RNA–Protein interactions for RNA: ENST00000635759.1

CHRNA7-205, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 1 (best)

Gene CHRNA7, Length 273 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-205ENST00000635759 TAF1LQ8IZX4 1826 aa12.03□□□□□ -0.48
CHRNA7-205ENST00000635759 IP6K1Q92551 441 aa12.03□□□□□ -0.48
CHRNA7-205ENST00000635759 PNPLA7Q6ZV29 1317 aa12.03□□□□□ -0.48
CHRNA7-205ENST00000635759 C5P01031 1676 aa12.03□□□□□ -0.48
CHRNA7-205ENST00000635759 KCNQ4P56696 695 aa12.02□□□□□ -0.49
CHRNA7-205ENST00000635759 PRIM1P49642 420 aaKnown RBP12.01□□□□□ -0.49
CHRNA7-205ENST00000635759 ANKRD36BQ8N2N9 1353 aa12.01□□□□□ -0.49
CHRNA7-205ENST00000635759 ITGB4P16144 1822 aa12□□□□□ -0.49
CHRNA7-205ENST00000635759 KIF20BQ96Q89 1820 aa12□□□□□ -0.49
CHRNA7-205ENST00000635759 MSH5O43196 834 aa12□□□□□ -0.49
CHRNA7-205ENST00000635759 GIGYF1O75420 1035 aaPredicted RBP12□□□□□ -0.49
CHRNA7-205ENST00000635759 AMPHP49418 695 aa12□□□□□ -0.49
CHRNA7-205ENST00000635759 COG3Q96JB2 828 aa12□□□□□ -0.49
CHRNA7-205ENST00000635759 HOXC9P31274 260 aa11.99□□□□□ -0.49
CHRNA7-205ENST00000635759 NLGN2Q8NFZ4 835 aa11.99□□□□□ -0.49
CHRNA7-205ENST00000635759 CCNL1Q9UK58 526 aaPredicted RBP11.99□□□□□ -0.49
CHRNA7-205ENST00000635759 MEGF6O75095 1541 aa11.98□□□□□ -0.49
CHRNA7-205ENST00000635759 NSD2O96028 1365 aa11.98□□□□□ -0.49
CHRNA7-205ENST00000635759 MAP3K19Q56UN5 1328 aa11.98□□□□□ -0.49
CHRNA7-205ENST00000635759 ZCRB1Q8TBF4 217 aaKnown RBP11.98□□□□□ -0.49
CHRNA7-205ENST00000635759 TONSLQ96HA7 1378 aa11.97□□□□□ -0.49
CHRNA7-205ENST00000635759 USP47Q96K76 1375 aa11.97□□□□□ -0.49
CHRNA7-205ENST00000635759 FBLN1P23142 703 aa11.97□□□□□ -0.49
CHRNA7-205ENST00000635759 PUS7Q96PZ0 661 aaKnown RBP11.97□□□□□ -0.49
CHRNA7-205ENST00000635759 SMG6Q86US8 1419 aaKnown RBP11.95□□□□□ -0.5
CHRNA7-205ENST00000635759 GRIN3BO60391 1043 aa11.95□□□□□ -0.5
CHRNA7-205ENST00000635759 COL23A1Q86Y22 540 aaPredicted RBP11.95□□□□□ -0.5
CHRNA7-205ENST00000635759 UBR3Q6ZT12 1888 aa11.95□□□□□ -0.5
CHRNA7-205ENST00000635759 C4BP0C0L5 1744 aa11.94□□□□□ -0.5
CHRNA7-205ENST00000635759 TOGARAM1Q9Y4F4 1720 aa11.94□□□□□ -0.5
CHRNA7-205ENST00000635759 RTL1A6NKG5 1358 aa11.94□□□□□ -0.5
CHRNA7-205ENST00000635759 YBX3P16989 372 aaKnown RBP eCLIP11.94□□□□□ -0.5
CHRNA7-205ENST00000635759 MSL1Q68DK7 614 aa11.94□□□□□ -0.5
CHRNA7-205ENST00000635759 USHBP1Q8N6Y0 703 aa11.94□□□□□ -0.5
CHRNA7-205ENST00000635759 RAPGEF4Q8WZA2 1011 aa11.94□□□□□ -0.5
CHRNA7-205ENST00000635759 CEP350Q5VT06 3117 aa11.93□□□□□ -0.5
CHRNA7-205ENST00000635759 CGNL1Q0VF96 1302 aa11.93□□□□□ -0.5
CHRNA7-205ENST00000635759 ST20-MTHFSA0A0A6YYL1 179 aa11.93□□□□□ -0.5
CHRNA7-205ENST00000635759 RRS1Q15050 365 aaKnown RBP11.93□□□□□ -0.5
CHRNA7-205ENST00000635759 NBPF6Q5VWK0 638 aa11.93□□□□□ -0.5
CHRNA7-205ENST00000635759 NBPF4Q96M43 638 aa11.93□□□□□ -0.5
CHRNA7-205ENST00000635759 PKD1L3Q7Z443 1732 aa11.93□□□□□ -0.5
CHRNA7-205ENST00000635759 MAP2P11137 1827 aaKnown RBP11.93□□□□□ -0.5
CHRNA7-205ENST00000635759 TATP17735 454 aaPredicted RBP11.92□□□□□ -0.5
CHRNA7-205ENST00000635759 TESK2Q96S53 571 aa11.92□□□□□ -0.5
CHRNA7-205ENST00000635759 PCDH11XQ9BZA7 1347 aa11.91□□□□□ -0.5
CHRNA7-205ENST00000635759 PCDH11YQ9BZA8 1340 aa11.91□□□□□ -0.5
CHRNA7-205ENST00000635759 SLC24A1O60721 1099 aa11.91□□□□□ -0.5
CHRNA7-205ENST00000635759 HMGB2P26583 209 aaKnown RBP11.91□□□□□ -0.5
CHRNA7-205ENST00000635759 GGNBP2Q9H3C7 697 aa11.91□□□□□ -0.5
CHRNA7-205ENST00000635759 MPRIPQ6WCQ1 1025 aa11.9□□□□□ -0.5
CHRNA7-205ENST00000635759 FLAD1Q8NFF5 587 aa11.9□□□□□ -0.5
CHRNA7-205ENST00000635759 ATP10DQ9P241 1426 aa11.9□□□□□ -0.5
CHRNA7-205ENST00000635759 PALLDQ8WX93 1383 aa11.9□□□□□ -0.5
CHRNA7-205ENST00000635759 FYB1O15117 783 aa11.89□□□□□ -0.51
CHRNA7-205ENST00000635759 CD2APQ9Y5K6 639 aa11.89□□□□□ -0.51
CHRNA7-205ENST00000635759 HSP90AB2PQ58FF8 381 aa11.88□□□□□ -0.51
CHRNA7-205ENST00000635759 AK7Q96M32 723 aa11.88□□□□□ -0.51
CHRNA7-205ENST00000635759 GPBP1L1Q9HC44 474 aaPredicted RBP11.88□□□□□ -0.51
CHRNA7-205ENST00000635759 INSRP06213 1382 aa11.88□□□□□ -0.51
CHRNA7-205ENST00000635759 FLT4P35916 1363 aa11.88□□□□□ -0.51
CHRNA7-205ENST00000635759 ANKRD26Q9UPS8 1709 aa11.88□□□□□ -0.51
CHRNA7-205ENST00000635759 TMF1P82094 1093 aa11.87□□□□□ -0.51
CHRNA7-205ENST00000635759 ZNF526Q8TF50 670 aaPredicted RBP11.87□□□□□ -0.51
CHRNA7-205ENST00000635759 N4BP2Q86UW6 1770 aaPredicted RBP11.87□□□□□ -0.51
CHRNA7-205ENST00000635759 NSD3Q9BZ95 1437 aa11.86□□□□□ -0.51
CHRNA7-205ENST00000635759 CYP27B1O15528 508 aa11.86□□□□□ -0.51
CHRNA7-205ENST00000635759 PHF14O94880 888 aa11.86□□□□□ -0.51
CHRNA7-205ENST00000635759 IFFO2Q5TF58 517 aa11.86□□□□□ -0.51
CHRNA7-205ENST00000635759 SMARCC1Q92922 1105 aaPredicted RBP11.86□□□□□ -0.51
CHRNA7-205ENST00000635759 KIF13BQ9NQT8 1826 aa11.86□□□□□ -0.51
CHRNA7-205ENST00000635759 KIF24Q5T7B8 1368 aa11.85□□□□□ -0.51
CHRNA7-205ENST00000635759 WWC3Q9ULE0 1092 aa11.85□□□□□ -0.51
CHRNA7-205ENST00000635759 IGSF1Q8N6C5 1336 aa11.85□□□□□ -0.51
CHRNA7-205ENST00000635759 ADCY9O60503 1353 aa11.83□□□□□ -0.52
CHRNA7-205ENST00000635759 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.83□□□□□ -0.52
CHRNA7-205ENST00000635759 PPM1GO15355 546 aaPredicted RBP11.83□□□□□ -0.52
CHRNA7-205ENST00000635759 SMIM5Q71RC9 77 aa11.83□□□□□ -0.52
CHRNA7-205ENST00000635759 AMIGO3Q86WK7 504 aa11.83□□□□□ -0.52
CHRNA7-205ENST00000635759 PIGBQ92521 554 aa11.83□□□□□ -0.52
CHRNA7-205ENST00000635759 SPG7Q9UQ90 795 aa11.83□□□□□ -0.52
CHRNA7-205ENST00000635759 KIAA1551Q9HCM1 1747 aa11.83□□□□□ -0.52
CHRNA7-205ENST00000635759 SSFA2P28290 1259 aa11.82□□□□□ -0.52
CHRNA7-205ENST00000635759 CDCA8Q53HL2 280 aa11.82□□□□□ -0.52
CHRNA7-205ENST00000635759 EMILIN1Q9Y6C2 1016 aa11.82□□□□□ -0.52
CHRNA7-205ENST00000635759 BRCA1P38398 1863 aaKnown RBP11.81□□□□□ -0.52
CHRNA7-205ENST00000635759 COL5A3P25940 1745 aaPredicted RBP11.81□□□□□ -0.52
CHRNA7-205ENST00000635759 LOC102724428A0A0B4J2F2 783 aa11.81□□□□□ -0.52
CHRNA7-205ENST00000635759 HSPA6P17066 643 aa11.81□□□□□ -0.52
CHRNA7-205ENST00000635759 SIK1P57059 783 aa11.81□□□□□ -0.52
CHRNA7-205ENST00000635759 LINC00116Q8NCU8 138 aa11.81□□□□□ -0.52
CHRNA7-205ENST00000635759 TMOD3Q9NYL9 352 aa11.81□□□□□ -0.52
CHRNA7-205ENST00000635759 NCAPD2Q15021 1401 aa11.8□□□□□ -0.52
CHRNA7-205ENST00000635759 CICQ96RK0 1608 aaPredicted RBP11.8□□□□□ -0.52
CHRNA7-205ENST00000635759 GNPATO15228 680 aa11.8□□□□□ -0.52
CHRNA7-205ENST00000635759 ATP6V1AP38606 617 aa11.8□□□□□ -0.52
CHRNA7-205ENST00000635759 NKX1-1Q15270 411 aaPredicted RBP11.8□□□□□ -0.52
CHRNA7-205ENST00000635759 ZNF831Q5JPB2 1677 aa11.8□□□□□ -0.52
CHRNA7-205ENST00000635759 C4AP0C0L4 1744 aa11.8□□□□□ -0.52
CHRNA7-205ENST00000635759 ASAP1Q9ULH1 1129 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms