RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 C8orf37Q96NL8 207 aa20.01■□□□□ 0.79
CLN6-219ENST00000637329 RCAN3Q9UKA8 241 aa20.01■□□□□ 0.79
CLN6-219ENST00000637329 AXIN2Q9Y2T1 843 aa20.01■□□□□ 0.79
CLN6-219ENST00000637329 COL5A2P05997 1499 aaPredicted RBP20■□□□□ 0.79
CLN6-219ENST00000637329 SPINK5Q9NQ38 1064 aaPredicted RBP20■□□□□ 0.79
CLN6-219ENST00000637329 PRDM11Q9NQV5 511 aa20■□□□□ 0.79
CLN6-219ENST00000637329 SUPT16HQ9Y5B9 1047 aaKnown RBP20■□□□□ 0.79
CLN6-219ENST00000637329 HTATSF1O43719 755 aaKnown RBP19.98■□□□□ 0.79
CLN6-219ENST00000637329 CCDC125Q86Z20 511 aa19.98■□□□□ 0.79
CLN6-219ENST00000637329 CT47B1P0C2W7 299 aaPredicted RBP19.97■□□□□ 0.79
CLN6-219ENST00000637329 FANCIQ9NVI1 1328 aa19.97■□□□□ 0.79
CLN6-219ENST00000637329 MAP3K5Q99683 1374 aa19.96■□□□□ 0.79
CLN6-219ENST00000637329 PARP4Q9UKK3 1724 aaKnown RBP19.96■□□□□ 0.79
CLN6-219ENST00000637329 RGS12O14924 1447 aa19.96■□□□□ 0.79
CLN6-219ENST00000637329 IFT57Q9NWB7 429 aa19.96■□□□□ 0.79
CLN6-219ENST00000637329 WDR17Q8IZU2 1322 aa19.96■□□□□ 0.79
CLN6-219ENST00000637329 PKD1L3Q7Z443 1732 aa19.96■□□□□ 0.79
CLN6-219ENST00000637329 OVOS2A0A0G2JMS6 1433 aa19.95■□□□□ 0.78
CLN6-219ENST00000637329 CHRNA2Q15822 529 aa19.95■□□□□ 0.78
CLN6-219ENST00000637329 MTHFSDQ2M296 383 aaKnown RBP19.95■□□□□ 0.78
CLN6-219ENST00000637329 USHBP1Q8N6Y0 703 aa19.95■□□□□ 0.78
CLN6-219ENST00000637329 GNAI1P63096 354 aa19.94■□□□□ 0.78
CLN6-219ENST00000637329 AMOTQ4VCS5 1084 aa19.94■□□□□ 0.78
CLN6-219ENST00000637329 ERICH6BQ5W0A0 696 aa19.93■□□□□ 0.78
CLN6-219ENST00000637329 PLCH1Q4KWH8 1693 aa19.93■□□□□ 0.78
CLN6-219ENST00000637329 ADAMTS7Q9UKP4 1686 aa19.92■□□□□ 0.78
CLN6-219ENST00000637329 CSB-PGBD3P0DP91 1061 aa19.92■□□□□ 0.78
CLN6-219ENST00000637329 RRP1P56182 461 aaKnown RBP19.92■□□□□ 0.78
CLN6-219ENST00000637329 RTF1Q92541 710 aaKnown RBP19.92■□□□□ 0.78
CLN6-219ENST00000637329 GNAT3A8MTJ3 354 aa19.91■□□□□ 0.78
CLN6-219ENST00000637329 ZNF853P0CG23 659 aa19.91■□□□□ 0.78
CLN6-219ENST00000637329 PLEKHO1Q53GL0 409 aaPredicted RBP19.91■□□□□ 0.78
CLN6-219ENST00000637329 CFAP44Q96MT7 982 aa19.91■□□□□ 0.78
CLN6-219ENST00000637329 NLRP2Q9NX02 1062 aa19.91■□□□□ 0.78
CLN6-219ENST00000637329 CRB1P82279 1406 aa19.91■□□□□ 0.78
CLN6-219ENST00000637329 MEGF6O75095 1541 aa19.91■□□□□ 0.78
CLN6-219ENST00000637329 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.9■□□□□ 0.78
CLN6-219ENST00000637329 NRAPQ86VF7 1730 aa19.89■□□□□ 0.77
CLN6-219ENST00000637329 RAPGEF4Q8WZA2 1011 aa19.89■□□□□ 0.77
CLN6-219ENST00000637329 NWD2Q9ULI1 1742 aa19.89■□□□□ 0.77
CLN6-219ENST00000637329 CEMIPQ8WUJ3 1361 aa19.88■□□□□ 0.77
CLN6-219ENST00000637329 FAM83GA6ND36 823 aa19.88■□□□□ 0.77
CLN6-219ENST00000637329 FKBP8Q14318 412 aa19.88■□□□□ 0.77
CLN6-219ENST00000637329 TRPC5Q9UL62 973 aaPredicted RBP19.88■□□□□ 0.77
CLN6-219ENST00000637329 TATP17735 454 aaPredicted RBP19.87■□□□□ 0.77
CLN6-219ENST00000637329 AKAP4Q5JQC9 854 aa19.87■□□□□ 0.77
CLN6-219ENST00000637329 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.87■□□□□ 0.77
CLN6-219ENST00000637329 TSR2Q969E8 191 aaKnown RBP19.87■□□□□ 0.77
CLN6-219ENST00000637329 ZNF428Q96B54 188 aa19.87■□□□□ 0.77
CLN6-219ENST00000637329 ADAMTS2O95450 1211 aa19.86■□□□□ 0.77
CLN6-219ENST00000637329 THUMPD2Q9BTF0 503 aaKnown RBP19.86■□□□□ 0.77
CLN6-219ENST00000637329 CARD10Q9BWT7 1032 aa19.86■□□□□ 0.77
CLN6-219ENST00000637329 BABAM1Q9NWV8 329 aa19.86■□□□□ 0.77
CLN6-219ENST00000637329 USP21Q9UK80 565 aa19.86■□□□□ 0.77
CLN6-219ENST00000637329 WNK3Q9BYP7 1800 aa19.86■□□□□ 0.77
CLN6-219ENST00000637329 ZNF530Q6P9A1 599 aaPredicted RBP19.85■□□□□ 0.77
CLN6-219ENST00000637329 MCM10Q7L590 875 aa19.85■□□□□ 0.77
CLN6-219ENST00000637329 DCTN1Q14203 1278 aa19.84■□□□□ 0.77
CLN6-219ENST00000637329 C1orf141Q5JVX7 400 aa19.84■□□□□ 0.77
CLN6-219ENST00000637329 TOM1L2Q6ZVM7 507 aa19.84■□□□□ 0.77
CLN6-219ENST00000637329 MBIPQ9NS73 344 aa19.84■□□□□ 0.77
CLN6-219ENST00000637329 SPG7Q9UQ90 795 aa19.84■□□□□ 0.77
CLN6-219ENST00000637329 CHL1O00533 1208 aa19.83■□□□□ 0.77
CLN6-219ENST00000637329 EXOSC9Q06265 439 aaKnown RBP19.83■□□□□ 0.77
CLN6-219ENST00000637329 MRC1P22897 1456 aa19.82■□□□□ 0.76
CLN6-219ENST00000637329 VIRMAQ69YN4 1812 aaKnown RBP19.82■□□□□ 0.76
CLN6-219ENST00000637329 BTG4Q9NY30 223 aa19.82■□□□□ 0.76
CLN6-219ENST00000637329 KDM3BQ7LBC6 1761 aa19.82■□□□□ 0.76
CLN6-219ENST00000637329 SLIT2O94813 1529 aa19.81■□□□□ 0.76
CLN6-219ENST00000637329 SIPA1L3O60292 1781 aaPredicted RBP19.81■□□□□ 0.76
CLN6-219ENST00000637329 RARSP54136 660 aaKnown RBP19.81■□□□□ 0.76
CLN6-219ENST00000637329 LAS1LQ9Y4W2 734 aaKnown RBP19.81■□□□□ 0.76
CLN6-219ENST00000637329 SCN11AQ9UI33 1791 aa19.8■□□□□ 0.76
CLN6-219ENST00000637329 EVA1CP58658 441 aa19.8■□□□□ 0.76
CLN6-219ENST00000637329 SHANK3Q9BYB0 1731 aa19.79■□□□□ 0.76
CLN6-219ENST00000637329 DISP2A7MBM2 1401 aa19.79■□□□□ 0.76
CLN6-219ENST00000637329 ALDH1L2Q3SY69 923 aa19.79■□□□□ 0.76
CLN6-219ENST00000637329 SOS1Q07889 1333 aaPredicted RBP19.78■□□□□ 0.76
CLN6-219ENST00000637329 PCDH11XQ9BZA7 1347 aa19.78■□□□□ 0.76
CLN6-219ENST00000637329 PCDH11YQ9BZA8 1340 aa19.78■□□□□ 0.76
CLN6-219ENST00000637329 IL2RBP14784 551 aa19.78■□□□□ 0.76
CLN6-219ENST00000637329 LARP1Q6PKG0 1096 aaKnown RBP19.78■□□□□ 0.76
CLN6-219ENST00000637329 IL17REQ8NFR9 667 aa19.78■□□□□ 0.76
CLN6-219ENST00000637329 STRN4Q9NRL3 753 aa19.78■□□□□ 0.76
CLN6-219ENST00000637329 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.78■□□□□ 0.76
CLN6-219ENST00000637329 HSP90AB1P08238 724 aaKnown RBP19.77■□□□□ 0.76
CLN6-219ENST00000637329 SF3B2Q13435 895 aaKnown RBP19.77■□□□□ 0.76
CLN6-219ENST00000637329 KIF16BQ96L93 1317 aa19.76■□□□□ 0.75
CLN6-219ENST00000637329 KDM6AO15550 1401 aaPredicted RBP19.76■□□□□ 0.75
CLN6-219ENST00000637329 PHKG2P15735 406 aa19.76■□□□□ 0.75
CLN6-219ENST00000637329 TAF7Q15545 349 aaPredicted RBP19.76■□□□□ 0.75
CLN6-219ENST00000637329 IFNL2Q8IZJ0 200 aa19.76■□□□□ 0.75
CLN6-219ENST00000637329 TSPYL4Q9UJ04 414 aa19.76■□□□□ 0.75
CLN6-219ENST00000637329 RNMTO43148 476 aaKnown RBP19.75■□□□□ 0.75
CLN6-219ENST00000637329 BRPF1P55201 1214 aaPredicted RBP19.75■□□□□ 0.75
CLN6-219ENST00000637329 IRX6P78412 446 aaPredicted RBP19.75■□□□□ 0.75
CLN6-219ENST00000637329 FNBP4Q8N3X1 1017 aaPredicted RBP19.75■□□□□ 0.75
CLN6-219ENST00000637329 EP400Q96L91 3159 aa19.74■□□□□ 0.75
CLN6-219ENST00000637329 BCAR3O75815 825 aa19.74■□□□□ 0.75
CLN6-219ENST00000637329 TEFQ10587 303 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms