RNA–Protein interactions for RNA: ENST00000636168.1

CHRNA1-208, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 5 BASIC

Gene CHRNA1, Length 1,862 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-208ENST00000636168 DAXXQ9UER7 740 aaPredicted RBP17.17■□□□□ 0.34
CHRNA1-208ENST00000636168 NPC1L1Q9UHC9 1359 aa17.16■□□□□ 0.34
CHRNA1-208ENST00000636168 TNS1Q9HBL0 1735 aaKnown RBP17.15■□□□□ 0.34
CHRNA1-208ENST00000636168 BAG6P46379 1132 aa17.15■□□□□ 0.34
CHRNA1-208ENST00000636168 MEGF6O75095 1541 aa17.15■□□□□ 0.34
CHRNA1-208ENST00000636168 NEFLP07196 543 aa17.14■□□□□ 0.33
CHRNA1-208ENST00000636168 EIF4A2Q14240 407 aaKnown RBP17.14■□□□□ 0.33
CHRNA1-208ENST00000636168 SBF2Q86WG5 1849 aa17.14■□□□□ 0.33
CHRNA1-208ENST00000636168 RAPGEF4Q8WZA2 1011 aa17.14■□□□□ 0.33
CHRNA1-208ENST00000636168 EYA1Q99502 592 aa17.14■□□□□ 0.33
CHRNA1-208ENST00000636168 BCL9O00512 1426 aa17.13■□□□□ 0.33
CHRNA1-208ENST00000636168 APBA3O96018 575 aa17.12■□□□□ 0.33
CHRNA1-208ENST00000636168 TATP17735 454 aaPredicted RBP17.12■□□□□ 0.33
CHRNA1-208ENST00000636168 EN1Q05925 392 aaPredicted RBP17.12■□□□□ 0.33
CHRNA1-208ENST00000636168 ZCRB1Q8TBF4 217 aaKnown RBP17.12■□□□□ 0.33
CHRNA1-208ENST00000636168 DDX54Q8TDD1 881 aaKnown RBP17.12■□□□□ 0.33
CHRNA1-208ENST00000636168 NCAPD2Q15021 1401 aa17.11■□□□□ 0.33
CHRNA1-208ENST00000636168 MTHFSP49914 203 aa17.11■□□□□ 0.33
CHRNA1-208ENST00000636168 KAT6BQ8WYB5 2073 aa17.1■□□□□ 0.33
CHRNA1-208ENST00000636168 SHANK3Q9BYB0 1731 aa17.09■□□□□ 0.33
CHRNA1-208ENST00000636168 PTF1AQ7RTS3 328 aa17.09■□□□□ 0.33
CHRNA1-208ENST00000636168 BCL11BQ9C0K0 894 aaPredicted RBP17.09■□□□□ 0.33
CHRNA1-208ENST00000636168 IGSF1Q8N6C5 1336 aa17.08■□□□□ 0.32
CHRNA1-208ENST00000636168 ACSBG1Q96GR2 724 aa17.07■□□□□ 0.32
CHRNA1-208ENST00000636168 KCNQ2O43526 872 aa17.07■□□□□ 0.32
CHRNA1-208ENST00000636168 EZH2Q15910 746 aaKnown RBP17.07■□□□□ 0.32
CHRNA1-208ENST00000636168 CAMKK2Q96RR4 588 aa17.07■□□□□ 0.32
CHRNA1-208ENST00000636168 IL13P35225 146 aa17.05■□□□□ 0.32
CHRNA1-208ENST00000636168 PCDH11XQ9BZA7 1347 aa17.05■□□□□ 0.32
CHRNA1-208ENST00000636168 PCDH11YQ9BZA8 1340 aa17.05■□□□□ 0.32
CHRNA1-208ENST00000636168 NHSQ6T4R5 1651 aa17.05■□□□□ 0.32
CHRNA1-208ENST00000636168 DDX10Q13206 875 aaKnown RBP17.05■□□□□ 0.32
CHRNA1-208ENST00000636168 PKD1L3Q7Z443 1732 aa17.04■□□□□ 0.32
CHRNA1-208ENST00000636168 ERICH6BQ5W0A0 696 aa17.04■□□□□ 0.32
CHRNA1-208ENST00000636168 PARD3Q8TEW0 1356 aa17.04■□□□□ 0.32
CHRNA1-208ENST00000636168 PLSCR1O15162 318 aa17.03■□□□□ 0.32
CHRNA1-208ENST00000636168 SPG7Q9UQ90 795 aa17.03■□□□□ 0.32
CHRNA1-208ENST00000636168 CYP27B1O15528 508 aa17.02■□□□□ 0.32
CHRNA1-208ENST00000636168 SULT6B1Q6IMI4 303 aa17.02■□□□□ 0.32
CHRNA1-208ENST00000636168 AEBP1Q8IUX7 1158 aa17.02■□□□□ 0.32
CHRNA1-208ENST00000636168 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.02■□□□□ 0.32
CHRNA1-208ENST00000636168 DIAPH1O60610 1272 aaKnown RBP17.01■□□□□ 0.31
CHRNA1-208ENST00000636168 DOT1LQ8TEK3 1739 aa17.01■□□□□ 0.31
CHRNA1-208ENST00000636168 RGPD3A6NKT7 1758 aaPredicted RBP17.01■□□□□ 0.31
CHRNA1-208ENST00000636168 RGPD4Q7Z3J3 1758 aa17.01■□□□□ 0.31
CHRNA1-208ENST00000636168 PPP2R1AP30153 589 aa17.01■□□□□ 0.31
CHRNA1-208ENST00000636168 SYTL4Q96C24 671 aaPredicted RBP17.01■□□□□ 0.31
CHRNA1-208ENST00000636168 RREB1Q92766 1687 aa17■□□□□ 0.31
CHRNA1-208ENST00000636168 BTAF1O14981 1849 aa17■□□□□ 0.31
CHRNA1-208ENST00000636168 PRIM1P49642 420 aaKnown RBP17■□□□□ 0.31
CHRNA1-208ENST00000636168 PLEKHG2Q9H7P9 1386 aa17■□□□□ 0.31
CHRNA1-208ENST00000636168 COL3A1P02461 1466 aaPredicted RBP16.99■□□□□ 0.31
CHRNA1-208ENST00000636168 KDRP35968 1356 aa16.99■□□□□ 0.31
CHRNA1-208ENST00000636168 PRKCSHP14314 528 aaPredicted RBP16.99■□□□□ 0.31
CHRNA1-208ENST00000636168 NUP188Q5SRE5 1749 aa16.98■□□□□ 0.31
CHRNA1-208ENST00000636168 SRCAPQ6ZRS2 3230 aa16.97■□□□□ 0.31
CHRNA1-208ENST00000636168 HMOX1P09601 288 aa16.97■□□□□ 0.31
CHRNA1-208ENST00000636168 CFAP53Q96M91 514 aa16.97■□□□□ 0.31
CHRNA1-208ENST00000636168 PHKG2P15735 406 aa16.97■□□□□ 0.31
CHRNA1-208ENST00000636168 PLEKHO1Q53GL0 409 aaPredicted RBP16.97■□□□□ 0.31
CHRNA1-208ENST00000636168 IFNL2Q8IZJ0 200 aa16.97■□□□□ 0.31
CHRNA1-208ENST00000636168 PROM2Q8N271 834 aa16.97■□□□□ 0.31
CHRNA1-208ENST00000636168 NKX1-1Q15270 411 aaPredicted RBP16.96■□□□□ 0.31
CHRNA1-208ENST00000636168 AMOTQ4VCS5 1084 aa16.96■□□□□ 0.31
CHRNA1-208ENST00000636168 U2SURPO15042 1029 aaKnown RBP16.95■□□□□ 0.3
CHRNA1-208ENST00000636168 TXNRD1Q16881 649 aa16.95■□□□□ 0.3
CHRNA1-208ENST00000636168 TOGARAM1Q9Y4F4 1720 aa16.95■□□□□ 0.3
CHRNA1-208ENST00000636168 PSDA5PKW4 1024 aaPredicted RBP16.94■□□□□ 0.3
CHRNA1-208ENST00000636168 ZNF530Q6P9A1 599 aaPredicted RBP16.94■□□□□ 0.3
CHRNA1-208ENST00000636168 NBPF14Q5TI25 921 aa16.93■□□□□ 0.3
CHRNA1-208ENST00000636168 MPRIPQ6WCQ1 1025 aa16.93■□□□□ 0.3
CHRNA1-208ENST00000636168 ITGB4P16144 1822 aa16.93■□□□□ 0.3
CHRNA1-208ENST00000636168 ANP32CO43423 234 aa16.93■□□□□ 0.3
CHRNA1-208ENST00000636168 R3HDM1Q15032 1099 aaKnown RBP16.93■□□□□ 0.3
CHRNA1-208ENST00000636168 RALBP1Q15311 655 aa16.92■□□□□ 0.3
CHRNA1-208ENST00000636168 C1orf141Q5JVX7 400 aa16.91■□□□□ 0.3
CHRNA1-208ENST00000636168 NUDCQ9Y266 331 aa16.91■□□□□ 0.3
CHRNA1-208ENST00000636168 HSP90AB1P08238 724 aaKnown RBP16.9■□□□□ 0.3
CHRNA1-208ENST00000636168 DCAF5Q96JK2 942 aa16.9■□□□□ 0.3
CHRNA1-208ENST00000636168 PIGBQ92521 554 aa16.89■□□□□ 0.29
CHRNA1-208ENST00000636168 ANO8Q9HCE9 1232 aaPredicted RBP16.89■□□□□ 0.29
CHRNA1-208ENST00000636168 LY75O60449 1722 aa16.89■□□□□ 0.29
CHRNA1-208ENST00000636168 LRRC4BQ9NT99 713 aa16.88■□□□□ 0.29
CHRNA1-208ENST00000636168 TMOD3Q9NYL9 352 aa16.88■□□□□ 0.29
CHRNA1-208ENST00000636168 KDM6AO15550 1401 aaPredicted RBP16.88■□□□□ 0.29
CHRNA1-208ENST00000636168 U2AF1L5P0DN76 240 aaPredicted RBP16.88■□□□□ 0.29
CHRNA1-208ENST00000636168 U2AF1Q01081 240 aaKnown RBP eCLIP16.88■□□□□ 0.29
CHRNA1-208ENST00000636168 SLC27A3Q5K4L6 730 aa16.88■□□□□ 0.29
CHRNA1-208ENST00000636168 MTHFSDQ2M296 383 aaKnown RBP16.87■□□□□ 0.29
CHRNA1-208ENST00000636168 AKAP4Q5JQC9 854 aa16.87■□□□□ 0.29
CHRNA1-208ENST00000636168 ERICH6Q7L0X2 663 aa16.87■□□□□ 0.29
CHRNA1-208ENST00000636168 ERVV-2B6SEH9 535 aa16.86■□□□□ 0.29
CHRNA1-208ENST00000636168 KCNQ4P56696 695 aa16.86■□□□□ 0.29
CHRNA1-208ENST00000636168 RSPH6AQ9H0K4 717 aa16.86■□□□□ 0.29
CHRNA1-208ENST00000636168 PALLDQ8WX93 1383 aa16.86■□□□□ 0.29
CHRNA1-208ENST00000636168 PRKAR2BP31323 418 aa16.86■□□□□ 0.29
CHRNA1-208ENST00000636168 MYBBP1AQ9BQG0 1328 aaKnown RBP16.86■□□□□ 0.29
CHRNA1-208ENST00000636168 STK32BQ9NY57 414 aa16.85■□□□□ 0.29
CHRNA1-208ENST00000636168 CCNL1Q9UK58 526 aaPredicted RBP16.85■□□□□ 0.29
CHRNA1-208ENST00000636168 PAPPAQ13219 1627 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms