RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 UTRNP46939 3433 aa25.43■■□□□ 1.66
CLN6-214ENST00000636314 ZNF827Q17R98 1081 aa25.43■■□□□ 1.66
CLN6-214ENST00000636314 QSER1Q2KHR3 1735 aa25.43■■□□□ 1.66
CLN6-214ENST00000636314 FBLN1P23142 703 aa25.42■■□□□ 1.66
CLN6-214ENST00000636314 HOXC9P31274 260 aa25.42■■□□□ 1.66
CLN6-214ENST00000636314 ZNF784Q8NCA9 323 aaPredicted RBP25.42■■□□□ 1.66
CLN6-214ENST00000636314 LTV1Q96GA3 475 aaPredicted RBP25.42■■□□□ 1.66
CLN6-214ENST00000636314 RRS1Q15050 365 aaKnown RBP25.4■■□□□ 1.66
CLN6-214ENST00000636314 DDX54Q8TDD1 881 aaKnown RBP25.4■■□□□ 1.66
CLN6-214ENST00000636314 LRRC4BQ9NT99 713 aa25.4■■□□□ 1.66
CLN6-214ENST00000636314 RGPD2P0DJD1 1756 aa25.4■■□□□ 1.66
CLN6-214ENST00000636314 DOT1LQ8TEK3 1739 aa25.4■■□□□ 1.66
CLN6-214ENST00000636314 TUBGCP6Q96RT7 1819 aa25.4■■□□□ 1.66
CLN6-214ENST00000636314 CGNL1Q0VF96 1302 aa25.37■■□□□ 1.65
CLN6-214ENST00000636314 ANKRD26Q9UPS8 1709 aa25.37■■□□□ 1.65
CLN6-214ENST00000636314 SMG6Q86US8 1419 aaKnown RBP25.36■■□□□ 1.65
CLN6-214ENST00000636314 MAP3K5Q99683 1374 aa25.35■■□□□ 1.65
CLN6-214ENST00000636314 KLHL34Q8N239 644 aa25.35■■□□□ 1.65
CLN6-214ENST00000636314 SYTL4Q96C24 671 aaPredicted RBP25.35■■□□□ 1.65
CLN6-214ENST00000636314 SHANK3Q9BYB0 1731 aa25.34■■□□□ 1.65
CLN6-214ENST00000636314 SLC27A3Q5K4L6 730 aa25.34■■□□□ 1.65
CLN6-214ENST00000636314 AKT1S1Q96B36 256 aa25.34■■□□□ 1.65
CLN6-214ENST00000636314 LY75O60449 1722 aa25.34■■□□□ 1.65
CLN6-214ENST00000636314 FLT4P35916 1363 aa25.33■■□□□ 1.65
CLN6-214ENST00000636314 KIF24Q5T7B8 1368 aa25.33■■□□□ 1.65
CLN6-214ENST00000636314 COL24A1Q17RW2 1714 aa25.33■■□□□ 1.65
CLN6-214ENST00000636314 GPR162Q16538 588 aa25.32■■□□□ 1.64
CLN6-214ENST00000636314 POLD1P28340 1107 aa25.31■■□□□ 1.64
CLN6-214ENST00000636314 SLC16A10Q8TF71 515 aa25.31■■□□□ 1.64
CLN6-214ENST00000636314 INSRP06213 1382 aa25.31■■□□□ 1.64
CLN6-214ENST00000636314 KCNQ4P56696 695 aa25.3■■□□□ 1.64
CLN6-214ENST00000636314 TFCP2L1Q9NZI6 479 aa25.3■■□□□ 1.64
CLN6-214ENST00000636314 MAP2P11137 1827 aaKnown RBP25.29■■□□□ 1.64
CLN6-214ENST00000636314 PRIM1P49642 420 aaKnown RBP25.29■■□□□ 1.64
CLN6-214ENST00000636314 PANK3Q9H999 370 aa25.29■■□□□ 1.64
CLN6-214ENST00000636314 PNPLA7Q6ZV29 1317 aa25.29■■□□□ 1.64
CLN6-214ENST00000636314 EMILIN1Q9Y6C2 1016 aa25.28■■□□□ 1.64
CLN6-214ENST00000636314 HSP90AB2PQ58FF8 381 aa25.27■■□□□ 1.64
CLN6-214ENST00000636314 PELP1Q8IZL8 1130 aaKnown RBP25.27■■□□□ 1.64
CLN6-214ENST00000636314 ZCRB1Q8TBF4 217 aaKnown RBP25.26■■□□□ 1.63
CLN6-214ENST00000636314 MEGF6O75095 1541 aa25.26■■□□□ 1.63
CLN6-214ENST00000636314 NSD2O96028 1365 aa25.25■■□□□ 1.63
CLN6-214ENST00000636314 PPM1GO15355 546 aaPredicted RBP25.24■■□□□ 1.63
CLN6-214ENST00000636314 NBPF6Q5VWK0 638 aa25.24■■□□□ 1.63
CLN6-214ENST00000636314 NBPF4Q96M43 638 aa25.24■■□□□ 1.63
CLN6-214ENST00000636314 KIF7Q2M1P5 1343 aa25.23■■□□□ 1.63
CLN6-214ENST00000636314 SENP3-EIF4A1A0A087X0R7 540 aa25.23■■□□□ 1.63
CLN6-214ENST00000636314 USHBP1Q8N6Y0 703 aa25.23■■□□□ 1.63
CLN6-214ENST00000636314 CCNL1Q9UK58 526 aaPredicted RBP25.22■■□□□ 1.63
CLN6-214ENST00000636314 MSH5O43196 834 aa25.21■■□□□ 1.63
CLN6-214ENST00000636314 C1QTNF8P60827 252 aa25.21■■□□□ 1.63
CLN6-214ENST00000636314 GOLGB1Q14789 3259 aaKnown RBP25.2■■□□□ 1.63
CLN6-214ENST00000636314 TNNT2P45379 298 aaPredicted RBP25.2■■□□□ 1.62
CLN6-214ENST00000636314 NLGN2Q8NFZ4 835 aa25.2■■□□□ 1.62
CLN6-214ENST00000636314 RAPGEF4Q8WZA2 1011 aa25.2■■□□□ 1.62
CLN6-214ENST00000636314 C5P01031 1676 aa25.19■■□□□ 1.62
CLN6-214ENST00000636314 WASHC2AQ641Q2 1341 aa25.18■■□□□ 1.62
CLN6-214ENST00000636314 POLKQ9UBT6 870 aa25.18■■□□□ 1.62
CLN6-214ENST00000636314 KNSTRNQ9Y448 316 aa25.17■■□□□ 1.62
CLN6-214ENST00000636314 TATP17735 454 aaPredicted RBP25.16■■□□□ 1.62
CLN6-214ENST00000636314 TAF1LQ8IZX4 1826 aa25.16■■□□□ 1.62
CLN6-214ENST00000636314 NCAPD2Q15021 1401 aa25.14■■□□□ 1.62
CLN6-214ENST00000636314 COL23A1Q86Y22 540 aaPredicted RBP25.14■■□□□ 1.62
CLN6-214ENST00000636314 PKD1L3Q7Z443 1732 aa25.13■■□□□ 1.61
CLN6-214ENST00000636314 GIGYF1O75420 1035 aaPredicted RBP25.13■■□□□ 1.61
CLN6-214ENST00000636314 MORC1Q86VD1 984 aa25.13■■□□□ 1.61
CLN6-214ENST00000636314 ITGB4P16144 1822 aa25.12■■□□□ 1.61
CLN6-214ENST00000636314 MSL1Q68DK7 614 aa25.12■■□□□ 1.61
CLN6-214ENST00000636314 PCDH11XQ9BZA7 1347 aa25.11■■□□□ 1.61
CLN6-214ENST00000636314 PCDH11YQ9BZA8 1340 aa25.11■■□□□ 1.61
CLN6-214ENST00000636314 TOGARAM1Q9Y4F4 1720 aa25.09■■□□□ 1.61
CLN6-214ENST00000636314 GRIN3BO60391 1043 aa25.08■■□□□ 1.61
CLN6-214ENST00000636314 YBX3P16989 372 aaKnown RBP eCLIP25.08■■□□□ 1.611e-7■■□□□ 13.8
CLN6-214ENST00000636314 EYA1Q99502 592 aa25.08■■□□□ 1.61
CLN6-214ENST00000636314 EIF4A2Q14240 407 aaKnown RBP25.07■■□□□ 1.6
CLN6-214ENST00000636314 AMER1Q5JTC6 1135 aaPredicted RBP25.07■■□□□ 1.6
CLN6-214ENST00000636314 PALLDQ8WX93 1383 aa25.06■■□□□ 1.6
CLN6-214ENST00000636314 MPRIPQ6WCQ1 1025 aa25.06■■□□□ 1.6
CLN6-214ENST00000636314 C4BP0C0L5 1744 aa25.06■■□□□ 1.6
CLN6-214ENST00000636314 HMGB2P26583 209 aaKnown RBP25.03■■□□□ 1.6
CLN6-214ENST00000636314 FLAD1Q8NFF5 587 aa25.03■■□□□ 1.6
CLN6-214ENST00000636314 UBR3Q6ZT12 1888 aa25.02■■□□□ 1.6
CLN6-214ENST00000636314 SPG7Q9UQ90 795 aa25.01■■□□□ 1.59
CLN6-214ENST00000636314 IGSF1Q8N6C5 1336 aa25.01■■□□□ 1.59
CLN6-214ENST00000636314 CYP27B1O15528 508 aa25■■□□□ 1.59
CLN6-214ENST00000636314 PER1O15534 1290 aaPredicted RBP25■■□□□ 1.59
CLN6-214ENST00000636314 AK7Q96M32 723 aa25■■□□□ 1.59
CLN6-214ENST00000636314 SMARCC1Q92922 1105 aaPredicted RBP24.99■■□□□ 1.59
CLN6-214ENST00000636314 CD2APQ9Y5K6 639 aa24.99■■□□□ 1.59
CLN6-214ENST00000636314 PLEKHG2Q9H7P9 1386 aa24.98■■□□□ 1.59
CLN6-214ENST00000636314 CC2D1BQ5T0F9 858 aaKnown RBP24.98■■□□□ 1.59
CLN6-214ENST00000636314 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.97■■□□□ 1.59
CLN6-214ENST00000636314 ATP10DQ9P241 1426 aa24.96■■□□□ 1.59
CLN6-214ENST00000636314 PHF14O94880 888 aa24.96■■□□□ 1.59
CLN6-214ENST00000636314 NPC1L1Q9UHC9 1359 aa24.94■■□□□ 1.58
CLN6-214ENST00000636314 SMIM5Q71RC9 77 aa24.93■■□□□ 1.58
CLN6-214ENST00000636314 AMIGO3Q86WK7 504 aa24.93■■□□□ 1.58
CLN6-214ENST00000636314 PIGBQ92521 554 aa24.93■■□□□ 1.58
CLN6-214ENST00000636314 CEP350Q5VT06 3117 aa24.92■■□□□ 1.58
CLN6-214ENST00000636314 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms