RNA–Protein interactions for RNA: ENST00000637971.1

CHRNA7-232, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 1,335 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-232ENST00000637971 NBPF6Q5VWK0 638 aa27.72■■■□□ 2.03
CHRNA7-232ENST00000637971 NBPF4Q96M43 638 aa27.72■■■□□ 2.03
CHRNA7-232ENST00000637971 LY75O60449 1722 aa27.72■■■□□ 2.03
CHRNA7-232ENST00000637971 HSP90AB2PQ58FF8 381 aa27.7■■■□□ 2.03
CHRNA7-232ENST00000637971 SYTL4Q96C24 671 aaPredicted RBP27.7■■■□□ 2.03
CHRNA7-232ENST00000637971 FLT4P35916 1363 aa27.7■■■□□ 2.02
CHRNA7-232ENST00000637971 ZCRB1Q8TBF4 217 aaKnown RBP27.69■■■□□ 2.02
CHRNA7-232ENST00000637971 POLR3GLQ9BT43 218 aa27.69■■■□□ 2.02
CHRNA7-232ENST00000637971 ATF5Q9Y2D1 282 aaPredicted RBP27.69■■■□□ 2.02
CHRNA7-232ENST00000637971 INSRP06213 1382 aa27.69■■■□□ 2.02
CHRNA7-232ENST00000637971 LRRC4BQ9NT99 713 aa27.68■■■□□ 2.02
CHRNA7-232ENST00000637971 ZNF827Q17R98 1081 aa27.67■■■□□ 2.02
CHRNA7-232ENST00000637971 NSD2O96028 1365 aa27.67■■■□□ 2.02
CHRNA7-232ENST00000637971 QSER1Q2KHR3 1735 aa27.67■■■□□ 2.02
CHRNA7-232ENST00000637971 PRIM1P49642 420 aaKnown RBP27.67■■■□□ 2.02
CHRNA7-232ENST00000637971 EMILIN1Q9Y6C2 1016 aa27.67■■■□□ 2.02
CHRNA7-232ENST00000637971 PTGER2P43116 358 aa27.66■■■□□ 2.02
CHRNA7-232ENST00000637971 KCNQ4P56696 695 aa27.64■■■□□ 2.01
CHRNA7-232ENST00000637971 RAPGEF4Q8WZA2 1011 aa27.64■■■□□ 2.01
CHRNA7-232ENST00000637971 PKD1L3Q7Z443 1732 aa27.63■■■□□ 2.01
CHRNA7-232ENST00000637971 TOGARAM1Q9Y4F4 1720 aa27.63■■■□□ 2.01
CHRNA7-232ENST00000637971 KIF24Q5T7B8 1368 aa27.63■■■□□ 2.01
CHRNA7-232ENST00000637971 ITGB4P16144 1822 aa27.62■■■□□ 2.01
CHRNA7-232ENST00000637971 PPM1GO15355 546 aaPredicted RBP27.61■■■□□ 2.01
CHRNA7-232ENST00000637971 CCER1Q8TC90 406 aaPredicted RBP27.61■■■□□ 2.01
CHRNA7-232ENST00000637971 TATP17735 454 aaPredicted RBP27.6■■■□□ 2.01
CHRNA7-232ENST00000637971 MTFR1LQ9H019 292 aa27.6■■■□□ 2.01
CHRNA7-232ENST00000637971 CGNL1Q0VF96 1302 aa27.58■■■□□ 2.01
CHRNA7-232ENST00000637971 HSPA5P11021 654 aaKnown RBP27.58■■■□□ 2.01
CHRNA7-232ENST00000637971 SLC27A3Q5K4L6 730 aa27.58■■■□□ 2.01
CHRNA7-232ENST00000637971 AKT1S1Q96B36 256 aa27.57■■■□□ 2
CHRNA7-232ENST00000637971 C5P01031 1676 aa27.56■■■□□ 2
CHRNA7-232ENST00000637971 EIF4G2P78344 907 aaKnown RBP eCLIP27.55■■■□□ 2
CHRNA7-232ENST00000637971 SGIP1Q9BQI5 828 aa27.55■■■□□ 2
CHRNA7-232ENST00000637971 PCDH11XQ9BZA7 1347 aa27.55■■■□□ 2
CHRNA7-232ENST00000637971 PCDH11YQ9BZA8 1340 aa27.55■■■□□ 2
CHRNA7-232ENST00000637971 TAF1LQ8IZX4 1826 aa27.54■■■□□ 2
CHRNA7-232ENST00000637971 NCAPD2Q15021 1401 aa27.53■■■□□ 2
CHRNA7-232ENST00000637971 TNNT2P45379 298 aaPredicted RBP27.53■■■□□ 2
CHRNA7-232ENST00000637971 FHDC1Q9C0D6 1143 aaPredicted RBP27.53■■■□□ 2
CHRNA7-232ENST00000637971 COL24A1Q17RW2 1714 aa27.52■■■□□ 2
CHRNA7-232ENST00000637971 PNPLA7Q6ZV29 1317 aa27.52■■■□□ 2
CHRNA7-232ENST00000637971 CYP27B1O15528 508 aa27.51■■□□□ 1.99
CHRNA7-232ENST00000637971 CCNL1Q9UK58 526 aaPredicted RBP27.51■■□□□ 1.99
CHRNA7-232ENST00000637971 WASHC2AQ641Q2 1341 aa27.5■■□□□ 1.99
CHRNA7-232ENST00000637971 DCAF8L1A6NGE4 600 aa27.49■■□□□ 1.99
CHRNA7-232ENST00000637971 TFCP2L1Q9NZI6 479 aa27.49■■□□□ 1.99
CHRNA7-232ENST00000637971 POLKQ9UBT6 870 aa27.49■■□□□ 1.99
CHRNA7-232ENST00000637971 YY1P25490 414 aa27.48■■□□□ 1.99
CHRNA7-232ENST00000637971 ARXQ96QS3 562 aa27.47■■□□□ 1.99
CHRNA7-232ENST00000637971 SYT17Q9BSW7 474 aa27.47■■□□□ 1.99
CHRNA7-232ENST00000637971 EYA1Q99502 592 aa27.46■■□□□ 1.99
CHRNA7-232ENST00000637971 PANK3Q9H999 370 aa27.46■■□□□ 1.99
CHRNA7-232ENST00000637971 MPRIPQ6WCQ1 1025 aa27.45■■□□□ 1.99
CHRNA7-232ENST00000637971 PALLDQ8WX93 1383 aa27.45■■□□□ 1.98
CHRNA7-232ENST00000637971 EIF4A2Q14240 407 aaKnown RBP27.41■■□□□ 1.98
CHRNA7-232ENST00000637971 CHD4Q14839 1912 aa27.41■■□□□ 1.98
CHRNA7-232ENST00000637971 C4BP0C0L5 1744 aa27.41■■□□□ 1.98
CHRNA7-232ENST00000637971 KLHL34Q8N239 644 aa27.41■■□□□ 1.98
CHRNA7-232ENST00000637971 SLC16A10Q8TF71 515 aa27.41■■□□□ 1.98
CHRNA7-232ENST00000637971 SPG7Q9UQ90 795 aa27.4■■□□□ 1.98
CHRNA7-232ENST00000637971 MSH5O43196 834 aa27.39■■□□□ 1.97
CHRNA7-232ENST00000637971 UTRNP46939 3433 aa27.39■■□□□ 1.97
CHRNA7-232ENST00000637971 UBR3Q6ZT12 1888 aa27.38■■□□□ 1.97
CHRNA7-232ENST00000637971 MAP3K5Q99683 1374 aa27.38■■□□□ 1.97
CHRNA7-232ENST00000637971 POLD1P28340 1107 aa27.37■■□□□ 1.97
CHRNA7-232ENST00000637971 COL23A1Q86Y22 540 aaPredicted RBP27.37■■□□□ 1.97
CHRNA7-232ENST00000637971 PIGBQ92521 554 aa27.36■■□□□ 1.97
CHRNA7-232ENST00000637971 NKX1-1Q15270 411 aaPredicted RBP27.35■■□□□ 1.97
CHRNA7-232ENST00000637971 MSL1Q68DK7 614 aa27.34■■□□□ 1.97
CHRNA7-232ENST00000637971 PHKG2P15735 406 aa27.33■■□□□ 1.97
CHRNA7-232ENST00000637971 IGSF1Q8N6C5 1336 aa27.32■■□□□ 1.96
CHRNA7-232ENST00000637971 MORC1Q86VD1 984 aa27.32■■□□□ 1.96
CHRNA7-232ENST00000637971 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.32■■□□□ 1.96
CHRNA7-232ENST00000637971 SMARCC1Q92922 1105 aaPredicted RBP27.31■■□□□ 1.96
CHRNA7-232ENST00000637971 IFNL2Q8IZJ0 200 aa27.3■■□□□ 1.96
CHRNA7-232ENST00000637971 TMOD3Q9NYL9 352 aa27.3■■□□□ 1.96
CHRNA7-232ENST00000637971 AMIGO3Q86WK7 504 aa27.29■■□□□ 1.96
CHRNA7-232ENST00000637971 SMIM5Q71RC9 77 aa27.28■■□□□ 1.96
CHRNA7-232ENST00000637971 NLGN2Q8NFZ4 835 aa27.28■■□□□ 1.96
CHRNA7-232ENST00000637971 KIF7Q2M1P5 1343 aa27.28■■□□□ 1.96
CHRNA7-232ENST00000637971 ASAP1Q9ULH1 1129 aa27.27■■□□□ 1.96
CHRNA7-232ENST00000637971 KNSTRNQ9Y448 316 aa27.27■■□□□ 1.96
CHRNA7-232ENST00000637971 AEBP1Q8IUX7 1158 aa27.26■■□□□ 1.95
CHRNA7-232ENST00000637971 AK7Q96M32 723 aa27.26■■□□□ 1.95
CHRNA7-232ENST00000637971 LOC102724428A0A0B4J2F2 783 aa27.25■■□□□ 1.95
CHRNA7-232ENST00000637971 PHF14O94880 888 aa27.25■■□□□ 1.95
CHRNA7-232ENST00000637971 SIK1P57059 783 aa27.25■■□□□ 1.95
CHRNA7-232ENST00000637971 PELP1Q8IZL8 1130 aaKnown RBP27.25■■□□□ 1.95
CHRNA7-232ENST00000637971 GOLGB1Q14789 3259 aaKnown RBP27.25■■□□□ 1.95
CHRNA7-232ENST00000637971 GPR162Q16538 588 aa27.24■■□□□ 1.95
CHRNA7-232ENST00000637971 LINC00116Q8NCU8 138 aa27.24■■□□□ 1.95
CHRNA7-232ENST00000637971 VIRMAQ69YN4 1812 aaKnown RBP27.23■■□□□ 1.95
CHRNA7-232ENST00000637971 KDM6AO15550 1401 aaPredicted RBP27.22■■□□□ 1.95
CHRNA7-232ENST00000637971 PLEKHG2Q9H7P9 1386 aa27.22■■□□□ 1.95
CHRNA7-232ENST00000637971 ITPK1Q13572 414 aa27.22■■□□□ 1.95
CHRNA7-232ENST00000637971 COL5A3P25940 1745 aaPredicted RBP27.22■■□□□ 1.95
CHRNA7-232ENST00000637971 ATG3Q9NT62 314 aa27.21■■□□□ 1.95
CHRNA7-232ENST00000637971 AMER1Q5JTC6 1135 aaPredicted RBP27.2■■□□□ 1.95
CHRNA7-232ENST00000637971 ZNF530Q6P9A1 599 aaPredicted RBP27.2■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms