RNA–Protein interactions for RNA: ENST00000635742.1

CACNA1A-216, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,910 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-216ENST00000635742 GNAI1P63096 354 aa12.94□□□□□ -0.34
CACNA1A-216ENST00000635742 EXOC6Q8TAG9 804 aa12.94□□□□□ -0.34
CACNA1A-216ENST00000635742 MBIPQ9NS73 344 aa12.94□□□□□ -0.34
CACNA1A-216ENST00000635742 ARXQ96QS3 562 aa12.94□□□□□ -0.34
CACNA1A-216ENST00000635742 MAP3K5Q99683 1374 aa12.93□□□□□ -0.34
CACNA1A-216ENST00000635742 COL22A1Q8NFW1 1626 aaPredicted RBP12.93□□□□□ -0.34
CACNA1A-216ENST00000635742 CFAP44Q96MT7 982 aa12.93□□□□□ -0.34
CACNA1A-216ENST00000635742 CRBNQ96SW2 442 aa12.93□□□□□ -0.34
CACNA1A-216ENST00000635742 BCL2L13Q9BXK5 485 aa12.93□□□□□ -0.34
CACNA1A-216ENST00000635742 COL16A1Q07092 1604 aaPredicted RBP12.92□□□□□ -0.34
CACNA1A-216ENST00000635742 PHLPP1O60346 1717 aa12.92□□□□□ -0.34
CACNA1A-216ENST00000635742 CT47B1P0C2W7 299 aaPredicted RBP12.92□□□□□ -0.34
CACNA1A-216ENST00000635742 B4GALNT3Q6L9W6 998 aa12.92□□□□□ -0.34
CACNA1A-216ENST00000635742 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.92□□□□□ -0.34
CACNA1A-216ENST00000635742 VIRMAQ69YN4 1812 aaKnown RBP12.91□□□□□ -0.34
CACNA1A-216ENST00000635742 HAP1P54257 671 aaPredicted RBP12.91□□□□□ -0.34
CACNA1A-216ENST00000635742 RTF1Q92541 710 aaKnown RBP12.91□□□□□ -0.34
CACNA1A-216ENST00000635742 PRDM11Q9NQV5 511 aa12.91□□□□□ -0.34
CACNA1A-216ENST00000635742 MEGF6O75095 1541 aa12.9□□□□□ -0.34
CACNA1A-216ENST00000635742 GNAT3A8MTJ3 354 aa12.9□□□□□ -0.34
CACNA1A-216ENST00000635742 NLRP2Q9NX02 1062 aa12.9□□□□□ -0.34
CACNA1A-216ENST00000635742 COL5A2P05997 1499 aaPredicted RBP12.9□□□□□ -0.34
CACNA1A-216ENST00000635742 HTATSF1O43719 755 aaKnown RBP12.9□□□□□ -0.35
CACNA1A-216ENST00000635742 TSPYL6Q8N831 410 aa12.9□□□□□ -0.35
CACNA1A-216ENST00000635742 CSB-PGBD3P0DP91 1061 aa12.89□□□□□ -0.35
CACNA1A-216ENST00000635742 SSH1Q8WYL5 1049 aa12.89□□□□□ -0.35
CACNA1A-216ENST00000635742 PKD1L3Q7Z443 1732 aa12.89□□□□□ -0.35
CACNA1A-216ENST00000635742 CHL1O00533 1208 aa12.88□□□□□ -0.35
CACNA1A-216ENST00000635742 IL17REQ8NFR9 667 aa12.88□□□□□ -0.35
CACNA1A-216ENST00000635742 FRAT1Q92837 279 aaPredicted RBP12.88□□□□□ -0.35
CACNA1A-216ENST00000635742 SMC4Q9NTJ3 1288 aa12.88□□□□□ -0.35
CACNA1A-216ENST00000635742 TNNQ9UQP3 1299 aa12.88□□□□□ -0.35
CACNA1A-216ENST00000635742 CANXP27824 592 aaKnown RBP12.88□□□□□ -0.35
CACNA1A-216ENST00000635742 PLEKHO1Q53GL0 409 aaPredicted RBP12.88□□□□□ -0.35
CACNA1A-216ENST00000635742 ZNF530Q6P9A1 599 aaPredicted RBP12.88□□□□□ -0.35
CACNA1A-216ENST00000635742 C8orf58Q8NAV2 365 aa12.88□□□□□ -0.35
CACNA1A-216ENST00000635742 ADAMTS7Q9UKP4 1686 aa12.87□□□□□ -0.35
CACNA1A-216ENST00000635742 ELL2O00472 640 aaPredicted RBP12.87□□□□□ -0.35
CACNA1A-216ENST00000635742 VAMP4O75379 141 aa12.87□□□□□ -0.35
CACNA1A-216ENST00000635742 KRT24Q2M2I5 525 aa12.87□□□□□ -0.35
CACNA1A-216ENST00000635742 CEMIPQ8WUJ3 1361 aa12.87□□□□□ -0.35
CACNA1A-216ENST00000635742 PARP4Q9UKK3 1724 aaKnown RBP12.87□□□□□ -0.35
CACNA1A-216ENST00000635742 COL14A1Q05707 1796 aaKnown RBP12.86□□□□□ -0.35
CACNA1A-216ENST00000635742 TWISTNBQ3B726 338 aaPredicted RBP12.86□□□□□ -0.35
CACNA1A-216ENST00000635742 AMOTQ4VCS5 1084 aa12.86□□□□□ -0.35
CACNA1A-216ENST00000635742 MIS18AQ9NYP9 233 aa12.86□□□□□ -0.35
CACNA1A-216ENST00000635742 WDR17Q8IZU2 1322 aa12.86□□□□□ -0.35
CACNA1A-216ENST00000635742 KDM3BQ7LBC6 1761 aa12.86□□□□□ -0.35
CACNA1A-216ENST00000635742 PIP4K2BP78356 416 aa12.86□□□□□ -0.35
CACNA1A-216ENST00000635742 AKAP4Q5JQC9 854 aa12.86□□□□□ -0.35
CACNA1A-216ENST00000635742 PANK1Q8TE04 598 aa12.86□□□□□ -0.35
CACNA1A-216ENST00000635742 SIPA1L3O60292 1781 aaPredicted RBP12.85□□□□□ -0.35
CACNA1A-216ENST00000635742 TOM1O60784 492 aa12.85□□□□□ -0.35
CACNA1A-216ENST00000635742 PDE3AQ14432 1141 aa12.85□□□□□ -0.35
CACNA1A-216ENST00000635742 ALDH1L2Q3SY69 923 aa12.85□□□□□ -0.35
CACNA1A-216ENST00000635742 RAPGEF4Q8WZA2 1011 aa12.85□□□□□ -0.35
CACNA1A-216ENST00000635742 CCDC136Q96JN2 1154 aa12.85□□□□□ -0.35
CACNA1A-216ENST00000635742 TSPYL4Q9UJ04 414 aa12.85□□□□□ -0.35
CACNA1A-216ENST00000635742 RLBP1P12271 317 aa12.84□□□□□ -0.35
CACNA1A-216ENST00000635742 AEBP2Q6ZN18 517 aaPredicted RBP12.84□□□□□ -0.35
CACNA1A-216ENST00000635742 LGR6Q9HBX8 967 aa12.84□□□□□ -0.35
CACNA1A-216ENST00000635742 OVOS2A0A0G2JMS6 1433 aa12.84□□□□□ -0.35
CACNA1A-216ENST00000635742 TATP17735 454 aaPredicted RBP12.84□□□□□ -0.35
CACNA1A-216ENST00000635742 ZNF428Q96B54 188 aa12.84□□□□□ -0.35
CACNA1A-216ENST00000635742 SCN11AQ9UI33 1791 aa12.84□□□□□ -0.35
CACNA1A-216ENST00000635742 PLCH1Q4KWH8 1693 aa12.83□□□□□ -0.36
CACNA1A-216ENST00000635742 PLEKHG2Q9H7P9 1386 aa12.83□□□□□ -0.36
CACNA1A-216ENST00000635742 TCERG1O14776 1098 aaKnown RBP12.83□□□□□ -0.36
CACNA1A-216ENST00000635742 C1orf141Q5JVX7 400 aa12.83□□□□□ -0.36
CACNA1A-216ENST00000635742 ZKSCAN2Q63HK3 967 aa12.83□□□□□ -0.36
CACNA1A-216ENST00000635742 MPRIPQ6WCQ1 1025 aa12.83□□□□□ -0.36
CACNA1A-216ENST00000635742 COG6Q9Y2V7 657 aa12.83□□□□□ -0.36
CACNA1A-216ENST00000635742 SHANK3Q9BYB0 1731 aa12.83□□□□□ -0.36
CACNA1A-216ENST00000635742 KIF16BQ96L93 1317 aa12.82□□□□□ -0.36
CACNA1A-216ENST00000635742 UBAP1LF5GYI3 381 aa12.82□□□□□ -0.36
CACNA1A-216ENST00000635742 TOM1L2Q6ZVM7 507 aa12.82□□□□□ -0.36
CACNA1A-216ENST00000635742 MRPL50Q8N5N7 158 aaKnown RBP12.82□□□□□ -0.36
CACNA1A-216ENST00000635742 CLUAP1Q96AJ1 413 aa12.82□□□□□ -0.36
CACNA1A-216ENST00000635742 STRN4Q9NRL3 753 aa12.82□□□□□ -0.36
CACNA1A-216ENST00000635742 NOB1Q9ULX3 412 aaKnown RBP12.82□□□□□ -0.36
CACNA1A-216ENST00000635742 KDM6AO15550 1401 aaPredicted RBP12.82□□□□□ -0.36
CACNA1A-216ENST00000635742 RNMTO43148 476 aaKnown RBP12.82□□□□□ -0.36
CACNA1A-216ENST00000635742 TRIM27P14373 513 aa12.82□□□□□ -0.36
CACNA1A-216ENST00000635742 LARP1Q6PKG0 1096 aaKnown RBP12.82□□□□□ -0.36
CACNA1A-216ENST00000635742 EIF5BO60841 1220 aaKnown RBP12.81□□□□□ -0.36
CACNA1A-216ENST00000635742 BRPF1P55201 1214 aaPredicted RBP12.81□□□□□ -0.36
CACNA1A-216ENST00000635742 TAF7Q15545 349 aaPredicted RBP12.81□□□□□ -0.36
CACNA1A-216ENST00000635742 NRAPQ86VF7 1730 aa12.81□□□□□ -0.36
CACNA1A-216ENST00000635742 ATF7IPQ6VMQ6 1270 aa12.8□□□□□ -0.36
CACNA1A-216ENST00000635742 PHKG2P15735 406 aa12.8□□□□□ -0.36
CACNA1A-216ENST00000635742 DZIP1LQ8IYY4 767 aaKnown RBP12.8□□□□□ -0.36
CACNA1A-216ENST00000635742 CARD10Q9BWT7 1032 aa12.8□□□□□ -0.36
CACNA1A-216ENST00000635742 BABAM1Q9NWV8 329 aa12.8□□□□□ -0.36
CACNA1A-216ENST00000635742 BTG4Q9NY30 223 aa12.8□□□□□ -0.36
CACNA1A-216ENST00000635742 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.8□□□□□ -0.36
CACNA1A-216ENST00000635742 SPG7Q9UQ90 795 aa12.8□□□□□ -0.36
CACNA1A-216ENST00000635742 MRC1P22897 1456 aa12.79□□□□□ -0.36
CACNA1A-216ENST00000635742 WNK3Q9BYP7 1800 aa12.79□□□□□ -0.36
CACNA1A-216ENST00000635742 CYP27B1O15528 508 aa12.78□□□□□ -0.36
CACNA1A-216ENST00000635742 EVA1CP58658 441 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms