RNA–Protein interactions for RNA: ENST00000636850.1

CHRNA7-220, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 916 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-220ENST00000636850 PTF1AQ7RTS3 328 aa28.15■■■□□ 2.1
CHRNA7-220ENST00000636850 PKD1L3Q7Z443 1732 aa28.15■■■□□ 2.1
CHRNA7-220ENST00000636850 RAPGEF4Q8WZA2 1011 aa28.14■■■□□ 2.1
CHRNA7-220ENST00000636850 NCAPD2Q15021 1401 aa28.14■■■□□ 2.1
CHRNA7-220ENST00000636850 DDX54Q8TDD1 881 aaKnown RBP28.12■■■□□ 2.09
CHRNA7-220ENST00000636850 TATP17735 454 aaPredicted RBP28.1■■■□□ 2.09
CHRNA7-220ENST00000636850 ZCRB1Q8TBF4 217 aaKnown RBP28.1■■■□□ 2.09
CHRNA7-220ENST00000636850 ACSBG1Q96GR2 724 aa28.1■■■□□ 2.09
CHRNA7-220ENST00000636850 PER1O15534 1290 aaPredicted RBP28.08■■■□□ 2.09
CHRNA7-220ENST00000636850 KCNQ2O43526 872 aa28.08■■■□□ 2.09
CHRNA7-220ENST00000636850 PLSCR1O15162 318 aa28.07■■■□□ 2.08
CHRNA7-220ENST00000636850 EIF4A2Q14240 407 aaKnown RBP28.07■■■□□ 2.08
CHRNA7-220ENST00000636850 PSDA5PKW4 1024 aaPredicted RBP28.06■■■□□ 2.08
CHRNA7-220ENST00000636850 EYA1Q99502 592 aa28.05■■■□□ 2.08
CHRNA7-220ENST00000636850 PCDH11XQ9BZA7 1347 aa28.03■■■□□ 2.08
CHRNA7-220ENST00000636850 PCDH11YQ9BZA8 1340 aa28.03■■■□□ 2.08
CHRNA7-220ENST00000636850 CC2D1BQ5T0F9 858 aaKnown RBP28.03■■■□□ 2.08
CHRNA7-220ENST00000636850 SRCAPQ6ZRS2 3230 aa28.03■■■□□ 2.08
CHRNA7-220ENST00000636850 NPC1L1Q9UHC9 1359 aa28.02■■■□□ 2.08
CHRNA7-220ENST00000636850 R3HDM1Q15032 1099 aaKnown RBP28.02■■■□□ 2.08
CHRNA7-220ENST00000636850 TOGARAM1Q9Y4F4 1720 aa28.01■■■□□ 2.07
CHRNA7-220ENST00000636850 LRP5O75197 1615 aa28■■■□□ 2.07
CHRNA7-220ENST00000636850 IGSF1Q8N6C5 1336 aa28■■■□□ 2.07
CHRNA7-220ENST00000636850 ITGB4P16144 1822 aa27.99■■■□□ 2.07
CHRNA7-220ENST00000636850 NBPF14Q5TI25 921 aa27.98■■■□□ 2.07
CHRNA7-220ENST00000636850 SYTL4Q96C24 671 aaPredicted RBP27.97■■■□□ 2.07
CHRNA7-220ENST00000636850 LY75O60449 1722 aa27.96■■■□□ 2.07
CHRNA7-220ENST00000636850 CNGB1Q14028 1251 aaPredicted RBP27.95■■■□□ 2.06
CHRNA7-220ENST00000636850 TXNRD1Q16881 649 aa27.95■■■□□ 2.06
CHRNA7-220ENST00000636850 PROM2Q8N271 834 aa27.95■■■□□ 2.06
CHRNA7-220ENST00000636850 SPG7Q9UQ90 795 aa27.95■■■□□ 2.06
CHRNA7-220ENST00000636850 PLEKHG2Q9H7P9 1386 aa27.95■■■□□ 2.06
CHRNA7-220ENST00000636850 PAPPAQ13219 1627 aa27.94■■■□□ 2.06
CHRNA7-220ENST00000636850 CYP27B1O15528 508 aa27.94■■■□□ 2.06
CHRNA7-220ENST00000636850 PRIM1P49642 420 aaKnown RBP27.94■■■□□ 2.06
CHRNA7-220ENST00000636850 MTHFSP49914 203 aa27.93■■■□□ 2.06
CHRNA7-220ENST00000636850 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.92■■■□□ 2.06
CHRNA7-220ENST00000636850 ANO8Q9HCE9 1232 aaPredicted RBP27.91■■■□□ 2.06
CHRNA7-220ENST00000636850 CASZ1Q86V15 1759 aa27.89■■■□□ 2.06
CHRNA7-220ENST00000636850 IL13P35225 146 aa27.89■■■□□ 2.06
CHRNA7-220ENST00000636850 AEBP1Q8IUX7 1158 aa27.87■■■□□ 2.05
CHRNA7-220ENST00000636850 KDRP35968 1356 aa27.86■■■□□ 2.05
CHRNA7-220ENST00000636850 COL3A1P02461 1466 aaPredicted RBP27.86■■■□□ 2.05
CHRNA7-220ENST00000636850 NKX1-1Q15270 411 aaPredicted RBP27.84■■■□□ 2.05
CHRNA7-220ENST00000636850 SULT6B1Q6IMI4 303 aa27.84■■■□□ 2.05
CHRNA7-220ENST00000636850 PHKG2P15735 406 aa27.83■■■□□ 2.05
CHRNA7-220ENST00000636850 IFNL2Q8IZJ0 200 aa27.83■■■□□ 2.05
CHRNA7-220ENST00000636850 STK32BQ9NY57 414 aa27.83■■■□□ 2.05
CHRNA7-220ENST00000636850 TUBGCP6Q96RT7 1819 aa27.82■■■□□ 2.04
CHRNA7-220ENST00000636850 QSER1Q2KHR3 1735 aa27.81■■■□□ 2.04
CHRNA7-220ENST00000636850 VIRMAQ69YN4 1812 aaKnown RBP27.81■■■□□ 2.04
CHRNA7-220ENST00000636850 DIAPH1O60610 1272 aaKnown RBP27.81■■■□□ 2.04
CHRNA7-220ENST00000636850 PLEKHO1Q53GL0 409 aaPredicted RBP27.81■■■□□ 2.04
CHRNA7-220ENST00000636850 SLC27A3Q5K4L6 730 aa27.81■■■□□ 2.04
CHRNA7-220ENST00000636850 C5P01031 1676 aa27.81■■■□□ 2.04
CHRNA7-220ENST00000636850 TAF1LQ8IZX4 1826 aa27.81■■■□□ 2.04
CHRNA7-220ENST00000636850 MPRIPQ6WCQ1 1025 aa27.8■■■□□ 2.04
CHRNA7-220ENST00000636850 LRRC4BQ9NT99 713 aa27.8■■■□□ 2.04
CHRNA7-220ENST00000636850 SLC15A2Q16348 729 aa27.78■■■□□ 2.04
CHRNA7-220ENST00000636850 AMOTQ4VCS5 1084 aa27.78■■■□□ 2.04
CHRNA7-220ENST00000636850 ZNF530Q6P9A1 599 aaPredicted RBP27.78■■■□□ 2.04
CHRNA7-220ENST00000636850 SCN11AQ9UI33 1791 aa27.77■■■□□ 2.04
CHRNA7-220ENST00000636850 PALLDQ8WX93 1383 aa27.76■■■□□ 2.03
CHRNA7-220ENST00000636850 HMOX1P09601 288 aa27.75■■■□□ 2.03
CHRNA7-220ENST00000636850 KCNQ4P56696 695 aa27.75■■■□□ 2.03
CHRNA7-220ENST00000636850 CCNL1Q9UK58 526 aaPredicted RBP27.75■■■□□ 2.03
CHRNA7-220ENST00000636850 HSP90AB1P08238 724 aaKnown RBP27.74■■■□□ 2.03
CHRNA7-220ENST00000636850 TMOD3Q9NYL9 352 aa27.74■■■□□ 2.03
CHRNA7-220ENST00000636850 KDM6AO15550 1401 aaPredicted RBP27.74■■■□□ 2.03
CHRNA7-220ENST00000636850 ZNF827Q17R98 1081 aa27.73■■■□□ 2.03
CHRNA7-220ENST00000636850 C1orf141Q5JVX7 400 aa27.73■■■□□ 2.03
CHRNA7-220ENST00000636850 PIGBQ92521 554 aa27.73■■■□□ 2.03
CHRNA7-220ENST00000636850 PPP2R1AP30153 589 aa27.72■■■□□ 2.03
CHRNA7-220ENST00000636850 CFAP53Q96M91 514 aa27.72■■■□□ 2.03
CHRNA7-220ENST00000636850 PDGFDQ9GZP0 370 aaPredicted RBP27.72■■■□□ 2.03
CHRNA7-220ENST00000636850 SMARCC1Q92922 1105 aaPredicted RBP27.71■■■□□ 2.03
CHRNA7-220ENST00000636850 DCAF5Q96JK2 942 aa27.71■■■□□ 2.03
CHRNA7-220ENST00000636850 U2SURPO15042 1029 aaKnown RBP27.7■■■□□ 2.02
CHRNA7-220ENST00000636850 ZEB1P37275 1124 aaPredicted RBP27.69■■■□□ 2.02
CHRNA7-220ENST00000636850 AKT1S1Q96B36 256 aa27.69■■■□□ 2.02
CHRNA7-220ENST00000636850 SPON1Q9HCB6 807 aa27.69■■■□□ 2.02
CHRNA7-220ENST00000636850 C4BP0C0L5 1744 aa27.67■■■□□ 2.02
CHRNA7-220ENST00000636850 ERVV-2B6SEH9 535 aa27.66■■■□□ 2.02
CHRNA7-220ENST00000636850 ZBTB7AO95365 584 aa27.65■■■□□ 2.02
CHRNA7-220ENST00000636850 ADAMTS7Q9UKP4 1686 aa27.65■■■□□ 2.02
CHRNA7-220ENST00000636850 ASAP1Q9ULH1 1129 aa27.64■■■□□ 2.02
CHRNA7-220ENST00000636850 ZNF831Q5JPB2 1677 aa27.63■■■□□ 2.01
CHRNA7-220ENST00000636850 DDX10Q13206 875 aaKnown RBP27.63■■■□□ 2.01
CHRNA7-220ENST00000636850 AKAP4Q5JQC9 854 aa27.63■■■□□ 2.01
CHRNA7-220ENST00000636850 UBR3Q6ZT12 1888 aa27.63■■■□□ 2.01
CHRNA7-220ENST00000636850 CABP4P57796 275 aa27.62■■■□□ 2.01
CHRNA7-220ENST00000636850 TFCP2L1Q9NZI6 479 aa27.62■■■□□ 2.01
CHRNA7-220ENST00000636850 PNPLA7Q6ZV29 1317 aa27.62■■■□□ 2.01
CHRNA7-220ENST00000636850 ATG3Q9NT62 314 aa27.61■■■□□ 2.01
CHRNA7-220ENST00000636850 NUDCQ9Y266 331 aa27.61■■■□□ 2.01
CHRNA7-220ENST00000636850 MRC1P22897 1456 aa27.61■■■□□ 2.01
CHRNA7-220ENST00000636850 LOC102724428A0A0B4J2F2 783 aa27.6■■■□□ 2.01
CHRNA7-220ENST00000636850 HMGB2P26583 209 aaKnown RBP27.6■■■□□ 2.01
CHRNA7-220ENST00000636850 SIK1P57059 783 aa27.6■■■□□ 2.01
CHRNA7-220ENST00000636850 MTHFSDQ2M296 383 aaKnown RBP27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms