RNA–Protein interactions for RNA: ENST00000637903.1

SPTAN1-238, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 5

Gene SPTAN1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-238	ENST00000637903	RGPD2	P0DJD1	1756 aa		11.59	□□□□□ -0.55
SPTAN1-238	ENST00000637903	ANKRD36B	Q8N2N9	1353 aa		11.59	□□□□□ -0.55
SPTAN1-238	ENST00000637903	AMPH	P49418	695 aa		11.59	□□□□□ -0.55
SPTAN1-238	ENST00000637903	PRIM1	P49642	420 aa	Known RBP	11.59	□□□□□ -0.55
SPTAN1-238	ENST00000637903	ZNF784	Q8NCA9	323 aa	Predicted RBP	11.59	□□□□□ -0.55
SPTAN1-238	ENST00000637903	ZCRB1	Q8TBF4	217 aa	Known RBP	11.59	□□□□□ -0.55
SPTAN1-238	ENST00000637903	LY75	O60449	1722 aa		11.58	□□□□□ -0.56
SPTAN1-238	ENST00000637903	SHANK3	Q9BYB0	1731 aa		11.58	□□□□□ -0.56
SPTAN1-238	ENST00000637903	NSD2	O96028	1365 aa		11.58	□□□□□ -0.56
SPTAN1-238	ENST00000637903	FYB1	O15117	783 aa		11.58	□□□□□ -0.56
SPTAN1-238	ENST00000637903	PNPLA7	Q6ZV29	1317 aa		11.58	□□□□□ -0.56
SPTAN1-238	ENST00000637903	RTL1	A6NKG5	1358 aa		11.57	□□□□□ -0.56
SPTAN1-238	ENST00000637903	TUBGCP6	Q96RT7	1819 aa		11.57	□□□□□ -0.56
SPTAN1-238	ENST00000637903	CGNL1	Q0VF96	1302 aa		11.57	□□□□□ -0.56
SPTAN1-238	ENST00000637903	MEGF6	O75095	1541 aa		11.56	□□□□□ -0.56
SPTAN1-238	ENST00000637903	NBPF6	Q5VWK0	638 aa		11.56	□□□□□ -0.56
SPTAN1-238	ENST00000637903	DOT1L	Q8TEK3	1739 aa		11.56	□□□□□ -0.56
SPTAN1-238	ENST00000637903	NBPF4	Q96M43	638 aa		11.56	□□□□□ -0.56
SPTAN1-238	ENST00000637903	TFCP2L1	Q9NZI6	479 aa		11.56	□□□□□ -0.56
SPTAN1-238	ENST00000637903	POLD1	P28340	1107 aa		11.55	□□□□□ -0.56
SPTAN1-238	ENST00000637903	KCNQ4	P56696	695 aa		11.55	□□□□□ -0.56
SPTAN1-238	ENST00000637903	TMF1	P82094	1093 aa		11.55	□□□□□ -0.56
SPTAN1-238	ENST00000637903	RRS1	Q15050	365 aa	Known RBP	11.55	□□□□□ -0.56
SPTAN1-238	ENST00000637903	SYTL4	Q96C24	671 aa	Predicted RBP	11.55	□□□□□ -0.56
SPTAN1-238	ENST00000637903	GOLGB1	Q14789	3259 aa	Known RBP	11.55	□□□□□ -0.56
SPTAN1-238	ENST00000637903	GGNBP2	Q9H3C7	697 aa		11.54	□□□□□ -0.56
SPTAN1-238	ENST00000637903	INSR	P06213	1382 aa		11.54	□□□□□ -0.56
SPTAN1-238	ENST00000637903	CCNL1	Q9UK58	526 aa	Predicted RBP	11.53	□□□□□ -0.56
SPTAN1-238	ENST00000637903	KIF24	Q5T7B8	1368 aa		11.53	□□□□□ -0.56
SPTAN1-238	ENST00000637903	USP47	Q96K76	1375 aa		11.53	□□□□□ -0.56
SPTAN1-238	ENST00000637903	TAT	P17735	454 aa	Predicted RBP	11.52	□□□□□ -0.57
SPTAN1-238	ENST00000637903	GPR162	Q16538	588 aa		11.52	□□□□□ -0.57
SPTAN1-238	ENST00000637903	HSP90AB2P	Q58FF8	381 aa		11.52	□□□□□ -0.57
SPTAN1-238	ENST00000637903	USHBP1	Q8N6Y0	703 aa		11.52	□□□□□ -0.57
SPTAN1-238	ENST00000637903	RAPGEF4	Q8WZA2	1011 aa		11.52	□□□□□ -0.57
SPTAN1-238	ENST00000637903	SMG6	Q86US8	1419 aa	Known RBP	11.52	□□□□□ -0.57
SPTAN1-238	ENST00000637903	HMGB2	P26583	209 aa	Known RBP	11.51	□□□□□ -0.57
SPTAN1-238	ENST00000637903	CDCA8	Q53HL2	280 aa		11.51	□□□□□ -0.57
SPTAN1-238	ENST00000637903	COL23A1	Q86Y22	540 aa	Predicted RBP	11.51	□□□□□ -0.57
SPTAN1-238	ENST00000637903	NLGN2	Q8NFZ4	835 aa		11.5	□□□□□ -0.57
SPTAN1-238	ENST00000637903	CARD14	Q9BXL6	1004 aa		11.5	□□□□□ -0.57
SPTAN1-238	ENST00000637903	KIF20B	Q96Q89	1820 aa		11.5	□□□□□ -0.57
SPTAN1-238	ENST00000637903	PCDH11X	Q9BZA7	1347 aa		11.5	□□□□□ -0.57
SPTAN1-238	ENST00000637903	PCDH11Y	Q9BZA8	1340 aa		11.5	□□□□□ -0.57
SPTAN1-238	ENST00000637903	FLT4	P35916	1363 aa		11.5	□□□□□ -0.57
SPTAN1-238	ENST00000637903	TAF1L	Q8IZX4	1826 aa		11.49	□□□□□ -0.57
SPTAN1-238	ENST00000637903	CYP27B1	O15528	508 aa		11.49	□□□□□ -0.57
SPTAN1-238	ENST00000637903	C1QTNF8	P60827	252 aa		11.49	□□□□□ -0.57
SPTAN1-238	ENST00000637903	KLHL34	Q8N239	644 aa		11.48	□□□□□ -0.57
SPTAN1-238	ENST00000637903	FLAD1	Q8NFF5	587 aa		11.48	□□□□□ -0.57
SPTAN1-238	ENST00000637903	NCAPD2	Q15021	1401 aa		11.48	□□□□□ -0.57
SPTAN1-238	ENST00000637903	C5	P01031	1676 aa		11.48	□□□□□ -0.57
SPTAN1-238	ENST00000637903	ITGB4	P16144	1822 aa		11.48	□□□□□ -0.57
SPTAN1-238	ENST00000637903	PALLD	Q8WX93	1383 aa		11.47	□□□□□ -0.57
SPTAN1-238	ENST00000637903	GRIN3B	O60391	1043 aa		11.47	□□□□□ -0.57
SPTAN1-238	ENST00000637903	NKX1-1	Q15270	411 aa	Predicted RBP	11.47	□□□□□ -0.57
SPTAN1-238	ENST00000637903	MPRIP	Q6WCQ1	1025 aa		11.47	□□□□□ -0.57
SPTAN1-238	ENST00000637903	PKD1L3	Q7Z443	1732 aa		11.46	□□□□□ -0.57
SPTAN1-238	ENST00000637903	MSH5	O43196	834 aa		11.46	□□□□□ -0.57
SPTAN1-238	ENST00000637903	YBX3	P16989	372 aa	Known RBP eCLIP	11.46	□□□□□ -0.57
SPTAN1-238	ENST00000637903	SMARCC1	Q92922	1105 aa	Predicted RBP	11.46	□□□□□ -0.57
SPTAN1-238	ENST00000637903	CD2AP	Q9Y5K6	639 aa		11.46	□□□□□ -0.57
SPTAN1-238	ENST00000637903	EMILIN1	Q9Y6C2	1016 aa		11.46	□□□□□ -0.57
SPTAN1-238	ENST00000637903	TOGARAM1	Q9Y4F4	1720 aa		11.46	□□□□□ -0.58
SPTAN1-238	ENST00000637903	NSD3	Q9BZ95	1437 aa		11.45	□□□□□ -0.58
SPTAN1-238	ENST00000637903	WASHC2A	Q641Q2	1341 aa		11.45	□□□□□ -0.58
SPTAN1-238	ENST00000637903	MAP2	P11137	1827 aa	Known RBP	11.45	□□□□□ -0.58
SPTAN1-238	ENST00000637903	EIF4G2	P78344	907 aa	Known RBP eCLIP	11.45	□□□□□ -0.58
SPTAN1-238	ENST00000637903	MSL1	Q68DK7	614 aa		11.45	□□□□□ -0.58
SPTAN1-238	ENST00000637903	PELP1	Q8IZL8	1130 aa	Known RBP	11.45	□□□□□ -0.58
SPTAN1-238	ENST00000637903	PIGB	Q92521	554 aa		11.45	□□□□□ -0.58
SPTAN1-238	ENST00000637903	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.45	□□□□□ -0.58	8e-15	■■■□□ 17.4
SPTAN1-238	ENST00000637903	ANKRD26	Q9UPS8	1709 aa		11.45	□□□□□ -0.58
SPTAN1-238	ENST00000637903	C4B	P0C0L5	1744 aa		11.44	□□□□□ -0.58
SPTAN1-238	ENST00000637903	UBR3	Q6ZT12	1888 aa		11.44	□□□□□ -0.58
SPTAN1-238	ENST00000637903	SENP3-EIF4A1	A0A087X0R7	540 aa		11.43	□□□□□ -0.58
SPTAN1-238	ENST00000637903	GIGYF1	O75420	1035 aa	Predicted RBP	11.43	□□□□□ -0.58
SPTAN1-238	ENST00000637903	HSPA5	P11021	654 aa	Known RBP	11.43	□□□□□ -0.58
SPTAN1-238	ENST00000637903	AMIGO3	Q86WK7	504 aa		11.43	□□□□□ -0.58
SPTAN1-238	ENST00000637903	EYA1	Q99502	592 aa		11.43	□□□□□ -0.58
SPTAN1-238	ENST00000637903	SPG7	Q9UQ90	795 aa		11.43	□□□□□ -0.58
SPTAN1-238	ENST00000637903	AK7	Q96M32	723 aa		11.42	□□□□□ -0.58
SPTAN1-238	ENST00000637903	POLK	Q9UBT6	870 aa		11.42	□□□□□ -0.58
SPTAN1-238	ENST00000637903	LOC102724428	A0A0B4J2F2	783 aa		11.41	□□□□□ -0.58
SPTAN1-238	ENST00000637903	PPM1G	O15355	546 aa	Predicted RBP	11.41	□□□□□ -0.58
SPTAN1-238	ENST00000637903	SSFA2	P28290	1259 aa		11.41	□□□□□ -0.58
SPTAN1-238	ENST00000637903	SIK1	P57059	783 aa		11.41	□□□□□ -0.58
SPTAN1-238	ENST00000637903	PLEKHG2	Q9H7P9	1386 aa		11.41	□□□□□ -0.58
SPTAN1-238	ENST00000637903	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	11.4	□□□□□ -0.58
SPTAN1-238	ENST00000637903	PHKG2	P15735	406 aa		11.4	□□□□□ -0.58
SPTAN1-238	ENST00000637903	IFNL2	Q8IZJ0	200 aa		11.4	□□□□□ -0.58
SPTAN1-238	ENST00000637903	LINC00116	Q8NCU8	138 aa		11.4	□□□□□ -0.58
SPTAN1-238	ENST00000637903	ASAP1	Q9ULH1	1129 aa		11.4	□□□□□ -0.58
SPTAN1-238	ENST00000637903	ITPK1	Q13572	414 aa		11.39	□□□□□ -0.59
SPTAN1-238	ENST00000637903	SMIM5	Q71RC9	77 aa		11.39	□□□□□ -0.59
SPTAN1-238	ENST00000637903	TMOD3	Q9NYL9	352 aa		11.39	□□□□□ -0.59
SPTAN1-238	ENST00000637903	CEP350	Q5VT06	3117 aa		11.39	□□□□□ -0.59
SPTAN1-238	ENST00000637903	PHF14	O94880	888 aa		11.38	□□□□□ -0.59
SPTAN1-238	ENST00000637903	EIF4A2	Q14240	407 aa	Known RBP	11.38	□□□□□ -0.59
SPTAN1-238	ENST00000637903	ATG3	Q9NT62	314 aa		11.38	□□□□□ -0.59

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