□□□□□ -0.35
CACNA1D-229ENST00000638129 NLGN2Q8NFZ4 835 aa12.85□□□□□ -0.35
CACNA1D-229ENST00000638129 RAPGEF4Q8WZA2 1011 aa12.85□□□□□ -0.35
CACNA1D-229ENST00000638129 NSD3Q9BZ95 1437 aa12.85□□□□□ -0.35
CACNA1D-229ENST00000638129 ITGB4P16144 1822 aa12.84□□□□□ -0.35
CACNA1D-229ENST00000638129 CYP27B1O15528 508 aa12.84□□□□□ -0.35
CACNA1D-229ENST00000638129 TATP17735 454 aaPredicted RBP12.84□□□□□ -0.35
CACNA1D-229ENST00000638129 POLD1P28340 1107 aa12.84□□□□□ -0.35
CACNA1D-229ENST00000638129 FXR2P51116 673 aaKnown RBP eCLIP12.84□□□□□ -0.35
CACNA1D-229ENST00000638129 EMILIN1Q9Y6C2 1016 aa12.84□□□□□ -0.35
CACNA1D-229ENST00000638129 PCDH11XQ9BZA7 1347 aa12.84□□□□□ -0.35
CACNA1D-229ENST00000638129 PCDH11YQ9BZA8 1340 aa12.84□□□□□ -0.35
CACNA1D-229ENST00000638129 CDCA8Q53HL2 280 aa12.83□□□□□ -0.36
CACNA1D-229ENST00000638129 PALLDQ8WX93 1383 aa12.82□□□□□ -0.36
CACNA1D-229ENST00000638129 TRIM26Q12899 539 aaPredicted RBP12.82□□□□□ -0.36
CACNA1D-229ENST00000638129 GPR162Q16538 588 aa12.82□□□□□ -0.36
CACNA1D-229ENST00000638129 KLHL34Q8N239 644 aa12.82□□□□□ -0.36
CACNA1D-229ENST00000638129 MAP2P11137 1827 aaKnown RBP12.81□□□□□ -0.36
CACNA1D-229ENST00000638129 AMIGO3Q86WK7 504 aa12.81□□□□□ -0.36
CACNA1D-229ENST00000638129 SSUH2Q9Y2M2 353 aa12.81□□□□□ -0.36
CACNA1D-229ENST00000638129 C4BP0C0L5 1744 aa12.8□□□□□ -0.36
CACNA1D-229ENST00000638129 MSL1Q68DK7 614 aa12.8□□□□□ -0.36
CACNA1D-229ENST00000638129 UBR3Q6ZT12 1888 aa12.8□□□□□ -0.36
CACNA1D-229ENST00000638129 YBX3P16989 372 aaKnown RBP eCLIP12.79□□□□□ -0.36
CACNA1D-229ENST00000638129 NKX1-1Q15270 411 aaPredicted RBP12.79□□□□□ -0.36
CACNA1D-229ENST00000638129 MPRIPQ6WCQ1 1025 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms