RNA–Protein interactions for RNA: ENST00000635722.1

CHRNA7-204, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 917 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-204ENST00000635722 ANKRD36BQ8N2N9 1353 aa29.39■■■□□ 2.3
CHRNA7-204ENST00000635722 AMPHP49418 695 aa29.38■■■□□ 2.29
CHRNA7-204ENST00000635722 PRIM1P49642 420 aaKnown RBP29.38■■■□□ 2.29
CHRNA7-204ENST00000635722 RRS1Q15050 365 aaKnown RBP29.38■■■□□ 2.29
CHRNA7-204ENST00000635722 ZNF784Q8NCA9 323 aaPredicted RBP29.38■■■□□ 2.29
CHRNA7-204ENST00000635722 PNPLA7Q6ZV29 1317 aa29.38■■■□□ 2.29
CHRNA7-204ENST00000635722 USHBP1Q8N6Y0 703 aa29.37■■■□□ 2.29
CHRNA7-204ENST00000635722 MAP3K5Q99683 1374 aa29.37■■■□□ 2.29
CHRNA7-204ENST00000635722 KIF20BQ96Q89 1820 aa29.36■■■□□ 2.29
CHRNA7-204ENST00000635722 RTL1A6NKG5 1358 aa29.35■■■□□ 2.29
CHRNA7-204ENST00000635722 SLC27A3Q5K4L6 730 aa29.33■■■□□ 2.29
CHRNA7-204ENST00000635722 KLHL34Q8N239 644 aa29.33■■■□□ 2.29
CHRNA7-204ENST00000635722 GGNBP2Q9H3C7 697 aa29.33■■■□□ 2.29
CHRNA7-204ENST00000635722 NBPF6Q5VWK0 638 aa29.32■■■□□ 2.28
CHRNA7-204ENST00000635722 ZCRB1Q8TBF4 217 aaKnown RBP29.32■■■□□ 2.28
CHRNA7-204ENST00000635722 NBPF4Q96M43 638 aa29.32■■■□□ 2.28
CHRNA7-204ENST00000635722 USP47Q96K76 1375 aa29.3■■■□□ 2.28
CHRNA7-204ENST00000635722 FYB1O15117 783 aa29.29■■■□□ 2.28
CHRNA7-204ENST00000635722 TFCP2L1Q9NZI6 479 aa29.29■■■□□ 2.28
CHRNA7-204ENST00000635722 TOGARAM1Q9Y4F4 1720 aa29.28■■■□□ 2.28
CHRNA7-204ENST00000635722 C5P01031 1676 aa29.28■■■□□ 2.28
CHRNA7-204ENST00000635722 NLGN2Q8NFZ4 835 aa29.26■■■□□ 2.27
CHRNA7-204ENST00000635722 CCNL1Q9UK58 526 aaPredicted RBP29.26■■■□□ 2.27
CHRNA7-204ENST00000635722 SMG6Q86US8 1419 aaKnown RBP29.24■■■□□ 2.27
CHRNA7-204ENST00000635722 SLC16A10Q8TF71 515 aa29.24■■■□□ 2.27
CHRNA7-204ENST00000635722 HSP90AB2PQ58FF8 381 aa29.23■■■□□ 2.27
CHRNA7-204ENST00000635722 POLD1P28340 1107 aa29.22■■■□□ 2.27
CHRNA7-204ENST00000635722 GPR162Q16538 588 aa29.22■■■□□ 2.27
CHRNA7-204ENST00000635722 TAF1LQ8IZX4 1826 aa29.22■■■□□ 2.27
CHRNA7-204ENST00000635722 TMF1P82094 1093 aa29.21■■■□□ 2.27
CHRNA7-204ENST00000635722 PELP1Q8IZL8 1130 aaKnown RBP29.21■■■□□ 2.27
CHRNA7-204ENST00000635722 PKD1L3Q7Z443 1732 aa29.2■■■□□ 2.26
CHRNA7-204ENST00000635722 INSRP06213 1382 aa29.19■■■□□ 2.26
CHRNA7-204ENST00000635722 MSL1Q68DK7 614 aa29.19■■■□□ 2.26
CHRNA7-204ENST00000635722 RAPGEF4Q8WZA2 1011 aa29.19■■■□□ 2.26
CHRNA7-204ENST00000635722 ITGB4P16144 1822 aa29.19■■■□□ 2.26
CHRNA7-204ENST00000635722 FLT4P35916 1363 aa29.18■■■□□ 2.26
CHRNA7-204ENST00000635722 COL23A1Q86Y22 540 aaPredicted RBP29.18■■■□□ 2.26
CHRNA7-204ENST00000635722 ANKRD26Q9UPS8 1709 aa29.17■■■□□ 2.26
CHRNA7-204ENST00000635722 MSH5O43196 834 aa29.17■■■□□ 2.26
CHRNA7-204ENST00000635722 NSD3Q9BZ95 1437 aa29.16■■■□□ 2.26
CHRNA7-204ENST00000635722 CGNL1Q0VF96 1302 aa29.16■■■□□ 2.26
CHRNA7-204ENST00000635722 TATP17735 454 aaPredicted RBP29.15■■■□□ 2.26
CHRNA7-204ENST00000635722 CARD14Q9BXL6 1004 aa29.15■■■□□ 2.26
CHRNA7-204ENST00000635722 EMILIN1Q9Y6C2 1016 aa29.15■■■□□ 2.26
CHRNA7-204ENST00000635722 PCDH11XQ9BZA7 1347 aa29.15■■■□□ 2.26
CHRNA7-204ENST00000635722 PCDH11YQ9BZA8 1340 aa29.15■■■□□ 2.26
CHRNA7-204ENST00000635722 PALLDQ8WX93 1383 aa29.13■■■□□ 2.25
CHRNA7-204ENST00000635722 CYP27B1O15528 508 aa29.13■■■□□ 2.25
CHRNA7-204ENST00000635722 SLC24A1O60721 1099 aa29.13■■■□□ 2.25
CHRNA7-204ENST00000635722 C4BP0C0L5 1744 aa29.13■■■□□ 2.25
CHRNA7-204ENST00000635722 YBX3P16989 372 aaKnown RBP eCLIP29.12■■■□□ 2.25
CHRNA7-204ENST00000635722 AMIGO3Q86WK7 504 aa29.11■■■□□ 2.25
CHRNA7-204ENST00000635722 MPRIPQ6WCQ1 1025 aa29.1■■■□□ 2.25
CHRNA7-204ENST00000635722 NCAPD2Q15021 1401 aa29.1■■■□□ 2.25
CHRNA7-204ENST00000635722 UBR3Q6ZT12 1888 aa29.08■■■□□ 2.25
CHRNA7-204ENST00000635722 SMIM5Q71RC9 77 aa29.08■■■□□ 2.25
CHRNA7-204ENST00000635722 KIF24Q5T7B8 1368 aa29.08■■■□□ 2.25
CHRNA7-204ENST00000635722 MAP2P11137 1827 aaKnown RBP29.06■■■□□ 2.24
CHRNA7-204ENST00000635722 SENP3-EIF4A1A0A087X0R7 540 aa29.06■■■□□ 2.24
CHRNA7-204ENST00000635722 C1QTNF8P60827 252 aa29.06■■■□□ 2.24
CHRNA7-204ENST00000635722 PPM1GO15355 546 aaPredicted RBP29.04■■■□□ 2.24
CHRNA7-204ENST00000635722 CEP350Q5VT06 3117 aa29.03■■■□□ 2.24
CHRNA7-204ENST00000635722 CDCA8Q53HL2 280 aa29.01■■■□□ 2.23
CHRNA7-204ENST00000635722 PIGBQ92521 554 aa29■■■□□ 2.23
CHRNA7-204ENST00000635722 PHF14O94880 888 aa28.98■■■□□ 2.23
CHRNA7-204ENST00000635722 AK7Q96M32 723 aa28.97■■■□□ 2.23
CHRNA7-204ENST00000635722 GIGYF1O75420 1035 aaPredicted RBP28.96■■■□□ 2.23
CHRNA7-204ENST00000635722 EYA1Q99502 592 aa28.96■■■□□ 2.23
CHRNA7-204ENST00000635722 TRIM26Q12899 539 aaPredicted RBP28.95■■■□□ 2.22
CHRNA7-204ENST00000635722 LINC00116Q8NCU8 138 aa28.95■■■□□ 2.22
CHRNA7-204ENST00000635722 WWC3Q9ULE0 1092 aa28.95■■■□□ 2.22
CHRNA7-204ENST00000635722 NKX1-1Q15270 411 aaPredicted RBP28.94■■■□□ 2.22
CHRNA7-204ENST00000635722 SMARCC1Q92922 1105 aaPredicted RBP28.94■■■□□ 2.22
CHRNA7-204ENST00000635722 WASHC2AQ641Q2 1341 aa28.94■■■□□ 2.22
CHRNA7-204ENST00000635722 ATP10DQ9P241 1426 aa28.93■■■□□ 2.22
CHRNA7-204ENST00000635722 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.92■■■□□ 2.22
CHRNA7-204ENST00000635722 GRIN3BO60391 1043 aa28.91■■■□□ 2.22
CHRNA7-204ENST00000635722 ITPK1Q13572 414 aa28.91■■■□□ 2.22
CHRNA7-204ENST00000635722 FLAD1Q8NFF5 587 aa28.91■■■□□ 2.22
CHRNA7-204ENST00000635722 POLR3GLQ9BT43 218 aa28.91■■■□□ 2.22
CHRNA7-204ENST00000635722 POLKQ9UBT6 870 aa28.91■■■□□ 2.22
CHRNA7-204ENST00000635722 ASAP1Q9ULH1 1129 aa28.91■■■□□ 2.22
CHRNA7-204ENST00000635722 SPG7Q9UQ90 795 aa28.91■■■□□ 2.22
CHRNA7-204ENST00000635722 CD2APQ9Y5K6 639 aa28.91■■■□□ 2.22
CHRNA7-204ENST00000635722 LOC102724428A0A0B4J2F2 783 aa28.9■■■□□ 2.22
CHRNA7-204ENST00000635722 TNNT2P45379 298 aaPredicted RBP28.9■■■□□ 2.22
CHRNA7-204ENST00000635722 SIK1P57059 783 aa28.9■■■□□ 2.22
CHRNA7-204ENST00000635722 TMOD3Q9NYL9 352 aa28.88■■■□□ 2.21
CHRNA7-204ENST00000635722 PHKG2P15735 406 aa28.87■■■□□ 2.21
CHRNA7-204ENST00000635722 EIF4A2Q14240 407 aaKnown RBP28.87■■■□□ 2.21
CHRNA7-204ENST00000635722 IGSF1Q8N6C5 1336 aa28.86■■■□□ 2.21
CHRNA7-204ENST00000635722 ADCY9O60503 1353 aa28.86■■■□□ 2.21
CHRNA7-204ENST00000635722 GNPATO15228 680 aa28.85■■■□□ 2.21
CHRNA7-204ENST00000635722 KIAA1551Q9HCM1 1747 aa28.84■■■□□ 2.21
CHRNA7-204ENST00000635722 SSFA2P28290 1259 aa28.84■■■□□ 2.21
CHRNA7-204ENST00000635722 KDRP35968 1356 aa28.84■■■□□ 2.21
CHRNA7-204ENST00000635722 ATG3Q9NT62 314 aa28.83■■■□□ 2.21
CHRNA7-204ENST00000635722 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.83■■■□□ 2.21
CHRNA7-204ENST00000635722 IFNL2Q8IZJ0 200 aa28.82■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms