RNA–Protein interactions for RNA: ENST00000635905.1

CLN5-205, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 2,791 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-205ENST00000635905 ARID3AQ99856 593 aa23.53■■□□□ 1.36
CLN5-205ENST00000635905 SDSP20132 328 aa23.52■■□□□ 1.36
CLN5-205ENST00000635905 WAPLQ7Z5K2 1190 aa23.52■■□□□ 1.36
CLN5-205ENST00000635905 ST18O60284 1047 aa23.52■■□□□ 1.36
CLN5-205ENST00000635905 NEXMIFQ5QGS0 1516 aa23.52■■□□□ 1.36
CLN5-205ENST00000635905 SMARCA5O60264 1052 aaPredicted RBP23.52■■□□□ 1.35
CLN5-205ENST00000635905 LRSAM1Q6UWE0 723 aa23.52■■□□□ 1.35
CLN5-205ENST00000635905 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.52■■□□□ 1.35
CLN5-205ENST00000635905 RNF214Q8ND24 703 aa23.52■■□□□ 1.35
CLN5-205ENST00000635905 IFT57Q9NWB7 429 aa23.52■■□□□ 1.35
CLN5-205ENST00000635905 PRAM1Q96QH2 718 aa23.51■■□□□ 1.35
CLN5-205ENST00000635905 API5Q9BZZ5 524 aaKnown RBP23.51■■□□□ 1.35
CLN5-205ENST00000635905 POLKQ9UBT6 870 aa23.51■■□□□ 1.35
CLN5-205ENST00000635905 REREQ9P2R6 1566 aa23.51■■□□□ 1.35
CLN5-205ENST00000635905 HDGFL2Q7Z4V5 671 aaPredicted RBP23.5■■□□□ 1.35
CLN5-205ENST00000635905 SLC52A1Q9NWF4 448 aa23.5■■□□□ 1.35
CLN5-205ENST00000635905 CABP1Q9NZU7 370 aa23.5■■□□□ 1.35
CLN5-205ENST00000635905 KIF13AQ9H1H9 1805 aa23.49■■□□□ 1.35
CLN5-205ENST00000635905 ZNF853P0CG23 659 aa23.49■■□□□ 1.35
CLN5-205ENST00000635905 CFAP44Q96MT7 982 aa23.49■■□□□ 1.35
CLN5-205ENST00000635905 MAP7D2Q96T17 732 aa23.47■■□□□ 1.35
CLN5-205ENST00000635905 KNDC1Q76NI1 1749 aa23.47■■□□□ 1.35
CLN5-205ENST00000635905 CLTCQ00610 1675 aaKnown RBP23.47■■□□□ 1.35
CLN5-205ENST00000635905 PREX1Q8TCU6 1659 aa23.47■■□□□ 1.35
CLN5-205ENST00000635905 FAM83GA6ND36 823 aa23.46■■□□□ 1.35
CLN5-205ENST00000635905 ZFYVE9O95405 1425 aa23.46■■□□□ 1.35
CLN5-205ENST00000635905 TRHP20396 242 aaPredicted RBP23.46■■□□□ 1.35
CLN5-205ENST00000635905 CCDC39Q9UFE4 941 aa23.46■■□□□ 1.35
CLN5-205ENST00000635905 CSPP1Q1MSJ5 1256 aa23.45■■□□□ 1.34
CLN5-205ENST00000635905 CASC1Q6TDU7 716 aa23.45■■□□□ 1.34
CLN5-205ENST00000635905 ANKRD44Q8N8A2 993 aa23.45■■□□□ 1.34
CLN5-205ENST00000635905 DCTN1Q14203 1278 aa23.45■■□□□ 1.34
CLN5-205ENST00000635905 ANKRD26Q9UPS8 1709 aa23.44■■□□□ 1.34
CLN5-205ENST00000635905 ZBTB7CA1YPR0 619 aa23.44■■□□□ 1.34
CLN5-205ENST00000635905 EMILIN1Q9Y6C2 1016 aa23.44■■□□□ 1.34
CLN5-205ENST00000635905 CDK19Q9BWU1 502 aa23.44■■□□□ 1.34
CLN5-205ENST00000635905 MCM5P33992 734 aa23.43■■□□□ 1.34
CLN5-205ENST00000635905 PRDM4Q9UKN5 801 aa23.43■■□□□ 1.34
CLN5-205ENST00000635905 CDC42BPGQ6DT37 1551 aa23.43■■□□□ 1.34
CLN5-205ENST00000635905 NCKAP5LQ9HCH0 1330 aa23.43■■□□□ 1.34
CLN5-205ENST00000635905 ESF1Q9H501 851 aaKnown RBP23.43■■□□□ 1.34
CLN5-205ENST00000635905 ATP10DQ9P241 1426 aa23.42■■□□□ 1.34
CLN5-205ENST00000635905 CEP85Q6P2H3 762 aa23.42■■□□□ 1.34
CLN5-205ENST00000635905 DYNC1I1O14576 645 aa23.42■■□□□ 1.34
CLN5-205ENST00000635905 REC8O95072 547 aa23.42■■□□□ 1.34
CLN5-205ENST00000635905 TMEM131LA2VDJ0 1609 aa23.41■■□□□ 1.34
CLN5-205ENST00000635905 PTPRMP28827 1452 aa23.41■■□□□ 1.34
CLN5-205ENST00000635905 SASS6Q6UVJ0 657 aa23.41■■□□□ 1.34
CLN5-205ENST00000635905 NEK4P51957 841 aa23.4■■□□□ 1.34
CLN5-205ENST00000635905 KRT24Q2M2I5 525 aa23.4■■□□□ 1.34
CLN5-205ENST00000635905 TMX3Q96JJ7 454 aa23.4■■□□□ 1.34
CLN5-205ENST00000635905 ERC2O15083 957 aa23.4■■□□□ 1.34
CLN5-205ENST00000635905 PTMAP06454 111 aaKnown RBP23.4■■□□□ 1.34
CLN5-205ENST00000635905 YTHDC2Q9H6S0 1430 aaKnown RBP23.4■■□□□ 1.34
CLN5-205ENST00000635905 MPNDQ8N594 471 aa23.39■■□□□ 1.34
CLN5-205ENST00000635905 MBD3O95983 291 aa23.39■■□□□ 1.33
CLN5-205ENST00000635905 IL13P35225 146 aa23.39■■□□□ 1.33
CLN5-205ENST00000635905 FOXD4L6Q3SYB3 417 aaPredicted RBP23.38■■□□□ 1.33
CLN5-205ENST00000635905 FOXD4L3Q6VB84 417 aaPredicted RBP23.38■■□□□ 1.33
CLN5-205ENST00000635905 NOL8Q76FK4 1167 aaKnown RBP23.38■■□□□ 1.33
CLN5-205ENST00000635905 RPAP2Q8IXW5 612 aaPredicted RBP23.38■■□□□ 1.33
CLN5-205ENST00000635905 KIF24Q5T7B8 1368 aa23.38■■□□□ 1.33
CLN5-205ENST00000635905 NUTM2FA1L443 756 aa23.38■■□□□ 1.33
CLN5-205ENST00000635905 TXNDC2Q86VQ3 553 aa23.38■■□□□ 1.33
CLN5-205ENST00000635905 MEIS3Q99687 375 aa23.37■■□□□ 1.33
CLN5-205ENST00000635905 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.37■■□□□ 1.33
CLN5-205ENST00000635905 TSPY26PQ9H489 355 aa23.36■■□□□ 1.33
CLN5-205ENST00000635905 BRD1O95696 1058 aa23.36■■□□□ 1.33
CLN5-205ENST00000635905 JARID2Q92833 1246 aaPredicted RBP23.36■■□□□ 1.33
CLN5-205ENST00000635905 RIMS2Q9UQ26 1411 aa23.35■■□□□ 1.33
CLN5-205ENST00000635905 MSH6P52701 1360 aa23.35■■□□□ 1.33
CLN5-205ENST00000635905 RTL1A6NKG5 1358 aa23.35■■□□□ 1.33
CLN5-205ENST00000635905 GDPD2Q9HCC8 539 aa23.35■■□□□ 1.33
CLN5-205ENST00000635905 TSHZ3Q63HK5 1081 aa23.34■■□□□ 1.33
CLN5-205ENST00000635905 ZRANB1Q9UGI0 708 aa23.34■■□□□ 1.33
CLN5-205ENST00000635905 LMOD3Q0VAK6 560 aa23.34■■□□□ 1.33
CLN5-205ENST00000635905 KIAA2012Q0VF49 1180 aa23.34■■□□□ 1.33
CLN5-205ENST00000635905 RGS12O14924 1447 aa23.33■■□□□ 1.33
CLN5-205ENST00000635905 MTERF4Q7Z6M4 381 aaKnown RBP23.33■■□□□ 1.32
CLN5-205ENST00000635905 PRDM10Q9NQV6 1147 aa23.33■■□□□ 1.32
CLN5-205ENST00000635905 PALD1Q9ULE6 856 aa23.32■■□□□ 1.32
CLN5-205ENST00000635905 GADD45BO75293 160 aaPredicted RBP23.32■■□□□ 1.32
CLN5-205ENST00000635905 DNTTIP2Q5QJE6 756 aaKnown RBP23.32■■□□□ 1.32
CLN5-205ENST00000635905 ZNF830Q96NB3 372 aaPredicted RBP23.32■■□□□ 1.32
CLN5-205ENST00000635905 TSC1Q92574 1164 aa23.31■■□□□ 1.32
CLN5-205ENST00000635905 KIF20BQ96Q89 1820 aa23.31■■□□□ 1.32
CLN5-205ENST00000635905 A2ML1A8K2U0 1454 aa23.31■■□□□ 1.32
CLN5-205ENST00000635905 PDE1AP54750 535 aa23.31■■□□□ 1.32
CLN5-205ENST00000635905 NME9Q86XW9 330 aa23.31■■□□□ 1.32
CLN5-205ENST00000635905 ARHGEF40Q8TER5 1519 aa23.3■■□□□ 1.32
CLN5-205ENST00000635905 METP08581 1390 aa23.3■■□□□ 1.32
CLN5-205ENST00000635905 RRS1Q15050 365 aaKnown RBP23.3■■□□□ 1.32
CLN5-205ENST00000635905 CUL4AQ13619 759 aa23.29■■□□□ 1.32
CLN5-205ENST00000635905 ALKQ9UM73 1620 aa23.28■■□□□ 1.32
CLN5-205ENST00000635905 SMAP1Q8IYB5 467 aaPredicted RBP23.28■■□□□ 1.32
CLN5-205ENST00000635905 SLC26A8Q96RN1 970 aa23.28■■□□□ 1.32
CLN5-205ENST00000635905 TPRNQ4KMQ1 711 aa23.27■■□□□ 1.32
CLN5-205ENST00000635905 SYAP1Q96A49 352 aaPredicted RBP23.27■■□□□ 1.32
CLN5-205ENST00000635905 MAP2P11137 1827 aaKnown RBP23.27■■□□□ 1.32
CLN5-205ENST00000635905 C17orf53Q8N3J3 647 aaPredicted RBP23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms