RNA–Protein interactions for RNA: ENST00000637352.1

SMARCA2-260, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-260ENST00000637352 SHANK3Q9BYB0 1731 aa11.72□□□□□ -0.53
SMARCA2-260ENST00000637352 GRIN3BO60391 1043 aa11.71□□□□□ -0.53
SMARCA2-260ENST00000637352 SMIM5Q71RC9 77 aa11.71□□□□□ -0.53
SMARCA2-260ENST00000637352 ZCRB1Q8TBF4 217 aaKnown RBP11.71□□□□□ -0.53
SMARCA2-260ENST00000637352 ATP10DQ9P241 1426 aa11.7□□□□□ -0.54
SMARCA2-260ENST00000637352 NSD2O96028 1365 aa11.7□□□□□ -0.54
SMARCA2-260ENST00000637352 ANKRD36BQ8N2N9 1353 aa11.7□□□□□ -0.54
SMARCA2-260ENST00000637352 LTN1O94822 1766 aa11.7□□□□□ -0.54
SMARCA2-260ENST00000637352 AMPHP49418 695 aa11.7□□□□□ -0.54
SMARCA2-260ENST00000637352 CARD11Q9BXL7 1154 aa11.7□□□□□ -0.54
SMARCA2-260ENST00000637352 A0A1W2PP64 1363 aa11.69□□□□□ -0.54
SMARCA2-260ENST00000637352 MAP3K19Q56UN5 1328 aa11.69□□□□□ -0.54
SMARCA2-260ENST00000637352 GPBP1L1Q9HC44 474 aaPredicted RBP11.69□□□□□ -0.54
SMARCA2-260ENST00000637352 MON2Q7Z3U7 1717 aa11.69□□□□□ -0.54
SMARCA2-260ENST00000637352 HOXC9P31274 260 aa11.68□□□□□ -0.54
SMARCA2-260ENST00000637352 RRS1Q15050 365 aaKnown RBP11.68□□□□□ -0.54
SMARCA2-260ENST00000637352 USP47Q96K76 1375 aa11.67□□□□□ -0.54
SMARCA2-260ENST00000637352 TUBGCP6Q96RT7 1819 aa11.67□□□□□ -0.54
SMARCA2-260ENST00000637352 MEGF6O75095 1541 aa11.67□□□□□ -0.54
SMARCA2-260ENST00000637352 PHF14O94880 888 aa11.67□□□□□ -0.54
SMARCA2-260ENST00000637352 COG3Q96JB2 828 aa11.67□□□□□ -0.54
SMARCA2-260ENST00000637352 TERF2IPQ9NYB0 399 aa11.67□□□□□ -0.54
SMARCA2-260ENST00000637352 EDC4Q6P2E9 1401 aaKnown RBP11.67□□□□□ -0.54
SMARCA2-260ENST00000637352 NBPF6Q5VWK0 638 aa11.66□□□□□ -0.54
SMARCA2-260ENST00000637352 MPRIPQ6WCQ1 1025 aa11.66□□□□□ -0.54
SMARCA2-260ENST00000637352 NBPF4Q96M43 638 aa11.66□□□□□ -0.54
SMARCA2-260ENST00000637352 DOT1LQ8TEK3 1739 aa11.66□□□□□ -0.54
SMARCA2-260ENST00000637352 AMIGO3Q86WK7 504 aa11.65□□□□□ -0.54
SMARCA2-260ENST00000637352 CEP350Q5VT06 3117 aa11.65□□□□□ -0.54
SMARCA2-260ENST00000637352 HSPA6P17066 643 aa11.64□□□□□ -0.55
SMARCA2-260ENST00000637352 RAPGEF4Q8WZA2 1011 aa11.63□□□□□ -0.55
SMARCA2-260ENST00000637352 GGNBP2Q9H3C7 697 aa11.63□□□□□ -0.55
SMARCA2-260ENST00000637352 CD2APQ9Y5K6 639 aa11.63□□□□□ -0.55
SMARCA2-260ENST00000637352 PALLDQ8WX93 1383 aa11.63□□□□□ -0.55
SMARCA2-260ENST00000637352 QSER1Q2KHR3 1735 aa11.63□□□□□ -0.55
SMARCA2-260ENST00000637352 IGSF1Q8N6C5 1336 aa11.62□□□□□ -0.55
SMARCA2-260ENST00000637352 USP54Q70EL1 1684 aa11.62□□□□□ -0.55
SMARCA2-260ENST00000637352 TATP17735 454 aaPredicted RBP11.62□□□□□ -0.55
SMARCA2-260ENST00000637352 AK7Q96M32 723 aa11.62□□□□□ -0.55
SMARCA2-260ENST00000637352 COL24A1Q17RW2 1714 aa11.62□□□□□ -0.55
SMARCA2-260ENST00000637352 RGPD2P0DJD1 1756 aa11.62□□□□□ -0.55
SMARCA2-260ENST00000637352 LY75O60449 1722 aa11.61□□□□□ -0.55
SMARCA2-260ENST00000637352 HSP90AB2PQ58FF8 381 aa11.61□□□□□ -0.55
SMARCA2-260ENST00000637352 FAM208AQ9UK61 1670 aaKnown RBP11.61□□□□□ -0.55
SMARCA2-260ENST00000637352 ADCY9O60503 1353 aa11.59□□□□□ -0.55
SMARCA2-260ENST00000637352 ST20-MTHFSA0A0A6YYL1 179 aa11.59□□□□□ -0.55
SMARCA2-260ENST00000637352 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.59□□□□□ -0.55
SMARCA2-260ENST00000637352 KIF3CO14782 793 aa11.59□□□□□ -0.55
SMARCA2-260ENST00000637352 CYP27B1O15528 508 aa11.59□□□□□ -0.55
SMARCA2-260ENST00000637352 FLAD1Q8NFF5 587 aa11.59□□□□□ -0.55
SMARCA2-260ENST00000637352 FYB1O15117 783 aa11.58□□□□□ -0.56
SMARCA2-260ENST00000637352 LINC00116Q8NCU8 138 aa11.58□□□□□ -0.56
SMARCA2-260ENST00000637352 PIGBQ92521 554 aa11.58□□□□□ -0.56
SMARCA2-260ENST00000637352 PCDH11XQ9BZA7 1347 aa11.58□□□□□ -0.56
SMARCA2-260ENST00000637352 PCDH11YQ9BZA8 1340 aa11.58□□□□□ -0.56
SMARCA2-260ENST00000637352 TESK2Q96S53 571 aa11.57□□□□□ -0.56
SMARCA2-260ENST00000637352 SMG6Q86US8 1419 aaKnown RBP11.57□□□□□ -0.56
SMARCA2-260ENST00000637352 C5P01031 1676 aa11.56□□□□□ -0.56
SMARCA2-260ENST00000637352 GNPATO15228 680 aa11.56□□□□□ -0.56
SMARCA2-260ENST00000637352 PPM1GO15355 546 aaPredicted RBP11.56□□□□□ -0.56
SMARCA2-260ENST00000637352 CGNL1Q0VF96 1302 aa11.56□□□□□ -0.56
SMARCA2-260ENST00000637352 HTRA3P83110 453 aa11.55□□□□□ -0.56
SMARCA2-260ENST00000637352 SMARCC1Q92922 1105 aaPredicted RBP11.55□□□□□ -0.56
SMARCA2-260ENST00000637352 PUS7Q96PZ0 661 aaKnown RBP11.55□□□□□ -0.56
SMARCA2-260ENST00000637352 BCS1LQ9Y276 419 aa11.55□□□□□ -0.56
SMARCA2-260ENST00000637352 EMILIN1Q9Y6C2 1016 aa11.55□□□□□ -0.56
SMARCA2-260ENST00000637352 RTL1A6NKG5 1358 aa11.54□□□□□ -0.56
SMARCA2-260ENST00000637352 TONSLQ96HA7 1378 aa11.54□□□□□ -0.56
SMARCA2-260ENST00000637352 LOC102724428A0A0B4J2F2 783 aa11.54□□□□□ -0.56
SMARCA2-260ENST00000637352 A0A0G2JLW4 131 aa11.54□□□□□ -0.56
SMARCA2-260ENST00000637352 MMP10P09238 476 aa11.54□□□□□ -0.56
SMARCA2-260ENST00000637352 ATP6V1AP38606 617 aa11.54□□□□□ -0.56
SMARCA2-260ENST00000637352 SIK1P57059 783 aa11.54□□□□□ -0.56
SMARCA2-260ENST00000637352 ITPK1Q13572 414 aa11.54□□□□□ -0.56
SMARCA2-260ENST00000637352 ASAP1Q9ULH1 1129 aa11.54□□□□□ -0.56
SMARCA2-260ENST00000637352 C4BP0C0L5 1744 aa11.54□□□□□ -0.56
SMARCA2-260ENST00000637352 SSFA2P28290 1259 aa11.53□□□□□ -0.56
SMARCA2-260ENST00000637352 ARHGAP27Q6ZUM4 889 aa11.53□□□□□ -0.56
SMARCA2-260ENST00000637352 NMRK2Q9NPI5 230 aa11.53□□□□□ -0.56
SMARCA2-260ENST00000637352 INSRP06213 1382 aa11.53□□□□□ -0.56
SMARCA2-260ENST00000637352 CAPN15O75808 1086 aa11.52□□□□□ -0.57
SMARCA2-260ENST00000637352 APLP1P51693 650 aa11.52□□□□□ -0.57
SMARCA2-260ENST00000637352 TMOD3Q9NYL9 352 aa11.52□□□□□ -0.57
SMARCA2-260ENST00000637352 TOGARAM1Q9Y4F4 1720 aa11.52□□□□□ -0.57
SMARCA2-260ENST00000637352 FLT4P35916 1363 aa11.51□□□□□ -0.57
SMARCA2-260ENST00000637352 TAF1LQ8IZX4 1826 aa11.51□□□□□ -0.57
SMARCA2-260ENST00000637352 TOMM70O94826 608 aa11.5□□□□□ -0.57
SMARCA2-260ENST00000637352 FCHSD2O94868 740 aa11.5□□□□□ -0.57
SMARCA2-260ENST00000637352 DPEP1P16444 411 aa11.5□□□□□ -0.57
SMARCA2-260ENST00000637352 DNAJC5GQ8N7S2 189 aa11.5□□□□□ -0.57
SMARCA2-260ENST00000637352 RBM42Q9BTD8 480 aaKnown RBP11.5□□□□□ -0.57
SMARCA2-260ENST00000637352 ATG3Q9NT62 314 aa11.5□□□□□ -0.57
SMARCA2-260ENST00000637352 SPG7Q9UQ90 795 aa11.5□□□□□ -0.57
SMARCA2-260ENST00000637352 HMGB2P26583 209 aaKnown RBP11.49□□□□□ -0.57
SMARCA2-260ENST00000637352 TMF1P82094 1093 aa11.49□□□□□ -0.57
SMARCA2-260ENST00000637352 TRAPPC3LQ5T215 181 aa11.49□□□□□ -0.57
SMARCA2-260ENST00000637352 EYA1Q99502 592 aa11.49□□□□□ -0.57
SMARCA2-260ENST00000637352 PXDNLA1KZ92 1463 aa11.49□□□□□ -0.57
SMARCA2-260ENST00000637352 NKX1-1Q15270 411 aaPredicted RBP11.48□□□□□ -0.57
SMARCA2-260ENST00000637352 C9orf131Q5VYM1 1079 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms