RNA–Protein interactions for RNA: ENST00000636670.1

CACNA1A-229, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-229ENST00000636670 KCNH5Q8NCM2 988 aa22.37■■□□□ 1.17
CACNA1A-229ENST00000636670 ACSBG1Q96GR2 724 aa22.37■■□□□ 1.17
CACNA1A-229ENST00000636670 POLR3GLQ9BT43 218 aa22.37■■□□□ 1.17
CACNA1A-229ENST00000636670 NHSQ6T4R5 1651 aa22.36■■□□□ 1.17
CACNA1A-229ENST00000636670 CSB-PGBD3P0DP91 1061 aa22.36■■□□□ 1.17
CACNA1A-229ENST00000636670 AKT1S1Q96B36 256 aa22.36■■□□□ 1.17
CACNA1A-229ENST00000636670 LRRC4BQ9NT99 713 aa22.36■■□□□ 1.17
CACNA1A-229ENST00000636670 COL24A1Q17RW2 1714 aa22.36■■□□□ 1.17
CACNA1A-229ENST00000636670 FAM208AQ9UK61 1670 aaKnown RBP22.36■■□□□ 1.17
CACNA1A-229ENST00000636670 CCDC7Q96M83 1385 aa22.35■■□□□ 1.17
CACNA1A-229ENST00000636670 ZEB1P37275 1124 aaPredicted RBP22.34■■□□□ 1.17
CACNA1A-229ENST00000636670 PNPLA7Q6ZV29 1317 aa22.32■■□□□ 1.16
CACNA1A-229ENST00000636670 TNS2Q63HR2 1409 aa22.32■■□□□ 1.16
CACNA1A-229ENST00000636670 SLC27A3Q5K4L6 730 aa22.31■■□□□ 1.16
CACNA1A-229ENST00000636670 CARD14Q9BXL6 1004 aa22.31■■□□□ 1.16
CACNA1A-229ENST00000636670 QSER1Q2KHR3 1735 aa22.31■■□□□ 1.16
CACNA1A-229ENST00000636670 ARHGEF25Q86VW2 580 aa22.3■■□□□ 1.16
CACNA1A-229ENST00000636670 ZNF526Q8TF50 670 aaPredicted RBP22.3■■□□□ 1.16
CACNA1A-229ENST00000636670 COG3Q96JB2 828 aa22.3■■□□□ 1.16
CACNA1A-229ENST00000636670 ADCY9O60503 1353 aa22.29■■□□□ 1.16
CACNA1A-229ENST00000636670 APLP1P51693 650 aa22.29■■□□□ 1.16
CACNA1A-229ENST00000636670 TFCP2L1Q9NZI6 479 aa22.29■■□□□ 1.16
CACNA1A-229ENST00000636670 MAP2P11137 1827 aaKnown RBP22.29■■□□□ 1.16
CACNA1A-229ENST00000636670 CGNL1Q0VF96 1302 aa22.29■■□□□ 1.16
CACNA1A-229ENST00000636670 NSD2O96028 1365 aa22.28■■□□□ 1.16
CACNA1A-229ENST00000636670 WASHC2AQ641Q2 1341 aa22.28■■□□□ 1.16
CACNA1A-229ENST00000636670 BTAF1O14981 1849 aa22.27■■□□□ 1.16
CACNA1A-229ENST00000636670 FYB1O15117 783 aa22.27■■□□□ 1.16
CACNA1A-229ENST00000636670 SOX12O15370 315 aa22.26■■□□□ 1.15
CACNA1A-229ENST00000636670 PANK3Q9H999 370 aa22.25■■□□□ 1.15
CACNA1A-229ENST00000636670 RTL1A6NKG5 1358 aa22.25■■□□□ 1.15
CACNA1A-229ENST00000636670 DNAJC5GQ8N7S2 189 aa22.24■■□□□ 1.15
CACNA1A-229ENST00000636670 GGNBP2Q9H3C7 697 aa22.24■■□□□ 1.15
CACNA1A-229ENST00000636670 KIF3CO14782 793 aa22.22■■□□□ 1.15
CACNA1A-229ENST00000636670 KAT6BQ8WYB5 2073 aa22.21■■□□□ 1.15
CACNA1A-229ENST00000636670 CD2APQ9Y5K6 639 aa22.21■■□□□ 1.15
CACNA1A-229ENST00000636670 RGPD2P0DJD1 1756 aa22.2■■□□□ 1.14
CACNA1A-229ENST00000636670 IL2RBP14784 551 aa22.19■■□□□ 1.14
CACNA1A-229ENST00000636670 COL13A1Q5TAT6 717 aaPredicted RBP22.19■■□□□ 1.14
CACNA1A-229ENST00000636670 KIF24Q5T7B8 1368 aa22.19■■□□□ 1.14
CACNA1A-229ENST00000636670 CAPN15O75808 1086 aa22.18■■□□□ 1.14
CACNA1A-229ENST00000636670 MAP3K19Q56UN5 1328 aa22.17■■□□□ 1.14
CACNA1A-229ENST00000636670 KNSTRNQ9Y448 316 aa22.17■■□□□ 1.14
CACNA1A-229ENST00000636670 ERBB3P21860 1342 aa22.16■■□□□ 1.14
CACNA1A-229ENST00000636670 TUBGCP6Q96RT7 1819 aa22.16■■□□□ 1.14
CACNA1A-229ENST00000636670 MSH5O43196 834 aa22.16■■□□□ 1.14
CACNA1A-229ENST00000636670 SMG6Q86US8 1419 aaKnown RBP22.15■■□□□ 1.14
CACNA1A-229ENST00000636670 KCNQ4P56696 695 aa22.15■■□□□ 1.14
CACNA1A-229ENST00000636670 NLRP2Q9NX02 1062 aa22.15■■□□□ 1.14
CACNA1A-229ENST00000636670 FLT4P35916 1363 aa22.14■■□□□ 1.14
CACNA1A-229ENST00000636670 NPC1L1Q9UHC9 1359 aa22.14■■□□□ 1.14
CACNA1A-229ENST00000636670 TOMM70O94826 608 aa22.14■■□□□ 1.13
CACNA1A-229ENST00000636670 PRELPP51888 382 aa22.14■■□□□ 1.13
CACNA1A-229ENST00000636670 COL23A1Q86Y22 540 aaPredicted RBP22.14■■□□□ 1.13
CACNA1A-229ENST00000636670 AMER1Q5JTC6 1135 aaPredicted RBP22.12■■□□□ 1.13
CACNA1A-229ENST00000636670 IP6K1Q92551 441 aa22.12■■□□□ 1.13
CACNA1A-229ENST00000636670 HOXC9P31274 260 aa22.11■■□□□ 1.13
CACNA1A-229ENST00000636670 RRS1Q15050 365 aaKnown RBP22.11■■□□□ 1.13
CACNA1A-229ENST00000636670 TNS4Q8IZW8 715 aa22.11■■□□□ 1.13
CACNA1A-229ENST00000636670 PER1O15534 1290 aaPredicted RBP22.1■■□□□ 1.13
CACNA1A-229ENST00000636670 AMPHP49418 695 aa22.1■■□□□ 1.13
CACNA1A-229ENST00000636670 MSL1Q68DK7 614 aa22.1■■□□□ 1.13
CACNA1A-229ENST00000636670 INSRP06213 1382 aa22.09■■□□□ 1.13
CACNA1A-229ENST00000636670 FBLN1P23142 703 aa22.08■■□□□ 1.13
CACNA1A-229ENST00000636670 ANKRD24Q8TF21 1146 aa22.08■■□□□ 1.13
CACNA1A-229ENST00000636670 SYTL4Q96C24 671 aaPredicted RBP22.08■■□□□ 1.13
CACNA1A-229ENST00000636670 CCNL1Q9UK58 526 aaPredicted RBP22.08■■□□□ 1.13
CACNA1A-229ENST00000636670 JMYQ8N9B5 988 aa22.07■■□□□ 1.12
CACNA1A-229ENST00000636670 DDX54Q8TDD1 881 aaKnown RBP22.07■■□□□ 1.12
CACNA1A-229ENST00000636670 KLRG1Q96E93 195 aa22.07■■□□□ 1.12
CACNA1A-229ENST00000636670 PRIM1P49642 420 aaKnown RBP22.06■■□□□ 1.12
CACNA1A-229ENST00000636670 LY75O60449 1722 aa22.06■■□□□ 1.12
CACNA1A-229ENST00000636670 MORC1Q86VD1 984 aa22.05■■□□□ 1.12
CACNA1A-229ENST00000636670 EMILIN1Q9Y6C2 1016 aa22.05■■□□□ 1.12
CACNA1A-229ENST00000636670 IGSF1Q8N6C5 1336 aa22.05■■□□□ 1.12
CACNA1A-229ENST00000636670 FLAD1Q8NFF5 587 aa22.04■■□□□ 1.12
CACNA1A-229ENST00000636670 HMGB2P26583 209 aaKnown RBP22.02■■□□□ 1.12
CACNA1A-229ENST00000636670 POLKQ9UBT6 870 aa22.02■■□□□ 1.12
CACNA1A-229ENST00000636670 NCAPD2Q15021 1401 aa22.02■■□□□ 1.12
CACNA1A-229ENST00000636670 PKD1L3Q7Z443 1732 aa22.01■■□□□ 1.11
CACNA1A-229ENST00000636670 WDR90Q96KV7 1748 aa22.01■■□□□ 1.11
CACNA1A-229ENST00000636670 TNNT2P45379 298 aaPredicted RBP22■■□□□ 1.11
CACNA1A-229ENST00000636670 WWC3Q9ULE0 1092 aa22■■□□□ 1.11
CACNA1A-229ENST00000636670 HSP90AB2PQ58FF8 381 aa21.99■■□□□ 1.11
CACNA1A-229ENST00000636670 CC2D1BQ5T0F9 858 aaKnown RBP21.98■■□□□ 1.11
CACNA1A-229ENST00000636670 RBM46Q8TBY0 533 aaKnown RBP21.98■■□□□ 1.11
CACNA1A-229ENST00000636670 LTV1Q96GA3 475 aaPredicted RBP21.98■■□□□ 1.11
CACNA1A-229ENST00000636670 PPM1GO15355 546 aaPredicted RBP21.96■■□□□ 1.11
CACNA1A-229ENST00000636670 HTRA3P83110 453 aa21.96■■□□□ 1.11
CACNA1A-229ENST00000636670 MEGF6O75095 1541 aa21.96■■□□□ 1.11
CACNA1A-229ENST00000636670 NMRK2Q9NPI5 230 aa21.94■■□□□ 1.1
CACNA1A-229ENST00000636670 DOT1LQ8TEK3 1739 aa21.94■■□□□ 1.1
CACNA1A-229ENST00000636670 SLC34A2O95436 690 aa21.93■■□□□ 1.1
CACNA1A-229ENST00000636670 COL3A1P02461 1466 aaPredicted RBP21.93■■□□□ 1.1
CACNA1A-229ENST00000636670 CICQ96RK0 1608 aaPredicted RBP21.93■■□□□ 1.1
CACNA1A-229ENST00000636670 FSTL1Q12841 308 aa21.92■■□□□ 1.1
CACNA1A-229ENST00000636670 C16orf71Q8IYS4 520 aaPredicted RBP21.92■■□□□ 1.1
CACNA1A-229ENST00000636670 PLEKHG2Q9H7P9 1386 aa21.91■■□□□ 1.1
CACNA1A-229ENST00000636670 NBPF6Q5VWK0 638 aa21.9■■□□□ 1.1
CACNA1A-229ENST00000636670 NBPF4Q96M43 638 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms