RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 RTF1Q92541 710 aaKnown RBP15.32■□□□□ 0.04
CLN6-223ENST00000637823 CARD10Q9BWT7 1032 aa15.32■□□□□ 0.04
CLN6-223ENST00000637823 RCAN3Q9UKA8 241 aa15.32■□□□□ 0.04
CLN6-223ENST00000637823 GNAI1P63096 354 aa15.31■□□□□ 0.04
CLN6-223ENST00000637823 IFT57Q9NWB7 429 aa15.31■□□□□ 0.04
CLN6-223ENST00000637823 BTG4Q9NY30 223 aa15.31■□□□□ 0.04
CLN6-223ENST00000637823 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.31■□□□□ 0.04
CLN6-223ENST00000637823 PLCH1Q4KWH8 1693 aa15.31■□□□□ 0.04
CLN6-223ENST00000637823 NUTM2BA6NNL0 878 aaPredicted RBP15.3■□□□□ 0.04
CLN6-223ENST00000637823 NUTM2EB1AL46 878 aaPredicted RBP15.3■□□□□ 0.04
CLN6-223ENST00000637823 NUTM2AQ8IVF1 878 aaPredicted RBP15.3■□□□□ 0.04
CLN6-223ENST00000637823 MAP3K5Q99683 1374 aa15.3■□□□□ 0.04
CLN6-223ENST00000637823 STRN4Q9NRL3 753 aa15.3■□□□□ 0.04
CLN6-223ENST00000637823 PARP4Q9UKK3 1724 aaKnown RBP15.29■□□□□ 0.04
CLN6-223ENST00000637823 NWD2Q9ULI1 1742 aa15.29■□□□□ 0.04
CLN6-223ENST00000637823 ADAMTS2O95450 1211 aa15.29■□□□□ 0.04
CLN6-223ENST00000637823 ZNF853P0CG23 659 aa15.29■□□□□ 0.04
CLN6-223ENST00000637823 DCTN1Q14203 1278 aa15.29■□□□□ 0.04
CLN6-223ENST00000637823 AKAP4Q5JQC9 854 aa15.29■□□□□ 0.04
CLN6-223ENST00000637823 ZNF530Q6P9A1 599 aaPredicted RBP15.29■□□□□ 0.04
CLN6-223ENST00000637823 LARP1Q6PKG0 1096 aaKnown RBP15.29■□□□□ 0.04
CLN6-223ENST00000637823 CFAP44Q96MT7 982 aa15.29■□□□□ 0.04
CLN6-223ENST00000637823 THUMPD2Q9BTF0 503 aaKnown RBP15.29■□□□□ 0.04
CLN6-223ENST00000637823 GTF3C3Q9Y5Q9 886 aa15.29■□□□□ 0.04
CLN6-223ENST00000637823 CRB1P82279 1406 aa15.28■□□□□ 0.04
CLN6-223ENST00000637823 SPATA31A6Q5VVP1 1343 aa15.28■□□□□ 0.04
CLN6-223ENST00000637823 MCM10Q7L590 875 aa15.28■□□□□ 0.04
CLN6-223ENST00000637823 SPG7Q9UQ90 795 aa15.28■□□□□ 0.04
CLN6-223ENST00000637823 PKD1L3Q7Z443 1732 aa15.28■□□□□ 0.04
CLN6-223ENST00000637823 RNF123Q5XPI4 1314 aa15.27■□□□□ 0.04
CLN6-223ENST00000637823 FANCIQ9NVI1 1328 aa15.27■□□□□ 0.04
CLN6-223ENST00000637823 NEFLP07196 543 aa15.27■□□□□ 0.04
CLN6-223ENST00000637823 CT47B1P0C2W7 299 aaPredicted RBP15.27■□□□□ 0.04
CLN6-223ENST00000637823 HSPA1LP34931 641 aa15.27■□□□□ 0.04
CLN6-223ENST00000637823 C1orf141Q5JVX7 400 aa15.27■□□□□ 0.04
CLN6-223ENST00000637823 LAS1LQ9Y4W2 734 aaKnown RBP15.27■□□□□ 0.04
CLN6-223ENST00000637823 NRAPQ86VF7 1730 aa15.26■□□□□ 0.03
CLN6-223ENST00000637823 TSR2Q969E8 191 aaKnown RBP15.26■□□□□ 0.03
CLN6-223ENST00000637823 MEGF6O75095 1541 aa15.26■□□□□ 0.03
CLN6-223ENST00000637823 LRRC37A3O60309 1634 aa15.25■□□□□ 0.03
CLN6-223ENST00000637823 CHL1O00533 1208 aa15.25■□□□□ 0.03
CLN6-223ENST00000637823 IL17REQ8NFR9 667 aa15.25■□□□□ 0.03
CLN6-223ENST00000637823 BABAM1Q9NWV8 329 aa15.25■□□□□ 0.03
CLN6-223ENST00000637823 SCN11AQ9UI33 1791 aa15.24■□□□□ 0.03
CLN6-223ENST00000637823 IL2RBP14784 551 aa15.24■□□□□ 0.03
CLN6-223ENST00000637823 EXOSC9Q06265 439 aaKnown RBP15.24■□□□□ 0.03
CLN6-223ENST00000637823 MBIPQ9NS73 344 aa15.24■□□□□ 0.03
CLN6-223ENST00000637823 OVOS2A0A0G2JMS6 1433 aa15.24■□□□□ 0.03
CLN6-223ENST00000637823 CEMIPQ8WUJ3 1361 aa15.24■□□□□ 0.03
CLN6-223ENST00000637823 TAF7Q15545 349 aaPredicted RBP15.23■□□□□ 0.03
CLN6-223ENST00000637823 IFNL2Q8IZJ0 200 aa15.23■□□□□ 0.03
CLN6-223ENST00000637823 ZCRB1Q8TBF4 217 aaKnown RBP15.23■□□□□ 0.03
CLN6-223ENST00000637823 SLIT2O94813 1529 aa15.22■□□□□ 0.03
CLN6-223ENST00000637823 ADAMTS7Q9UKP4 1686 aa15.22■□□□□ 0.03
CLN6-223ENST00000637823 RNMTO43148 476 aaKnown RBP15.22■□□□□ 0.03
CLN6-223ENST00000637823 LGR6Q9HBX8 967 aa15.22■□□□□ 0.03
CLN6-223ENST00000637823 PHKG2P15735 406 aa15.21■□□□□ 0.03
CLN6-223ENST00000637823 RRP1P56182 461 aaKnown RBP15.21■□□□□ 0.03
CLN6-223ENST00000637823 MPRIPQ6WCQ1 1025 aa15.21■□□□□ 0.03
CLN6-223ENST00000637823 ZNF428Q96B54 188 aa15.21■□□□□ 0.03
CLN6-223ENST00000637823 NGLY1Q96IV0 654 aa15.21■□□□□ 0.03
CLN6-223ENST00000637823 WNK3Q9BYP7 1800 aa15.21■□□□□ 0.03
CLN6-223ENST00000637823 SIPA1L3O60292 1781 aaPredicted RBP15.21■□□□□ 0.02
CLN6-223ENST00000637823 HSP90AB1P08238 724 aaKnown RBP15.2■□□□□ 0.02
CLN6-223ENST00000637823 FKBP8Q14318 412 aa15.2■□□□□ 0.02
CLN6-223ENST00000637823 UNC5CLQ8IV45 518 aa15.2■□□□□ 0.02
CLN6-223ENST00000637823 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.2■□□□□ 0.02
CLN6-223ENST00000637823 THRAP3Q9Y2W1 955 aaKnown RBP15.2■□□□□ 0.02
CLN6-223ENST00000637823 RARSP54136 660 aaKnown RBP15.19■□□□□ 0.02
CLN6-223ENST00000637823 TEFQ10587 303 aa15.19■□□□□ 0.02
CLN6-223ENST00000637823 FNBP4Q8N3X1 1017 aaPredicted RBP15.19■□□□□ 0.02
CLN6-223ENST00000637823 CDCA7Q9BWT1 371 aaPredicted RBP15.19■□□□□ 0.02
CLN6-223ENST00000637823 USP35Q9P2H5 1018 aa15.19■□□□□ 0.02
CLN6-223ENST00000637823 TSPYL4Q9UJ04 414 aa15.19■□□□□ 0.02
CLN6-223ENST00000637823 SHANK3Q9BYB0 1731 aa15.19■□□□□ 0.02
CLN6-223ENST00000637823 SPATA31A1Q5TZJ5 1347 aa15.18■□□□□ 0.02
CLN6-223ENST00000637823 PCDH11XQ9BZA7 1347 aa15.18■□□□□ 0.02
CLN6-223ENST00000637823 PCDH11YQ9BZA8 1340 aa15.18■□□□□ 0.02
CLN6-223ENST00000637823 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.18■□□□□ 0.02
CLN6-223ENST00000637823 CYP27B1O15528 508 aa15.18■□□□□ 0.02
CLN6-223ENST00000637823 ERICH6BQ5W0A0 696 aa15.18■□□□□ 0.02
CLN6-223ENST00000637823 DCAF5Q96JK2 942 aa15.18■□□□□ 0.02
CLN6-223ENST00000637823 C8orf37Q96NL8 207 aa15.18■□□□□ 0.02
CLN6-223ENST00000637823 KDM3BQ7LBC6 1761 aa15.18■□□□□ 0.02
CLN6-223ENST00000637823 SPATA31A5Q5VU36 1347 aa15.17■□□□□ 0.02
CLN6-223ENST00000637823 SPATA31A7Q8IWB4 1347 aa15.17■□□□□ 0.02
CLN6-223ENST00000637823 DISP2A7MBM2 1401 aa15.17■□□□□ 0.02
CLN6-223ENST00000637823 LRP6O75581 1613 aa15.17■□□□□ 0.02
CLN6-223ENST00000637823 CACNA1FO60840 1977 aa15.17■□□□□ 0.02
CLN6-223ENST00000637823 VAMP4O75379 141 aa15.17■□□□□ 0.02
CLN6-223ENST00000637823 BCAR3O75815 825 aa15.17■□□□□ 0.02
CLN6-223ENST00000637823 C8orf58Q8NAV2 365 aa15.17■□□□□ 0.02
CLN6-223ENST00000637823 MIS18AQ9NYP9 233 aa15.17■□□□□ 0.02
CLN6-223ENST00000637823 BCL9LQ86UU0 1499 aa15.16■□□□□ 0.02
CLN6-223ENST00000637823 NKX1-1Q15270 411 aaPredicted RBP15.16■□□□□ 0.02
CLN6-223ENST00000637823 VPS72Q15906 364 aa15.16■□□□□ 0.02
CLN6-223ENST00000637823 TWISTNBQ3B726 338 aaPredicted RBP15.16■□□□□ 0.02
CLN6-223ENST00000637823 ALDH1L2Q3SY69 923 aa15.16■□□□□ 0.02
CLN6-223ENST00000637823 MEX3CQ5U5Q3 659 aaKnown RBP15.16■□□□□ 0.02
CLN6-223ENST00000637823 TSPYL6Q8N831 410 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms