RNA–Protein interactions for RNA: ENST00000637777.1

CACNA1A-249, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 728 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-249ENST00000637777 PARD3Q8TEW0 1356 aa19.53■□□□□ 0.72
CACNA1A-249ENST00000637777 NHSQ6T4R5 1651 aa19.52■□□□□ 0.72
CACNA1A-249ENST00000637777 BCL9O00512 1426 aa19.52■□□□□ 0.72
CACNA1A-249ENST00000637777 CAMKK2Q96RR4 588 aa19.52■□□□□ 0.72
CACNA1A-249ENST00000637777 PCDH11XQ9BZA7 1347 aa19.51■□□□□ 0.71
CACNA1A-249ENST00000637777 PCDH11YQ9BZA8 1340 aa19.51■□□□□ 0.71
CACNA1A-249ENST00000637777 SHANK3Q9BYB0 1731 aa19.51■□□□□ 0.71
CACNA1A-249ENST00000637777 KCNQ2O43526 872 aa19.51■□□□□ 0.71
CACNA1A-249ENST00000637777 ZEB1P37275 1124 aaPredicted RBP19.51■□□□□ 0.71
CACNA1A-249ENST00000637777 PTF1AQ7RTS3 328 aa19.51■□□□□ 0.71
CACNA1A-249ENST00000637777 PSDA5PKW4 1024 aaPredicted RBP19.5■□□□□ 0.71
CACNA1A-249ENST00000637777 MTHFSP49914 203 aa19.5■□□□□ 0.71
CACNA1A-249ENST00000637777 DOT1LQ8TEK3 1739 aa19.5■□□□□ 0.71
CACNA1A-249ENST00000637777 SPG7Q9UQ90 795 aa19.49■□□□□ 0.71
CACNA1A-249ENST00000637777 RREB1Q92766 1687 aa19.49■□□□□ 0.71
CACNA1A-249ENST00000637777 NBPF14Q5TI25 921 aa19.48■□□□□ 0.71
CACNA1A-249ENST00000637777 BTAF1O14981 1849 aa19.48■□□□□ 0.71
CACNA1A-249ENST00000637777 NPC1L1Q9UHC9 1359 aa19.47■□□□□ 0.71
CACNA1A-249ENST00000637777 NUP188Q5SRE5 1749 aa19.47■□□□□ 0.71
CACNA1A-249ENST00000637777 RGPD3A6NKT7 1758 aaPredicted RBP19.47■□□□□ 0.71
CACNA1A-249ENST00000637777 RGPD4Q7Z3J3 1758 aa19.47■□□□□ 0.71
CACNA1A-249ENST00000637777 PKD1L3Q7Z443 1732 aa19.46■□□□□ 0.71
CACNA1A-249ENST00000637777 R3HDM1Q15032 1099 aaKnown RBP19.46■□□□□ 0.71
CACNA1A-249ENST00000637777 PLSCR1O15162 318 aa19.45■□□□□ 0.7
CACNA1A-249ENST00000637777 PRIM1P49642 420 aaKnown RBP19.45■□□□□ 0.7
CACNA1A-249ENST00000637777 IGSF1Q8N6C5 1336 aa19.45■□□□□ 0.7
CACNA1A-249ENST00000637777 NCAPD2Q15021 1401 aa19.44■□□□□ 0.7
CACNA1A-249ENST00000637777 DIAPH1O60610 1272 aaKnown RBP19.43■□□□□ 0.7
CACNA1A-249ENST00000637777 SULT6B1Q6IMI4 303 aa19.43■□□□□ 0.7
CACNA1A-249ENST00000637777 CFAP53Q96M91 514 aa19.42■□□□□ 0.7
CACNA1A-249ENST00000637777 CYP27B1O15528 508 aa19.41■□□□□ 0.7
CACNA1A-249ENST00000637777 IL13P35225 146 aa19.41■□□□□ 0.7
CACNA1A-249ENST00000637777 TXNRD1Q16881 649 aa19.41■□□□□ 0.7
CACNA1A-249ENST00000637777 AEBP1Q8IUX7 1158 aa19.41■□□□□ 0.7
CACNA1A-249ENST00000637777 U2SURPO15042 1029 aaKnown RBP19.4■□□□□ 0.7
CACNA1A-249ENST00000637777 PLEKHO1Q53GL0 409 aaPredicted RBP19.4■□□□□ 0.7
CACNA1A-249ENST00000637777 IFNL2Q8IZJ0 200 aa19.4■□□□□ 0.7
CACNA1A-249ENST00000637777 HMOX1P09601 288 aa19.39■□□□□ 0.69
CACNA1A-249ENST00000637777 DDX10Q13206 875 aaKnown RBP19.39■□□□□ 0.69
CACNA1A-249ENST00000637777 MPRIPQ6WCQ1 1025 aa19.39■□□□□ 0.69
CACNA1A-249ENST00000637777 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.39■□□□□ 0.69
CACNA1A-249ENST00000637777 ZNF530Q6P9A1 599 aaPredicted RBP19.38■□□□□ 0.69
CACNA1A-249ENST00000637777 PHKG2P15735 406 aa19.37■□□□□ 0.69
CACNA1A-249ENST00000637777 AMOTQ4VCS5 1084 aa19.37■□□□□ 0.69
CACNA1A-249ENST00000637777 C1orf141Q5JVX7 400 aa19.37■□□□□ 0.69
CACNA1A-249ENST00000637777 STK32BQ9NY57 414 aa19.37■□□□□ 0.69
CACNA1A-249ENST00000637777 ITGB4P16144 1822 aa19.36■□□□□ 0.69
CACNA1A-249ENST00000637777 TOGARAM1Q9Y4F4 1720 aa19.36■□□□□ 0.69
CACNA1A-249ENST00000637777 PPP2R1AP30153 589 aa19.35■□□□□ 0.69
CACNA1A-249ENST00000637777 PROM2Q8N271 834 aa19.35■□□□□ 0.69
CACNA1A-249ENST00000637777 PLEKHG2Q9H7P9 1386 aa19.34■□□□□ 0.69
CACNA1A-249ENST00000637777 HSP90AB1P08238 724 aaKnown RBP19.34■□□□□ 0.69
CACNA1A-249ENST00000637777 ANO8Q9HCE9 1232 aaPredicted RBP19.34■□□□□ 0.69
CACNA1A-249ENST00000637777 TMOD3Q9NYL9 352 aa19.34■□□□□ 0.69
CACNA1A-249ENST00000637777 NUDCQ9Y266 331 aa19.33■□□□□ 0.68
CACNA1A-249ENST00000637777 KDRP35968 1356 aa19.32■□□□□ 0.68
CACNA1A-249ENST00000637777 SLC27A3Q5K4L6 730 aa19.32■□□□□ 0.68
CACNA1A-249ENST00000637777 CCNL1Q9UK58 526 aaPredicted RBP19.32■□□□□ 0.68
CACNA1A-249ENST00000637777 COL3A1P02461 1466 aaPredicted RBP19.32■□□□□ 0.68
CACNA1A-249ENST00000637777 KCNQ4P56696 695 aa19.31■□□□□ 0.68
CACNA1A-249ENST00000637777 NKX1-1Q15270 411 aaPredicted RBP19.31■□□□□ 0.68
CACNA1A-249ENST00000637777 LY75O60449 1722 aa19.31■□□□□ 0.68
CACNA1A-249ENST00000637777 PALLDQ8WX93 1383 aa19.31■□□□□ 0.68
CACNA1A-249ENST00000637777 SMARCC1Q92922 1105 aaPredicted RBP19.3■□□□□ 0.68
CACNA1A-249ENST00000637777 SLC15A2Q16348 729 aa19.29■□□□□ 0.68
CACNA1A-249ENST00000637777 PIGBQ92521 554 aa19.29■□□□□ 0.68
CACNA1A-249ENST00000637777 DCAF5Q96JK2 942 aa19.29■□□□□ 0.68
CACNA1A-249ENST00000637777 LRRC4BQ9NT99 713 aa19.29■□□□□ 0.68
CACNA1A-249ENST00000637777 U2AF1L5P0DN76 240 aaPredicted RBP19.28■□□□□ 0.68
CACNA1A-249ENST00000637777 CABP4P57796 275 aa19.28■□□□□ 0.68
CACNA1A-249ENST00000637777 U2AF1Q01081 240 aaKnown RBP eCLIP19.28■□□□□ 0.68
CACNA1A-249ENST00000637777 SRCAPQ6ZRS2 3230 aa19.26■□□□□ 0.67
CACNA1A-249ENST00000637777 AKAP4Q5JQC9 854 aa19.26■□□□□ 0.67
CACNA1A-249ENST00000637777 LRP5O75197 1615 aa19.25■□□□□ 0.67
CACNA1A-249ENST00000637777 PAPPAQ13219 1627 aa19.25■□□□□ 0.67
CACNA1A-249ENST00000637777 ERVV-2B6SEH9 535 aa19.25■□□□□ 0.67
CACNA1A-249ENST00000637777 TFCP2L1Q9NZI6 479 aa19.25■□□□□ 0.67
CACNA1A-249ENST00000637777 KDM6AO15550 1401 aaPredicted RBP19.25■□□□□ 0.67
CACNA1A-249ENST00000637777 PRKAR2BP31323 418 aa19.24■□□□□ 0.67
CACNA1A-249ENST00000637777 RALBP1Q15311 655 aa19.24■□□□□ 0.67
CACNA1A-249ENST00000637777 ZNF827Q17R98 1081 aa19.24■□□□□ 0.67
CACNA1A-249ENST00000637777 PPP1R1BQ9UD71 204 aaPredicted RBP19.24■□□□□ 0.67
CACNA1A-249ENST00000637777 C5P01031 1676 aa19.24■□□□□ 0.67
CACNA1A-249ENST00000637777 VIRMAQ69YN4 1812 aaKnown RBP19.23■□□□□ 0.67
CACNA1A-249ENST00000637777 MSH5O43196 834 aa19.23■□□□□ 0.67
CACNA1A-249ENST00000637777 ZBTB7AO95365 584 aa19.23■□□□□ 0.67
CACNA1A-249ENST00000637777 NEFMP07197 916 aa19.23■□□□□ 0.67
CACNA1A-249ENST00000637777 HMGB2P26583 209 aaKnown RBP19.23■□□□□ 0.67
CACNA1A-249ENST00000637777 MTHFSDQ2M296 383 aaKnown RBP19.23■□□□□ 0.67
CACNA1A-249ENST00000637777 SPON1Q9HCB6 807 aa19.23■□□□□ 0.67
CACNA1A-249ENST00000637777 ASAP1Q9ULH1 1129 aa19.23■□□□□ 0.67
CACNA1A-249ENST00000637777 SCN11AQ9UI33 1791 aa19.23■□□□□ 0.67
CACNA1A-249ENST00000637777 GAS2L2Q8NHY3 880 aa19.22■□□□□ 0.67
CACNA1A-249ENST00000637777 RBM42Q9BTD8 480 aaKnown RBP19.22■□□□□ 0.67
CACNA1A-249ENST00000637777 PDGFDQ9GZP0 370 aaPredicted RBP19.21■□□□□ 0.67
CACNA1A-249ENST00000637777 CASZ1Q86V15 1759 aa19.21■□□□□ 0.67
CACNA1A-249ENST00000637777 LOC102724428A0A0B4J2F2 783 aa19.2■□□□□ 0.66
CACNA1A-249ENST00000637777 ATP6V1AP38606 617 aa19.2■□□□□ 0.66
CACNA1A-249ENST00000637777 SIK1P57059 783 aa19.2■□□□□ 0.66
CACNA1A-249ENST00000637777 NFATC2IPQ8NCF5 419 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms