RNA–Protein interactions for RNA: ENST00000636116.1

SYNGAP1-211, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 161 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-211ENST00000636116 AMPHP49418 695 aa10.54□□□□□ -0.72
SYNGAP1-211ENST00000636116 COG3Q96JB2 828 aa10.54□□□□□ -0.72
SYNGAP1-211ENST00000636116 CCNL1Q9UK58 526 aaPredicted RBP10.54□□□□□ -0.72
SYNGAP1-211ENST00000636116 ANKRD36BQ8N2N9 1353 aa10.53□□□□□ -0.72
SYNGAP1-211ENST00000636116 GIGYF1O75420 1035 aaPredicted RBP10.53□□□□□ -0.72
SYNGAP1-211ENST00000636116 YBX3P16989 372 aaKnown RBP eCLIP10.53□□□□□ -0.72
SYNGAP1-211ENST00000636116 MSL1Q68DK7 614 aa10.53□□□□□ -0.72
SYNGAP1-211ENST00000636116 COL23A1Q86Y22 540 aaPredicted RBP10.53□□□□□ -0.72
SYNGAP1-211ENST00000636116 USHBP1Q8N6Y0 703 aa10.53□□□□□ -0.72
SYNGAP1-211ENST00000636116 NSD2O96028 1365 aa10.52□□□□□ -0.72
SYNGAP1-211ENST00000636116 RRS1Q15050 365 aaKnown RBP10.52□□□□□ -0.73
SYNGAP1-211ENST00000636116 NBPF6Q5VWK0 638 aa10.52□□□□□ -0.73
SYNGAP1-211ENST00000636116 NBPF4Q96M43 638 aa10.52□□□□□ -0.73
SYNGAP1-211ENST00000636116 ST20-MTHFSA0A0A6YYL1 179 aa10.51□□□□□ -0.73
SYNGAP1-211ENST00000636116 PUS7Q96PZ0 661 aaKnown RBP10.51□□□□□ -0.73
SYNGAP1-211ENST00000636116 TESK2Q96S53 571 aa10.51□□□□□ -0.73
SYNGAP1-211ENST00000636116 MEGF6O75095 1541 aa10.51□□□□□ -0.73
SYNGAP1-211ENST00000636116 TUBGCP6Q96RT7 1819 aa10.51□□□□□ -0.73
SYNGAP1-211ENST00000636116 RGPD2P0DJD1 1756 aa10.5□□□□□ -0.73
SYNGAP1-211ENST00000636116 GGNBP2Q9H3C7 697 aa10.5□□□□□ -0.73
SYNGAP1-211ENST00000636116 USP47Q96K76 1375 aa10.5□□□□□ -0.73
SYNGAP1-211ENST00000636116 DOT1LQ8TEK3 1739 aa10.5□□□□□ -0.73
SYNGAP1-211ENST00000636116 GRIN3BO60391 1043 aa10.49□□□□□ -0.73
SYNGAP1-211ENST00000636116 SMIM5Q71RC9 77 aa10.49□□□□□ -0.73
SYNGAP1-211ENST00000636116 FAM208AQ9UK61 1670 aaKnown RBP10.49□□□□□ -0.73
SYNGAP1-211ENST00000636116 COL24A1Q17RW2 1714 aa10.49□□□□□ -0.73
SYNGAP1-211ENST00000636116 QSER1Q2KHR3 1735 aa10.49□□□□□ -0.73
SYNGAP1-211ENST00000636116 LY75O60449 1722 aa10.48□□□□□ -0.73
SYNGAP1-211ENST00000636116 FYB1O15117 783 aa10.48□□□□□ -0.73
SYNGAP1-211ENST00000636116 MPRIPQ6WCQ1 1025 aa10.48□□□□□ -0.73
SYNGAP1-211ENST00000636116 RAPGEF4Q8WZA2 1011 aa10.48□□□□□ -0.73
SYNGAP1-211ENST00000636116 SHANK3Q9BYB0 1731 aa10.47□□□□□ -0.73
SYNGAP1-211ENST00000636116 TATP17735 454 aaPredicted RBP10.47□□□□□ -0.73
SYNGAP1-211ENST00000636116 HSP90AB2PQ58FF8 381 aa10.47□□□□□ -0.73
SYNGAP1-211ENST00000636116 WWC3Q9ULE0 1092 aa10.47□□□□□ -0.73
SYNGAP1-211ENST00000636116 TONSLQ96HA7 1378 aa10.47□□□□□ -0.73
SYNGAP1-211ENST00000636116 CYP27B1O15528 508 aa10.46□□□□□ -0.73
SYNGAP1-211ENST00000636116 AMIGO3Q86WK7 504 aa10.46□□□□□ -0.73
SYNGAP1-211ENST00000636116 ZNF526Q8TF50 670 aaPredicted RBP10.46□□□□□ -0.73
SYNGAP1-211ENST00000636116 ATP10DQ9P241 1426 aa10.45□□□□□ -0.74
SYNGAP1-211ENST00000636116 PALLDQ8WX93 1383 aa10.45□□□□□ -0.74
SYNGAP1-211ENST00000636116 CGNL1Q0VF96 1302 aa10.45□□□□□ -0.74
SYNGAP1-211ENST00000636116 CD2APQ9Y5K6 639 aa10.45□□□□□ -0.74
SYNGAP1-211ENST00000636116 GOLGB1Q14789 3259 aaKnown RBP10.44□□□□□ -0.74
SYNGAP1-211ENST00000636116 RTL1A6NKG5 1358 aa10.44□□□□□ -0.74
SYNGAP1-211ENST00000636116 PHF14O94880 888 aa10.44□□□□□ -0.74
SYNGAP1-211ENST00000636116 IFFO2Q5TF58 517 aa10.44□□□□□ -0.74
SYNGAP1-211ENST00000636116 FLAD1Q8NFF5 587 aa10.44□□□□□ -0.74
SYNGAP1-211ENST00000636116 PIGBQ92521 554 aa10.44□□□□□ -0.74
SYNGAP1-211ENST00000636116 PCDH11XQ9BZA7 1347 aa10.43□□□□□ -0.74
SYNGAP1-211ENST00000636116 PCDH11YQ9BZA8 1340 aa10.43□□□□□ -0.74
SYNGAP1-211ENST00000636116 AK7Q96M32 723 aa10.43□□□□□ -0.74
SYNGAP1-211ENST00000636116 GPBP1L1Q9HC44 474 aaPredicted RBP10.43□□□□□ -0.74
SYNGAP1-211ENST00000636116 SMG6Q86US8 1419 aaKnown RBP10.42□□□□□ -0.74
SYNGAP1-211ENST00000636116 INSRP06213 1382 aa10.42□□□□□ -0.74
SYNGAP1-211ENST00000636116 PPM1GO15355 546 aaPredicted RBP10.42□□□□□ -0.74
SYNGAP1-211ENST00000636116 SMARCC1Q92922 1105 aaPredicted RBP10.42□□□□□ -0.74
SYNGAP1-211ENST00000636116 CARD14Q9BXL6 1004 aa10.42□□□□□ -0.74
SYNGAP1-211ENST00000636116 EMILIN1Q9Y6C2 1016 aa10.42□□□□□ -0.74
SYNGAP1-211ENST00000636116 CEP350Q5VT06 3117 aa10.42□□□□□ -0.74
SYNGAP1-211ENST00000636116 C5P01031 1676 aa10.41□□□□□ -0.74
SYNGAP1-211ENST00000636116 IGSF1Q8N6C5 1336 aa10.41□□□□□ -0.74
SYNGAP1-211ENST00000636116 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.41□□□□□ -0.74
SYNGAP1-211ENST00000636116 SLC24A1O60721 1099 aa10.41□□□□□ -0.74
SYNGAP1-211ENST00000636116 TMF1P82094 1093 aa10.41□□□□□ -0.74
SYNGAP1-211ENST00000636116 LINC00116Q8NCU8 138 aa10.4□□□□□ -0.74
SYNGAP1-211ENST00000636116 ASAP1Q9ULH1 1129 aa10.4□□□□□ -0.74
SYNGAP1-211ENST00000636116 TAF1LQ8IZX4 1826 aa10.4□□□□□ -0.75
SYNGAP1-211ENST00000636116 FLT4P35916 1363 aa10.39□□□□□ -0.75
SYNGAP1-211ENST00000636116 LOC102724428A0A0B4J2F2 783 aa10.39□□□□□ -0.75
SYNGAP1-211ENST00000636116 HSPA6P17066 643 aa10.39□□□□□ -0.75
SYNGAP1-211ENST00000636116 SIK1P57059 783 aa10.39□□□□□ -0.75
SYNGAP1-211ENST00000636116 ITPK1Q13572 414 aa10.39□□□□□ -0.75
SYNGAP1-211ENST00000636116 ADCY9O60503 1353 aa10.39□□□□□ -0.75
SYNGAP1-211ENST00000636116 C4BP0C0L5 1744 aa10.38□□□□□ -0.75
SYNGAP1-211ENST00000636116 ITGB4P16144 1822 aa10.38□□□□□ -0.75
SYNGAP1-211ENST00000636116 GNPATO15228 680 aa10.38□□□□□ -0.75
SYNGAP1-211ENST00000636116 HMGB2P26583 209 aaKnown RBP10.38□□□□□ -0.75
SYNGAP1-211ENST00000636116 NKX1-1Q15270 411 aaPredicted RBP10.38□□□□□ -0.75
SYNGAP1-211ENST00000636116 EYA1Q99502 592 aa10.38□□□□□ -0.75
SYNGAP1-211ENST00000636116 SPG7Q9UQ90 795 aa10.38□□□□□ -0.75
SYNGAP1-211ENST00000636116 TOGARAM1Q9Y4F4 1720 aa10.38□□□□□ -0.75
SYNGAP1-211ENST00000636116 SSFA2P28290 1259 aa10.37□□□□□ -0.75
SYNGAP1-211ENST00000636116 ATP6V1AP38606 617 aa10.37□□□□□ -0.75
SYNGAP1-211ENST00000636116 TMOD3Q9NYL9 352 aa10.37□□□□□ -0.75
SYNGAP1-211ENST00000636116 MMP10P09238 476 aa10.36□□□□□ -0.75
SYNGAP1-211ENST00000636116 ATG3Q9NT62 314 aa10.36□□□□□ -0.75
SYNGAP1-211ENST00000636116 KIF24Q5T7B8 1368 aa10.36□□□□□ -0.75
SYNGAP1-211ENST00000636116 UBR3Q6ZT12 1888 aa10.36□□□□□ -0.75
SYNGAP1-211ENST00000636116 WASHC2AQ641Q2 1341 aa10.35□□□□□ -0.75
SYNGAP1-211ENST00000636116 NSD3Q9BZ95 1437 aa10.35□□□□□ -0.75
SYNGAP1-211ENST00000636116 A0A0G2JLW4 131 aa10.35□□□□□ -0.75
SYNGAP1-211ENST00000636116 KIF3CO14782 793 aa10.35□□□□□ -0.75
SYNGAP1-211ENST00000636116 PHKG2P15735 406 aa10.35□□□□□ -0.75
SYNGAP1-211ENST00000636116 TNNT2P45379 298 aaPredicted RBP10.35□□□□□ -0.75
SYNGAP1-211ENST00000636116 CDCA8Q53HL2 280 aa10.35□□□□□ -0.75
SYNGAP1-211ENST00000636116 MAP2P11137 1827 aaKnown RBP10.35□□□□□ -0.75
SYNGAP1-211ENST00000636116 IFNL2Q8IZJ0 200 aa10.34□□□□□ -0.75
SYNGAP1-211ENST00000636116 SLC4A9Q96Q91 983 aa10.34□□□□□ -0.75
SYNGAP1-211ENST00000636116 RBM42Q9BTD8 480 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms