RNA–Protein interactions for RNA: ENST00000636898.1

CHRNA7-221, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,057 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-221ENST00000636898 RTN4Q9NQC3 1192 aaKnown RBP19.99■□□□□ 0.79
CHRNA7-221ENST00000636898 PLEKHM2Q8IWE5 1019 aa19.98■□□□□ 0.79
CHRNA7-221ENST00000636898 PTPRUQ92729 1446 aa19.98■□□□□ 0.79
CHRNA7-221ENST00000636898 MCM10Q7L590 875 aa19.98■□□□□ 0.79
CHRNA7-221ENST00000636898 KDRP35968 1356 aa19.96■□□□□ 0.79
CHRNA7-221ENST00000636898 SLIT1O75093 1534 aa19.96■□□□□ 0.79
CHRNA7-221ENST00000636898 SBNO1A3KN83 1393 aa19.96■□□□□ 0.79
CHRNA7-221ENST00000636898 FLT4P35916 1363 aa19.96■□□□□ 0.79
CHRNA7-221ENST00000636898 HSP90AB1P08238 724 aaKnown RBP19.96■□□□□ 0.79
CHRNA7-221ENST00000636898 GSPT1P15170 499 aaKnown RBP19.96■□□□□ 0.79
CHRNA7-221ENST00000636898 RTL1A6NKG5 1358 aa19.95■□□□□ 0.78
CHRNA7-221ENST00000636898 KRT24Q2M2I5 525 aa19.95■□□□□ 0.78
CHRNA7-221ENST00000636898 CEP85Q6P2H3 762 aa19.95■□□□□ 0.78
CHRNA7-221ENST00000636898 EID1Q9Y6B2 187 aa19.95■□□□□ 0.78
CHRNA7-221ENST00000636898 FSD2A1L4K1 749 aa19.95■□□□□ 0.78
CHRNA7-221ENST00000636898 TRAK2O60296 914 aa19.95■□□□□ 0.78
CHRNA7-221ENST00000636898 TTC22Q5TAA0 569 aa19.95■□□□□ 0.78
CHRNA7-221ENST00000636898 ARHGAP23Q9P227 1491 aa19.94■□□□□ 0.78
CHRNA7-221ENST00000636898 MSH6P52701 1360 aa19.94■□□□□ 0.78
CHRNA7-221ENST00000636898 MAP3K19Q56UN5 1328 aa19.94■□□□□ 0.78
CHRNA7-221ENST00000636898 RIMS1Q86UR5 1692 aaKnown RBP19.93■□□□□ 0.78
CHRNA7-221ENST00000636898 K7ELQ4 463 aaPredicted RBP19.93■□□□□ 0.78
CHRNA7-221ENST00000636898 TBX22Q9Y458 520 aa19.93■□□□□ 0.78
CHRNA7-221ENST00000636898 DIP2AQ14689 1571 aa19.92■□□□□ 0.78
CHRNA7-221ENST00000636898 NUTM2FA1L443 756 aa19.92■□□□□ 0.78
CHRNA7-221ENST00000636898 GOLGA6L3A6NEY3 463 aa19.91■□□□□ 0.78
CHRNA7-221ENST00000636898 RAB3GAP1Q15042 981 aa19.91■□□□□ 0.78
CHRNA7-221ENST00000636898 FAM43AQ8N2R8 423 aa19.91■□□□□ 0.78
CHRNA7-221ENST00000636898 RTF1Q92541 710 aaKnown RBP19.91■□□□□ 0.78
CHRNA7-221ENST00000636898 SLC26A8Q96RN1 970 aa19.91■□□□□ 0.78
CHRNA7-221ENST00000636898 AMOTL2Q9Y2J4 779 aa19.91■□□□□ 0.78
CHRNA7-221ENST00000636898 SLC4A2P04920 1241 aa19.9■□□□□ 0.78
CHRNA7-221ENST00000636898 PTMSP20962 102 aa19.9■□□□□ 0.78
CHRNA7-221ENST00000636898 GBP4Q96PP9 640 aa19.9■□□□□ 0.78
CHRNA7-221ENST00000636898 IGSF1Q8N6C5 1336 aa19.9■□□□□ 0.78
CHRNA7-221ENST00000636898 MTHFSDQ2M296 383 aaKnown RBP19.9■□□□□ 0.78
CHRNA7-221ENST00000636898 GAS2L2Q8NHY3 880 aa19.9■□□□□ 0.78
CHRNA7-221ENST00000636898 TNPO1Q92973 898 aaKnown RBP19.9■□□□□ 0.78
CHRNA7-221ENST00000636898 PIK3C2AO00443 1686 aa19.89■□□□□ 0.77
CHRNA7-221ENST00000636898 HTATSF1O43719 755 aaKnown RBP19.89■□□□□ 0.77
CHRNA7-221ENST00000636898 MEIS3Q99687 375 aa19.89■□□□□ 0.77
CHRNA7-221ENST00000636898 ISY1Q9ULR0 285 aaKnown RBP19.89■□□□□ 0.77
CHRNA7-221ENST00000636898 LRRC37A3O60309 1634 aa19.89■□□□□ 0.77
CHRNA7-221ENST00000636898 HMMRO75330 724 aa19.88■□□□□ 0.77
CHRNA7-221ENST00000636898 CD2BP2O95400 341 aaKnown RBP19.88■□□□□ 0.77
CHRNA7-221ENST00000636898 CCT4P50991 539 aaKnown RBP19.88■□□□□ 0.77
CHRNA7-221ENST00000636898 RABEP1Q15276 862 aa19.88■□□□□ 0.77
CHRNA7-221ENST00000636898 TSPYL4Q9UJ04 414 aa19.88■□□□□ 0.77
CHRNA7-221ENST00000636898 HSP90AA1P07900 732 aaKnown RBP19.88■□□□□ 0.77
CHRNA7-221ENST00000636898 RGPD8O14715 1765 aaPredicted RBP19.87■□□□□ 0.77
CHRNA7-221ENST00000636898 CASC1Q6TDU7 716 aa19.87■□□□□ 0.77
CHRNA7-221ENST00000636898 C16orf71Q8IYS4 520 aaPredicted RBP19.87■□□□□ 0.77
CHRNA7-221ENST00000636898 NGDNQ8NEJ9 315 aaKnown RBP19.87■□□□□ 0.77
CHRNA7-221ENST00000636898 USP54Q70EL1 1684 aa19.86■□□□□ 0.77
CHRNA7-221ENST00000636898 ANKARQ7Z5J8 1434 aa19.86■□□□□ 0.77
CHRNA7-221ENST00000636898 CEP170BQ9Y4F5 1589 aaPredicted RBP19.86■□□□□ 0.77
CHRNA7-221ENST00000636898 XRN1Q8IZH2 1706 aaKnown RBP19.86■□□□□ 0.77
CHRNA7-221ENST00000636898 SOX12O15370 315 aa19.85■□□□□ 0.77
CHRNA7-221ENST00000636898 FOXO3O43524 673 aa19.85■□□□□ 0.77
CHRNA7-221ENST00000636898 XRCC6P12956 609 aaKnown RBP eCLIP19.85■□□□□ 0.77
CHRNA7-221ENST00000636898 EYA1Q99502 592 aa19.85■□□□□ 0.77
CHRNA7-221ENST00000636898 USP26Q9BXU7 913 aa19.85■□□□□ 0.77
CHRNA7-221ENST00000636898 SOS1Q07889 1333 aaPredicted RBP19.85■□□□□ 0.77
CHRNA7-221ENST00000636898 AMPHP49418 695 aa19.85■□□□□ 0.77
CHRNA7-221ENST00000636898 SKOR2Q2VWA4 1001 aaPredicted RBP19.85■□□□□ 0.77
CHRNA7-221ENST00000636898 RBM42Q9BTD8 480 aaKnown RBP19.85■□□□□ 0.77
CHRNA7-221ENST00000636898 SDSP20132 328 aa19.84■□□□□ 0.77
CHRNA7-221ENST00000636898 CLEC17AQ6ZS10 378 aa19.84■□□□□ 0.77
CHRNA7-221ENST00000636898 GZF1Q9H116 711 aaPredicted RBP19.84■□□□□ 0.77
CHRNA7-221ENST00000636898 OSBPL3Q9H4L5 887 aa19.84■□□□□ 0.77
CHRNA7-221ENST00000636898 CACNA1FO60840 1977 aa19.84■□□□□ 0.77
CHRNA7-221ENST00000636898 MIS18AQ9NYP9 233 aa19.83■□□□□ 0.77
CHRNA7-221ENST00000636898 MRE11P49959 708 aa19.83■□□□□ 0.76
CHRNA7-221ENST00000636898 OTUD7AQ8TE49 926 aaPredicted RBP19.83■□□□□ 0.76
CHRNA7-221ENST00000636898 CEBPAP49715 358 aaPredicted RBP19.82■□□□□ 0.76
CHRNA7-221ENST00000636898 STK31Q9BXU1 1019 aa19.82■□□□□ 0.76
CHRNA7-221ENST00000636898 FAM208AQ9UK61 1670 aaKnown RBP19.82■□□□□ 0.76
CHRNA7-221ENST00000636898 G2E3Q7L622 706 aa19.82■□□□□ 0.76
CHRNA7-221ENST00000636898 BABAM1Q9NWV8 329 aa19.82■□□□□ 0.76
CHRNA7-221ENST00000636898 MARF1Q9Y4F3 1742 aaKnown RBP19.81■□□□□ 0.76
CHRNA7-221ENST00000636898 THEMISQ8N1K5 641 aaPredicted RBP19.81■□□□□ 0.76
CHRNA7-221ENST00000636898 N4BP2Q86UW6 1770 aaPredicted RBP19.81■□□□□ 0.76
CHRNA7-221ENST00000636898 SMARCA5O60264 1052 aaPredicted RBP19.8■□□□□ 0.76
CHRNA7-221ENST00000636898 REC8O95072 547 aa19.8■□□□□ 0.76
CHRNA7-221ENST00000636898 GNAI2P04899 355 aa19.8■□□□□ 0.76
CHRNA7-221ENST00000636898 NWD1Q149M9 1564 aa19.8■□□□□ 0.76
CHRNA7-221ENST00000636898 GNAT3A8MTJ3 354 aa19.79■□□□□ 0.76
CHRNA7-221ENST00000636898 CCDC30Q5VVM6 783 aa19.79■□□□□ 0.76
CHRNA7-221ENST00000636898 SLC4A10Q6U841 1118 aa19.79■□□□□ 0.76
CHRNA7-221ENST00000636898 F6X3S4 739 aa19.79■□□□□ 0.76
CHRNA7-221ENST00000636898 NLRP6P59044 892 aa19.79■□□□□ 0.76
CHRNA7-221ENST00000636898 HOXC9P31274 260 aa19.78■□□□□ 0.76
CHRNA7-221ENST00000636898 FER1L4A9Z1Z3 1794 aa19.78■□□□□ 0.76
CHRNA7-221ENST00000636898 GNAI3P08754 354 aa19.77■□□□□ 0.76
CHRNA7-221ENST00000636898 PXDNLA1KZ92 1463 aa19.77■□□□□ 0.76
CHRNA7-221ENST00000636898 GOLGA6L22H0YM25 854 aa19.77■□□□□ 0.75
CHRNA7-221ENST00000636898 PDE1AP54750 535 aa19.77■□□□□ 0.75
CHRNA7-221ENST00000636898 FLIIQ13045 1269 aa19.77■□□□□ 0.75
CHRNA7-221ENST00000636898 MAP3K5Q99683 1374 aa19.77■□□□□ 0.75
CHRNA7-221ENST00000636898 APBB1O00213 710 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms