RNA–Protein interactions for RNA: ENST00000636389.1

CACNA1A-225, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-225ENST00000636389 TRMT1LQ7Z2T5 733 aaKnown RBP20.5■□□□□ 0.87
CACNA1A-225ENST00000636389 CRACR2BQ8N4Y2 399 aaPredicted RBP20.5■□□□□ 0.87
CACNA1A-225ENST00000636389 MRE11P49959 708 aa20.5■□□□□ 0.87
CACNA1A-225ENST00000636389 ZSCAN25Q6NSZ9 544 aa20.5■□□□□ 0.87
CACNA1A-225ENST00000636389 LMAN1P49257 510 aa20.5■□□□□ 0.87
CACNA1A-225ENST00000636389 RGS22Q8NE09 1264 aa20.49■□□□□ 0.87
CACNA1A-225ENST00000636389 CDKL5O76039 1030 aa20.49■□□□□ 0.87
CACNA1A-225ENST00000636389 MBD3O95983 291 aa20.49■□□□□ 0.87
CACNA1A-225ENST00000636389 CRACR2AQ9BSW2 395 aa20.49■□□□□ 0.87
CACNA1A-225ENST00000636389 GCOM1H8Y6P7 765 aaPredicted RBP20.48■□□□□ 0.87
CACNA1A-225ENST00000636389 MYZAPP0CAP1 466 aa20.48■□□□□ 0.87
CACNA1A-225ENST00000636389 SPA17Q15506 151 aa20.48■□□□□ 0.87
CACNA1A-225ENST00000636389 PLEKHO1Q53GL0 409 aaPredicted RBP20.48■□□□□ 0.87
CACNA1A-225ENST00000636389 CACNA2D4Q7Z3S7 1137 aa20.48■□□□□ 0.87
CACNA1A-225ENST00000636389 MAP3K9P80192 1104 aa20.48■□□□□ 0.87
CACNA1A-225ENST00000636389 GNAI2P04899 355 aa20.48■□□□□ 0.87
CACNA1A-225ENST00000636389 BMS1Q14692 1282 aaKnown RBP20.48■□□□□ 0.87
CACNA1A-225ENST00000636389 ARHGAP29Q52LW3 1261 aa20.47■□□□□ 0.87
CACNA1A-225ENST00000636389 TIGD1Q96MW7 591 aa20.47■□□□□ 0.87
CACNA1A-225ENST00000636389 TSNARE1Q96NA8 513 aa20.47■□□□□ 0.87
CACNA1A-225ENST00000636389 TATP17735 454 aaPredicted RBP20.46■□□□□ 0.87
CACNA1A-225ENST00000636389 GNAI3P08754 354 aa20.46■□□□□ 0.87
CACNA1A-225ENST00000636389 MCM2P49736 904 aa20.46■□□□□ 0.87
CACNA1A-225ENST00000636389 TSG101Q99816 390 aa20.46■□□□□ 0.87
CACNA1A-225ENST00000636389 SHTN1A0MZ66 631 aa20.46■□□□□ 0.87
CACNA1A-225ENST00000636389 LARP1BQ659C4 914 aaKnown RBP20.46■□□□□ 0.87
CACNA1A-225ENST00000636389 GRM1Q13255 1194 aa20.46■□□□□ 0.87
CACNA1A-225ENST00000636389 ABCF2Q9UG63 623 aa20.46■□□□□ 0.87
CACNA1A-225ENST00000636389 APBB1IPQ7Z5R6 666 aaPredicted RBP20.45■□□□□ 0.87
CACNA1A-225ENST00000636389 LUZP1Q86V48 1076 aa20.45■□□□□ 0.87
CACNA1A-225ENST00000636389 ANKIB1Q9P2G1 1089 aa20.45■□□□□ 0.87
CACNA1A-225ENST00000636389 PUF60Q9UHX1 559 aaKnown RBP20.45■□□□□ 0.87
CACNA1A-225ENST00000636389 POLR3DP05423 398 aaPredicted RBP20.45■□□□□ 0.86
CACNA1A-225ENST00000636389 AEBP1Q8IUX7 1158 aa20.45■□□□□ 0.86
CACNA1A-225ENST00000636389 CABP2Q9NPB3 220 aa20.45■□□□□ 0.86
CACNA1A-225ENST00000636389 RBM25P49756 843 aaKnown RBP20.45■□□□□ 0.86
CACNA1A-225ENST00000636389 CCDC85AQ96PX6 553 aaPredicted RBP20.45■□□□□ 0.86
CACNA1A-225ENST00000636389 USP47Q96K76 1375 aa20.45■□□□□ 0.86
CACNA1A-225ENST00000636389 CASQ1P31415 396 aa20.45■□□□□ 0.86
CACNA1A-225ENST00000636389 ZMYND15Q9H091 742 aa20.45■□□□□ 0.86
CACNA1A-225ENST00000636389 RAB3IL1Q8TBN0 382 aa20.44■□□□□ 0.86
CACNA1A-225ENST00000636389 KANK4Q5T7N3 995 aaPredicted RBP20.44■□□□□ 0.86
CACNA1A-225ENST00000636389 KLHL10Q6JEL2 608 aa20.44■□□□□ 0.86
CACNA1A-225ENST00000636389 KRT85P78386 507 aa20.44■□□□□ 0.86
CACNA1A-225ENST00000636389 CEP131Q9UPN4 1083 aa20.44■□□□□ 0.86
CACNA1A-225ENST00000636389 IMMTQ16891 758 aaKnown RBP20.43■□□□□ 0.86
CACNA1A-225ENST00000636389 SPATA32Q96LK8 384 aa20.43■□□□□ 0.86
CACNA1A-225ENST00000636389 CFAP100Q494V2 611 aa20.43■□□□□ 0.86
CACNA1A-225ENST00000636389 RNF187Q5TA31 235 aaPredicted RBP20.43■□□□□ 0.86
CACNA1A-225ENST00000636389 VPS36Q86VN1 386 aa20.43■□□□□ 0.86
CACNA1A-225ENST00000636389 MKNK2Q9HBH9 465 aa20.43■□□□□ 0.86
CACNA1A-225ENST00000636389 GGNBP2Q9H3C7 697 aa20.43■□□□□ 0.86
CACNA1A-225ENST00000636389 VTI1AQ96AJ9 217 aa20.42■□□□□ 0.86
CACNA1A-225ENST00000636389 UPF3BQ9BZI7 483 aaKnown RBP20.42■□□□□ 0.86
CACNA1A-225ENST00000636389 LRSAM1Q6UWE0 723 aa20.42■□□□□ 0.86
CACNA1A-225ENST00000636389 CCDC96Q2M329 555 aa20.42■□□□□ 0.86
CACNA1A-225ENST00000636389 CUL5Q93034 780 aa20.42■□□□□ 0.86
CACNA1A-225ENST00000636389 FKBP15Q5T1M5 1219 aa20.41■□□□□ 0.86
CACNA1A-225ENST00000636389 GAS2L2Q8NHY3 880 aa20.41■□□□□ 0.86
CACNA1A-225ENST00000636389 PPP1R14CQ8TAE6 165 aa20.41■□□□□ 0.86
CACNA1A-225ENST00000636389 UQCRHLA0A096LP55 91 aa20.41■□□□□ 0.86
CACNA1A-225ENST00000636389 IDH1O75874 414 aaKnown RBP20.41■□□□□ 0.86
CACNA1A-225ENST00000636389 UQCRHP07919 91 aa20.41■□□□□ 0.86
CACNA1A-225ENST00000636389 IGHMBP2P38935 993 aaKnown RBP20.41■□□□□ 0.86
CACNA1A-225ENST00000636389 MINDY4BA8MYZ0 360 aa20.41■□□□□ 0.86
CACNA1A-225ENST00000636389 TMX1Q9H3N1 280 aa20.41■□□□□ 0.86
CACNA1A-225ENST00000636389 MTHFSP49914 203 aa20.41■□□□□ 0.86
CACNA1A-225ENST00000636389 OTUD6BQ8N6M0 293 aa20.4■□□□□ 0.86
CACNA1A-225ENST00000636389 ZNF287Q9HBT7 754 aa20.4■□□□□ 0.86
CACNA1A-225ENST00000636389 FILIP1Q7Z7B0 1213 aa20.4■□□□□ 0.86
CACNA1A-225ENST00000636389 SMTNL1A8MU46 457 aa20.4■□□□□ 0.86
CACNA1A-225ENST00000636389 AACSQ86V21 672 aa20.4■□□□□ 0.86
CACNA1A-225ENST00000636389 FERMT1Q9BQL6 677 aa20.4■□□□□ 0.86
CACNA1A-225ENST00000636389 ZBED9Q6R2W3 1325 aa20.39■□□□□ 0.86
CACNA1A-225ENST00000636389 PRPF4BQ13523 1007 aaKnown RBP20.39■□□□□ 0.86
CACNA1A-225ENST00000636389 CWC27Q6UX04 472 aaKnown RBP20.39■□□□□ 0.85
CACNA1A-225ENST00000636389 SPTY2D1Q68D10 685 aaPredicted RBP20.39■□□□□ 0.85
CACNA1A-225ENST00000636389 SH3BP5O60239 455 aa20.39■□□□□ 0.85
CACNA1A-225ENST00000636389 MAP9Q49MG5 647 aa20.39■□□□□ 0.85
CACNA1A-225ENST00000636389 SPECC1Q5M775 1068 aa20.39■□□□□ 0.85
CACNA1A-225ENST00000636389 WASF1Q92558 559 aa20.38■□□□□ 0.85
CACNA1A-225ENST00000636389 ZNF219Q9P2Y4 722 aaPredicted RBP20.38■□□□□ 0.85
CACNA1A-225ENST00000636389 ZPR1O75312 459 aa20.38■□□□□ 0.85
CACNA1A-225ENST00000636389 DHX57Q6P158 1386 aaKnown RBP20.38■□□□□ 0.85
CACNA1A-225ENST00000636389 AIDAQ96BJ3 306 aa20.38■□□□□ 0.85
CACNA1A-225ENST00000636389 TAOK3Q9H2K8 898 aa20.38■□□□□ 0.85
CACNA1A-225ENST00000636389 SOGA1O94964 1423 aa20.37■□□□□ 0.85
CACNA1A-225ENST00000636389 CAMK4Q16566 473 aa20.37■□□□□ 0.85
CACNA1A-225ENST00000636389 HDGFL1Q5TGJ6 251 aa20.37■□□□□ 0.85
CACNA1A-225ENST00000636389 ABCC8Q09428 1581 aa20.37■□□□□ 0.85
CACNA1A-225ENST00000636389 FSD2A1L4K1 749 aa20.37■□□□□ 0.85
CACNA1A-225ENST00000636389 SAMM50Q9Y512 469 aa20.37■□□□□ 0.85
CACNA1A-225ENST00000636389 CCDC175P0C221 793 aa20.36■□□□□ 0.85
CACNA1A-225ENST00000636389 IKBKGQ9Y6K9 419 aa20.36■□□□□ 0.85
CACNA1A-225ENST00000636389 PSMC4P43686 418 aa20.36■□□□□ 0.85
CACNA1A-225ENST00000636389 BLOC1S2Q6QNY1 142 aa20.35■□□□□ 0.85
CACNA1A-225ENST00000636389 RAD54L2Q9Y4B4 1467 aa20.35■□□□□ 0.85
CACNA1A-225ENST00000636389 WDR33Q9C0J8 1336 aaKnown RBP20.35■□□□□ 0.85
CACNA1A-225ENST00000636389 DDX11Q96FC9 970 aa20.35■□□□□ 0.85
CACNA1A-225ENST00000636389 SLC4A2P04920 1241 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 145.5 ms