RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 THRAP3Q9Y2W1 955 aaKnown RBP17.57■□□□□ 0.4
LINC00643-207ENST00000637212 SPG7Q9UQ90 795 aa17.56■□□□□ 0.4
LINC00643-207ENST00000637212 CALD1Q05682 793 aaKnown RBP17.55■□□□□ 0.4
LINC00643-207ENST00000637212 GOLGA2Q08379 1002 aa17.55■□□□□ 0.4
LINC00643-207ENST00000637212 VPS72Q15906 364 aa17.55■□□□□ 0.4
LINC00643-207ENST00000637212 CDCA7Q9BWT1 371 aaPredicted RBP17.55■□□□□ 0.4
LINC00643-207ENST00000637212 RGS17Q9UGC6 210 aaPredicted RBP17.55■□□□□ 0.4
LINC00643-207ENST00000637212 SENP3-EIF4A1A0A087X0R7 540 aa17.54■□□□□ 0.4
LINC00643-207ENST00000637212 IL2RBP14784 551 aa17.54■□□□□ 0.4
LINC00643-207ENST00000637212 IL16Q14005 1332 aa17.53■□□□□ 0.4
LINC00643-207ENST00000637212 SPATA31A1Q5TZJ5 1347 aa17.53■□□□□ 0.4
LINC00643-207ENST00000637212 SPATA31A5Q5VU36 1347 aa17.53■□□□□ 0.4
LINC00643-207ENST00000637212 SPATA31A7Q8IWB4 1347 aa17.53■□□□□ 0.4
LINC00643-207ENST00000637212 GNAT3A8MTJ3 354 aa17.53■□□□□ 0.4
LINC00643-207ENST00000637212 AKAP4Q5JQC9 854 aa17.53■□□□□ 0.4
LINC00643-207ENST00000637212 RTF1Q92541 710 aaKnown RBP17.53■□□□□ 0.4
LINC00643-207ENST00000637212 USP21Q9UK80 565 aa17.53■□□□□ 0.4
LINC00643-207ENST00000637212 LRP6O75581 1613 aa17.53■□□□□ 0.4
LINC00643-207ENST00000637212 BCL9LQ86UU0 1499 aa17.51■□□□□ 0.39
LINC00643-207ENST00000637212 E9PSI1 815 aa17.51■□□□□ 0.39
LINC00643-207ENST00000637212 BARGINQ6ZT62 677 aa17.51■□□□□ 0.39
LINC00643-207ENST00000637212 ZCRB1Q8TBF4 217 aaKnown RBP17.51■□□□□ 0.39
LINC00643-207ENST00000637212 SLFN5Q08AF3 891 aa17.5■□□□□ 0.39
LINC00643-207ENST00000637212 C1orf141Q5JVX7 400 aa17.5■□□□□ 0.39
LINC00643-207ENST00000637212 ZNF530Q6P9A1 599 aaPredicted RBP17.5■□□□□ 0.39
LINC00643-207ENST00000637212 TRMT2AQ8IZ69 625 aaKnown RBP17.5■□□□□ 0.39
LINC00643-207ENST00000637212 FAM208AQ9UK61 1670 aaKnown RBP17.5■□□□□ 0.39
LINC00643-207ENST00000637212 IFNL2Q8IZJ0 200 aa17.49■□□□□ 0.39
LINC00643-207ENST00000637212 USP35Q9P2H5 1018 aa17.49■□□□□ 0.39
LINC00643-207ENST00000637212 AFF2P51816 1311 aa17.48■□□□□ 0.39
LINC00643-207ENST00000637212 RGPD5Q99666 1765 aa17.48■□□□□ 0.39
LINC00643-207ENST00000637212 HSP90AB1P08238 724 aaKnown RBP17.48■□□□□ 0.39
LINC00643-207ENST00000637212 CCDC9Q9Y3X0 531 aaKnown RBP17.48■□□□□ 0.39
LINC00643-207ENST00000637212 MAP3K5Q99683 1374 aa17.48■□□□□ 0.39
LINC00643-207ENST00000637212 OVOS2A0A0G2JMS6 1433 aa17.47■□□□□ 0.39
LINC00643-207ENST00000637212 EXOC5O00471 708 aa17.47■□□□□ 0.39
LINC00643-207ENST00000637212 IL17REQ8NFR9 667 aa17.47■□□□□ 0.39
LINC00643-207ENST00000637212 CDCA7LQ96GN5 454 aa17.47■□□□□ 0.39
LINC00643-207ENST00000637212 MYH16Q9H6N6 1097 aa17.47■□□□□ 0.39
LINC00643-207ENST00000637212 TRPC5Q9UL62 973 aaPredicted RBP17.47■□□□□ 0.39
LINC00643-207ENST00000637212 PHKG2P15735 406 aa17.46■□□□□ 0.39
LINC00643-207ENST00000637212 POTEAQ6S8J7 498 aa17.46■□□□□ 0.39
LINC00643-207ENST00000637212 MEGF6O75095 1541 aa17.46■□□□□ 0.39
LINC00643-207ENST00000637212 NWD2Q9ULI1 1742 aa17.45■□□□□ 0.38
LINC00643-207ENST00000637212 ZNF853P0CG23 659 aa17.45■□□□□ 0.38
LINC00643-207ENST00000637212 GNAI1P63096 354 aa17.45■□□□□ 0.38
LINC00643-207ENST00000637212 NKX1-1Q15270 411 aaPredicted RBP17.45■□□□□ 0.38
LINC00643-207ENST00000637212 MCM10Q7L590 875 aa17.45■□□□□ 0.38
LINC00643-207ENST00000637212 GJD4Q96KN9 370 aaPredicted RBP17.45■□□□□ 0.38
LINC00643-207ENST00000637212 IFT57Q9NWB7 429 aa17.45■□□□□ 0.38
LINC00643-207ENST00000637212 BABAM1Q9NWV8 329 aa17.45■□□□□ 0.38
LINC00643-207ENST00000637212 DISP2A7MBM2 1401 aa17.45■□□□□ 0.38
LINC00643-207ENST00000637212 PCDH11XQ9BZA7 1347 aa17.45■□□□□ 0.38
LINC00643-207ENST00000637212 PCDH11YQ9BZA8 1340 aa17.45■□□□□ 0.38
LINC00643-207ENST00000637212 CYP27B1O15528 508 aa17.44■□□□□ 0.38
LINC00643-207ENST00000637212 DCTN1Q14203 1278 aa17.44■□□□□ 0.38
LINC00643-207ENST00000637212 DUSP27Q5VZP5 1158 aa17.44■□□□□ 0.38
LINC00643-207ENST00000637212 DCAF5Q96JK2 942 aa17.44■□□□□ 0.38
LINC00643-207ENST00000637212 CFAP44Q96MT7 982 aa17.44■□□□□ 0.38
LINC00643-207ENST00000637212 SPINK5Q9NQ38 1064 aaPredicted RBP17.44■□□□□ 0.38
LINC00643-207ENST00000637212 CHL1O00533 1208 aa17.43■□□□□ 0.38
LINC00643-207ENST00000637212 RNMTO43148 476 aaKnown RBP17.43■□□□□ 0.38
LINC00643-207ENST00000637212 ONECUT3O60422 494 aaPredicted RBP17.43■□□□□ 0.38
LINC00643-207ENST00000637212 ZNF772Q68DY9 489 aaPredicted RBP17.43■□□□□ 0.38
LINC00643-207ENST00000637212 QTRT2Q9H974 415 aaKnown RBP17.43■□□□□ 0.38
LINC00643-207ENST00000637212 PLCH1Q4KWH8 1693 aa17.42■□□□□ 0.38
LINC00643-207ENST00000637212 CEMIPQ8WUJ3 1361 aa17.42■□□□□ 0.38
LINC00643-207ENST00000637212 TAF7Q15545 349 aaPredicted RBP17.42■□□□□ 0.38
LINC00643-207ENST00000637212 THUMPD2Q9BTF0 503 aaKnown RBP17.42■□□□□ 0.38
LINC00643-207ENST00000637212 LGR6Q9HBX8 967 aa17.42■□□□□ 0.38
LINC00643-207ENST00000637212 RGPD2P0DJD1 1756 aa17.41■□□□□ 0.38
LINC00643-207ENST00000637212 ATRNO75882 1429 aa17.41■□□□□ 0.38
LINC00643-207ENST00000637212 MPRIPQ6WCQ1 1025 aa17.41■□□□□ 0.38
LINC00643-207ENST00000637212 DDX54Q8TDD1 881 aaKnown RBP17.41■□□□□ 0.38
LINC00643-207ENST00000637212 DDB1Q16531 1140 aa17.4■□□□□ 0.38
LINC00643-207ENST00000637212 NRAPQ86VF7 1730 aa17.4■□□□□ 0.38
LINC00643-207ENST00000637212 ERVV-2B6SEH9 535 aa17.39■□□□□ 0.37
LINC00643-207ENST00000637212 TEFQ10587 303 aa17.39■□□□□ 0.37
LINC00643-207ENST00000637212 FAM98CQ17RN3 349 aaKnown RBP17.39■□□□□ 0.37
LINC00643-207ENST00000637212 LAS1LQ9Y4W2 734 aaKnown RBP17.38■□□□□ 0.37
LINC00643-207ENST00000637212 CT47B1P0C2W7 299 aaPredicted RBP17.37■□□□□ 0.37
LINC00643-207ENST00000637212 SLC52A2Q9HAB3 445 aa17.36■□□□□ 0.37
LINC00643-207ENST00000637212 MBIPQ9NS73 344 aa17.36■□□□□ 0.37
LINC00643-207ENST00000637212 FANCIQ9NVI1 1328 aa17.36■□□□□ 0.37
LINC00643-207ENST00000637212 TSPYL4Q9UJ04 414 aa17.35■□□□□ 0.37
LINC00643-207ENST00000637212 CABP4P57796 275 aa17.34■□□□□ 0.37
LINC00643-207ENST00000637212 RBM6P78332 1123 aaKnown RBP17.34■□□□□ 0.37
LINC00643-207ENST00000637212 TSR2Q969E8 191 aaKnown RBP17.34■□□□□ 0.37
LINC00643-207ENST00000637212 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.34■□□□□ 0.37
LINC00643-207ENST00000637212 PARP4Q9UKK3 1724 aaKnown RBP17.33■□□□□ 0.37
LINC00643-207ENST00000637212 TNS2Q63HR2 1409 aa17.33■□□□□ 0.36
LINC00643-207ENST00000637212 BTBD11A6QL63 1104 aa17.33■□□□□ 0.36
LINC00643-207ENST00000637212 MARCH10Q8NA82 808 aaPredicted RBP17.33■□□□□ 0.36
LINC00643-207ENST00000637212 NFATC2IPQ8NCF5 419 aa17.33■□□□□ 0.36
LINC00643-207ENST00000637212 ZNF428Q96B54 188 aa17.33■□□□□ 0.36
LINC00643-207ENST00000637212 PKD1L3Q7Z443 1732 aa17.33■□□□□ 0.36
LINC00643-207ENST00000637212 KDM6AO15550 1401 aaPredicted RBP17.32■□□□□ 0.36
LINC00643-207ENST00000637212 EXOSC9Q06265 439 aaKnown RBP17.32■□□□□ 0.36
LINC00643-207ENST00000637212 MIS18AQ9NYP9 233 aa17.32■□□□□ 0.36
LINC00643-207ENST00000637212 SOS1Q07889 1333 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms