RNA–Protein interactions for RNA: ENST00000637649.1

CHRNA7-230, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

Gene CHRNA7, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-230ENST00000637649 COL23A1Q86Y22 540 aaPredicted RBP18.54■□□□□ 0.56
CHRNA7-230ENST00000637649 GPBP1L1Q9HC44 474 aaPredicted RBP18.53■□□□□ 0.56
CHRNA7-230ENST00000637649 USP54Q70EL1 1684 aa18.53■□□□□ 0.56
CHRNA7-230ENST00000637649 ANKRD36BQ8N2N9 1353 aa18.53■□□□□ 0.56
CHRNA7-230ENST00000637649 LY75O60449 1722 aa18.52■□□□□ 0.56
CHRNA7-230ENST00000637649 HDGFL2Q7Z4V5 671 aaPredicted RBP18.52■□□□□ 0.56
CHRNA7-230ENST00000637649 SLC12A5Q9H2X9 1139 aa18.52■□□□□ 0.56
CHRNA7-230ENST00000637649 CD163L1Q9NR16 1453 aa18.52■□□□□ 0.55
CHRNA7-230ENST00000637649 IP6K1Q92551 441 aa18.51■□□□□ 0.55
CHRNA7-230ENST00000637649 SIN3AQ96ST3 1273 aa18.51■□□□□ 0.55
CHRNA7-230ENST00000637649 WWC3Q9ULE0 1092 aa18.51■□□□□ 0.55
CHRNA7-230ENST00000637649 NSD2O96028 1365 aa18.51■□□□□ 0.55
CHRNA7-230ENST00000637649 NEUROD1Q13562 356 aa18.49■□□□□ 0.55
CHRNA7-230ENST00000637649 ZCRB1Q8TBF4 217 aaKnown RBP18.49■□□□□ 0.55
CHRNA7-230ENST00000637649 RGPD2P0DJD1 1756 aa18.49■□□□□ 0.55
CHRNA7-230ENST00000637649 HSPA6P17066 643 aa18.48■□□□□ 0.55
CHRNA7-230ENST00000637649 USP47Q96K76 1375 aa18.47■□□□□ 0.55
CHRNA7-230ENST00000637649 FBLN1P23142 703 aa18.47■□□□□ 0.55
CHRNA7-230ENST00000637649 EDC4Q6P2E9 1401 aaKnown RBP18.47■□□□□ 0.55
CHRNA7-230ENST00000637649 FAM208AQ9UK61 1670 aaKnown RBP18.46■□□□□ 0.55
CHRNA7-230ENST00000637649 MEGF6O75095 1541 aa18.45■□□□□ 0.54
CHRNA7-230ENST00000637649 AMPHP49418 695 aa18.45■□□□□ 0.54
CHRNA7-230ENST00000637649 TERF2IPQ9NYB0 399 aa18.45■□□□□ 0.54
CHRNA7-230ENST00000637649 CD2APQ9Y5K6 639 aa18.45■□□□□ 0.54
CHRNA7-230ENST00000637649 A0A1W2PP64 1363 aa18.44■□□□□ 0.54
CHRNA7-230ENST00000637649 HOXC9P31274 260 aa18.44■□□□□ 0.54
CHRNA7-230ENST00000637649 MAP3K19Q56UN5 1328 aa18.44■□□□□ 0.54
CHRNA7-230ENST00000637649 USHBP1Q8N6Y0 703 aa18.43■□□□□ 0.54
CHRNA7-230ENST00000637649 ADCY9O60503 1353 aa18.42■□□□□ 0.54
CHRNA7-230ENST00000637649 C5P01031 1676 aa18.42■□□□□ 0.54
CHRNA7-230ENST00000637649 SMIM5Q71RC9 77 aa18.41■□□□□ 0.54
CHRNA7-230ENST00000637649 COG3Q96JB2 828 aa18.41■□□□□ 0.54
CHRNA7-230ENST00000637649 CARD11Q9BXL7 1154 aa18.41■□□□□ 0.54
CHRNA7-230ENST00000637649 IGSF1Q8N6C5 1336 aa18.4■□□□□ 0.54
CHRNA7-230ENST00000637649 PHF14O94880 888 aa18.39■□□□□ 0.53
CHRNA7-230ENST00000637649 NBPF6Q5VWK0 638 aa18.39■□□□□ 0.53
CHRNA7-230ENST00000637649 NBPF4Q96M43 638 aa18.39■□□□□ 0.53
CHRNA7-230ENST00000637649 TAF1LQ8IZX4 1826 aa18.39■□□□□ 0.53
CHRNA7-230ENST00000637649 MPRIPQ6WCQ1 1025 aa18.38■□□□□ 0.53
CHRNA7-230ENST00000637649 AMIGO3Q86WK7 504 aa18.38■□□□□ 0.53
CHRNA7-230ENST00000637649 FLAD1Q8NFF5 587 aa18.38■□□□□ 0.53
CHRNA7-230ENST00000637649 PALLDQ8WX93 1383 aa18.38■□□□□ 0.53
CHRNA7-230ENST00000637649 RRS1Q15050 365 aaKnown RBP18.37■□□□□ 0.53
CHRNA7-230ENST00000637649 RAPGEF4Q8WZA2 1011 aa18.37■□□□□ 0.53
CHRNA7-230ENST00000637649 AK7Q96M32 723 aa18.37■□□□□ 0.53
CHRNA7-230ENST00000637649 KIF3CO14782 793 aa18.36■□□□□ 0.53
CHRNA7-230ENST00000637649 TATP17735 454 aaPredicted RBP18.34■□□□□ 0.53
CHRNA7-230ENST00000637649 C4BP0C0L5 1744 aa18.34■□□□□ 0.53
CHRNA7-230ENST00000637649 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.33■□□□□ 0.52
CHRNA7-230ENST00000637649 CGNL1Q0VF96 1302 aa18.32■□□□□ 0.52
CHRNA7-230ENST00000637649 UBR3Q6ZT12 1888 aa18.32■□□□□ 0.52
CHRNA7-230ENST00000637649 TOGARAM1Q9Y4F4 1720 aa18.32■□□□□ 0.52
CHRNA7-230ENST00000637649 PCDH11XQ9BZA7 1347 aa18.31■□□□□ 0.52
CHRNA7-230ENST00000637649 PCDH11YQ9BZA8 1340 aa18.31■□□□□ 0.52
CHRNA7-230ENST00000637649 ITGB4P16144 1822 aa18.31■□□□□ 0.52
CHRNA7-230ENST00000637649 APLP1P51693 650 aa18.31■□□□□ 0.52
CHRNA7-230ENST00000637649 PCNTO95613 3336 aa18.3■□□□□ 0.52
CHRNA7-230ENST00000637649 SMG6Q86US8 1419 aaKnown RBP18.3■□□□□ 0.52
CHRNA7-230ENST00000637649 RTL1A6NKG5 1358 aa18.3■□□□□ 0.52
CHRNA7-230ENST00000637649 CYP27B1O15528 508 aa18.29■□□□□ 0.52
CHRNA7-230ENST00000637649 HMGB2P26583 209 aaKnown RBP18.29■□□□□ 0.52
CHRNA7-230ENST00000637649 SMARCC1Q92922 1105 aaPredicted RBP18.29■□□□□ 0.52
CHRNA7-230ENST00000637649 GGNBP2Q9H3C7 697 aa18.29■□□□□ 0.52
CHRNA7-230ENST00000637649 HSP90AB2PQ58FF8 381 aa18.28■□□□□ 0.52
CHRNA7-230ENST00000637649 PIGBQ92521 554 aa18.28■□□□□ 0.52
CHRNA7-230ENST00000637649 LINC00116Q8NCU8 138 aa18.27■□□□□ 0.52
CHRNA7-230ENST00000637649 PUS7Q96PZ0 661 aaKnown RBP18.27■□□□□ 0.52
CHRNA7-230ENST00000637649 DNAJC5GQ8N7S2 189 aa18.26■□□□□ 0.51
CHRNA7-230ENST00000637649 GNPATO15228 680 aa18.25■□□□□ 0.51
CHRNA7-230ENST00000637649 MMP10P09238 476 aa18.25■□□□□ 0.51
CHRNA7-230ENST00000637649 SSFA2P28290 1259 aa18.25■□□□□ 0.51
CHRNA7-230ENST00000637649 BCS1LQ9Y276 419 aa18.25■□□□□ 0.51
CHRNA7-230ENST00000637649 N4BP2Q86UW6 1770 aaPredicted RBP18.25■□□□□ 0.51
CHRNA7-230ENST00000637649 NSD3Q9BZ95 1437 aa18.24■□□□□ 0.51
CHRNA7-230ENST00000637649 LOC102724428A0A0B4J2F2 783 aa18.24■□□□□ 0.51
CHRNA7-230ENST00000637649 FYB1O15117 783 aa18.24■□□□□ 0.51
CHRNA7-230ENST00000637649 TOMM70O94826 608 aa18.24■□□□□ 0.51
CHRNA7-230ENST00000637649 SIK1P57059 783 aa18.24■□□□□ 0.51
CHRNA7-230ENST00000637649 NMRK2Q9NPI5 230 aa18.24■□□□□ 0.51
CHRNA7-230ENST00000637649 ST20-MTHFSA0A0A6YYL1 179 aa18.23■□□□□ 0.51
CHRNA7-230ENST00000637649 A0A0G2JLW4 131 aa18.23■□□□□ 0.51
CHRNA7-230ENST00000637649 HTRA3P83110 453 aa18.23■□□□□ 0.51
CHRNA7-230ENST00000637649 ARHGAP27Q6ZUM4 889 aa18.23■□□□□ 0.51
CHRNA7-230ENST00000637649 TESK2Q96S53 571 aa18.23■□□□□ 0.51
CHRNA7-230ENST00000637649 PXDNLA1KZ92 1463 aa18.22■□□□□ 0.51
CHRNA7-230ENST00000637649 INSRP06213 1382 aa18.22■□□□□ 0.51
CHRNA7-230ENST00000637649 MAP2P11137 1827 aaKnown RBP18.22■□□□□ 0.51
CHRNA7-230ENST00000637649 CAPN15O75808 1086 aa18.22■□□□□ 0.51
CHRNA7-230ENST00000637649 ITPK1Q13572 414 aa18.22■□□□□ 0.51
CHRNA7-230ENST00000637649 CICQ96RK0 1608 aaPredicted RBP18.22■□□□□ 0.51
CHRNA7-230ENST00000637649 ASAP1Q9ULH1 1129 aa18.21■□□□□ 0.51
CHRNA7-230ENST00000637649 FLT4P35916 1363 aa18.2■□□□□ 0.5
CHRNA7-230ENST00000637649 ATP6V1AP38606 617 aa18.2■□□□□ 0.5
CHRNA7-230ENST00000637649 TMOD3Q9NYL9 352 aa18.2■□□□□ 0.5
CHRNA7-230ENST00000637649 PKD1L3Q7Z443 1732 aa18.18■□□□□ 0.5
CHRNA7-230ENST00000637649 PPM1GO15355 546 aaPredicted RBP18.18■□□□□ 0.5
CHRNA7-230ENST00000637649 FCHSD2O94868 740 aa18.18■□□□□ 0.5
CHRNA7-230ENST00000637649 COL13A1Q5TAT6 717 aaPredicted RBP18.18■□□□□ 0.5
CHRNA7-230ENST00000637649 EMILIN1Q9Y6C2 1016 aa18.18■□□□□ 0.5
CHRNA7-230ENST00000637649 KIF13BQ9NQT8 1826 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms