RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 BCL11BQ9C0K0 894 aaPredicted RBP11.01□□□□□ -0.65
PNKP-226ENST00000636840 IGSF1Q8N6C5 1336 aa11.01□□□□□ -0.65
PNKP-226ENST00000636840 NEFMP07197 916 aa11□□□□□ -0.65
PNKP-226ENST00000636840 IFNL2Q8IZJ0 200 aa11□□□□□ -0.65
PNKP-226ENST00000636840 PCDH11XQ9BZA7 1347 aa11□□□□□ -0.65
PNKP-226ENST00000636840 PCDH11YQ9BZA8 1340 aa11□□□□□ -0.65
PNKP-226ENST00000636840 PEAK1Q9H792 1746 aa10.99□□□□□ -0.65
PNKP-226ENST00000636840 PARP4Q9UKK3 1724 aaKnown RBP10.99□□□□□ -0.65
PNKP-226ENST00000636840 HSP90AB1P08238 724 aaKnown RBP10.99□□□□□ -0.65
PNKP-226ENST00000636840 HMGB2P26583 209 aaKnown RBP10.99□□□□□ -0.65
PNKP-226ENST00000636840 C1orf141Q5JVX7 400 aa10.99□□□□□ -0.65
PNKP-226ENST00000636840 PNNQ9H307 717 aaKnown RBP10.99□□□□□ -0.65
PNKP-226ENST00000636840 TNS2Q63HR2 1409 aa10.99□□□□□ -0.65
PNKP-226ENST00000636840 SYTL4Q96C24 671 aaPredicted RBP10.98□□□□□ -0.65
PNKP-226ENST00000636840 ACSBG1Q96GR2 724 aa10.98□□□□□ -0.65
PNKP-226ENST00000636840 PLEKHG2Q9H7P9 1386 aa10.98□□□□□ -0.65
PNKP-226ENST00000636840 BCL9O00512 1426 aa10.98□□□□□ -0.65
PNKP-226ENST00000636840 PLSCR1O15162 318 aa10.97□□□□□ -0.65
PNKP-226ENST00000636840 ANP32CO43423 234 aa10.97□□□□□ -0.65
PNKP-226ENST00000636840 HMOX1P09601 288 aa10.97□□□□□ -0.65
PNKP-226ENST00000636840 U2AF1L5P0DN76 240 aaPredicted RBP10.97□□□□□ -0.65
PNKP-226ENST00000636840 U2AF1Q01081 240 aaKnown RBP eCLIP10.97□□□□□ -0.65
PNKP-226ENST00000636840 EN1Q05925 392 aaPredicted RBP10.97□□□□□ -0.65
PNKP-226ENST00000636840 DEFB132Q7Z7B7 95 aa10.97□□□□□ -0.65
PNKP-226ENST00000636840 PARD3Q8TEW0 1356 aa10.97□□□□□ -0.65
PNKP-226ENST00000636840 MYBBP1AQ9BQG0 1328 aaKnown RBP10.96□□□□□ -0.65
PNKP-226ENST00000636840 ZNF530Q6P9A1 599 aaPredicted RBP10.96□□□□□ -0.65
PNKP-226ENST00000636840 PRKRIP1Q9H875 184 aaPredicted RBP10.96□□□□□ -0.65
PNKP-226ENST00000636840 RGPD2P0DJD1 1756 aa10.95□□□□□ -0.66
PNKP-226ENST00000636840 MEGF6O75095 1541 aa10.95□□□□□ -0.66
PNKP-226ENST00000636840 CYP27B1O15528 508 aa10.95□□□□□ -0.66
PNKP-226ENST00000636840 FCHSD2O94868 740 aa10.95□□□□□ -0.66
PNKP-226ENST00000636840 PRIM1P49642 420 aaKnown RBP10.95□□□□□ -0.66
PNKP-226ENST00000636840 NKX1-1Q15270 411 aaPredicted RBP10.95□□□□□ -0.66
PNKP-226ENST00000636840 NBPF14Q5TI25 921 aa10.95□□□□□ -0.66
PNKP-226ENST00000636840 AEBP1Q8IUX7 1158 aa10.95□□□□□ -0.66
PNKP-226ENST00000636840 NCAPD2Q15021 1401 aa10.94□□□□□ -0.66
PNKP-226ENST00000636840 KCNQ2O43526 872 aa10.94□□□□□ -0.66
PNKP-226ENST00000636840 PHKG2P15735 406 aa10.94□□□□□ -0.66
PNKP-226ENST00000636840 GAS2L2Q8NHY3 880 aa10.94□□□□□ -0.66
PNKP-226ENST00000636840 DCAF5Q96JK2 942 aa10.94□□□□□ -0.66
PNKP-226ENST00000636840 KDRP35968 1356 aa10.93□□□□□ -0.66
PNKP-226ENST00000636840 ERVV-2B6SEH9 535 aa10.93□□□□□ -0.66
PNKP-226ENST00000636840 WDR43Q15061 677 aaKnown RBP eCLIP10.93□□□□□ -0.66
PNKP-226ENST00000636840 EZH2Q15910 746 aaKnown RBP10.93□□□□□ -0.66
PNKP-226ENST00000636840 AKAP4Q5JQC9 854 aa10.93□□□□□ -0.66
PNKP-226ENST00000636840 MPRIPQ6WCQ1 1025 aa10.93□□□□□ -0.66
PNKP-226ENST00000636840 SMARCC1Q92922 1105 aaPredicted RBP10.93□□□□□ -0.66
PNKP-226ENST00000636840 CAMKK2Q96RR4 588 aa10.93□□□□□ -0.66
PNKP-226ENST00000636840 LRRC37A3O60309 1634 aa10.93□□□□□ -0.66
PNKP-226ENST00000636840 TMOD3Q9NYL9 352 aa10.92□□□□□ -0.66
PNKP-226ENST00000636840 WNK3Q9BYP7 1800 aa10.92□□□□□ -0.66
PNKP-226ENST00000636840 EP400Q96L91 3159 aa10.92□□□□□ -0.66
PNKP-226ENST00000636840 PRKAR2BP31323 418 aa10.91□□□□□ -0.66
PNKP-226ENST00000636840 CABP4P57796 275 aa10.91□□□□□ -0.66
PNKP-226ENST00000636840 RGPD1P0DJD0 1748 aa10.91□□□□□ -0.66
PNKP-226ENST00000636840 GNAT3A8MTJ3 354 aa10.9□□□□□ -0.66
PNKP-226ENST00000636840 TXNRD1Q16881 649 aa10.9□□□□□ -0.66
PNKP-226ENST00000636840 MTHFSDQ2M296 383 aaKnown RBP10.9□□□□□ -0.66
PNKP-226ENST00000636840 SLC27A3Q5K4L6 730 aa10.9□□□□□ -0.66
PNKP-226ENST00000636840 PTF1AQ7RTS3 328 aa10.9□□□□□ -0.66
PNKP-226ENST00000636840 RTF1Q92541 710 aaKnown RBP10.9□□□□□ -0.66
PNKP-226ENST00000636840 MAPK8IP3Q9UPT6 1336 aa10.89□□□□□ -0.67
PNKP-226ENST00000636840 RSPH6AQ9H0K4 717 aa10.89□□□□□ -0.67
PNKP-226ENST00000636840 TEFQ10587 303 aa10.88□□□□□ -0.67
PNKP-226ENST00000636840 PIGBQ92521 554 aa10.88□□□□□ -0.67
PNKP-226ENST00000636840 STK32BQ9NY57 414 aa10.88□□□□□ -0.67
PNKP-226ENST00000636840 COL3A1P02461 1466 aaPredicted RBP10.87□□□□□ -0.67
PNKP-226ENST00000636840 SBF2Q86WG5 1849 aa10.87□□□□□ -0.67
PNKP-226ENST00000636840 RNMTO43148 476 aaKnown RBP10.87□□□□□ -0.67
PNKP-226ENST00000636840 HTATSF1O43719 755 aaKnown RBP10.87□□□□□ -0.67
PNKP-226ENST00000636840 NFATC2IPQ8NCF5 419 aa10.87□□□□□ -0.67
PNKP-226ENST00000636840 PROM2Q8N271 834 aa10.86□□□□□ -0.67
PNKP-226ENST00000636840 PHACTR3Q96KR7 559 aa10.86□□□□□ -0.67
PNKP-226ENST00000636840 CCNL1Q9UK58 526 aaPredicted RBP10.86□□□□□ -0.67
PNKP-226ENST00000636840 PKD1L3Q7Z443 1732 aa10.85□□□□□ -0.67
PNKP-226ENST00000636840 RBM42Q9BTD8 480 aaKnown RBP10.85□□□□□ -0.67
PNKP-226ENST00000636840 SLC52A2Q9HAB3 445 aa10.85□□□□□ -0.67
PNKP-226ENST00000636840 LGR6Q9HBX8 967 aa10.85□□□□□ -0.67
PNKP-226ENST00000636840 LMOD3Q0VAK6 560 aa10.84□□□□□ -0.67
PNKP-226ENST00000636840 R3HDM1Q15032 1099 aaKnown RBP10.84□□□□□ -0.67
PNKP-226ENST00000636840 NFE2L2Q16236 605 aa10.84□□□□□ -0.67
PNKP-226ENST00000636840 RUNDC1Q96C34 613 aa10.84□□□□□ -0.67
PNKP-226ENST00000636840 MRS2Q9HD23 443 aa10.84□□□□□ -0.67
PNKP-226ENST00000636840 ATG3Q9NT62 314 aa10.84□□□□□ -0.67
PNKP-226ENST00000636840 ASAP1Q9ULH1 1129 aa10.84□□□□□ -0.67
PNKP-226ENST00000636840 ADAMTS8Q9UP79 889 aa10.84□□□□□ -0.67
PNKP-226ENST00000636840 MAP3K5Q99683 1374 aa10.84□□□□□ -0.67
PNKP-226ENST00000636840 NHSQ6T4R5 1651 aa10.83□□□□□ -0.68
PNKP-226ENST00000636840 PALLDQ8WX93 1383 aa10.83□□□□□ -0.68
PNKP-226ENST00000636840 LOC102724428A0A0B4J2F2 783 aa10.83□□□□□ -0.68
PNKP-226ENST00000636840 ATP6V1AP38606 617 aa10.83□□□□□ -0.68
PNKP-226ENST00000636840 SIK1P57059 783 aa10.83□□□□□ -0.68
PNKP-226ENST00000636840 SLC15A2Q16348 729 aa10.83□□□□□ -0.68
PNKP-226ENST00000636840 TTC5Q8N0Z6 440 aa10.83□□□□□ -0.68
PNKP-226ENST00000636840 PLEKHF1Q96S99 279 aa10.83□□□□□ -0.68
PNKP-226ENST00000636840 TNS1Q9HBL0 1735 aaKnown RBP10.83□□□□□ -0.68
PNKP-226ENST00000636840 PSDA5PKW4 1024 aaPredicted RBP10.82□□□□□ -0.68
PNKP-226ENST00000636840 RIPK4P57078 832 aa10.82□□□□□ -0.68
PNKP-226ENST00000636840 FLAD1Q8NFF5 587 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms