RNA–Protein interactions for RNA: ENST00000635120.1

CSMD1-218, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CSMD1, Length 11,737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-218ENST00000635120 CAMK4Q16566 473 aa10.69□□□□□ -0.7
CSMD1-218ENST00000635120 EIF5P55010 431 aaKnown RBP10.69□□□□□ -0.7
CSMD1-218ENST00000635120 MVPQ14764 893 aaKnown RBP10.69□□□□□ -0.7
CSMD1-218ENST00000635120 MAP3K11Q16584 847 aa10.69□□□□□ -0.7
CSMD1-218ENST00000635120 CASKIN1Q8WXD9 1431 aa10.69□□□□□ -0.7
CSMD1-218ENST00000635120 SOGA3Q5TF21 947 aa10.69□□□□□ -0.7
CSMD1-218ENST00000635120 SLC26A8Q96RN1 970 aa10.69□□□□□ -0.7
CSMD1-218ENST00000635120 C9orf84Q5VXU9 1444 aa10.69□□□□□ -0.7
CSMD1-218ENST00000635120 DYDC1Q8WWB3 177 aa10.69□□□□□ -0.7
CSMD1-218ENST00000635120 CFAP100Q494V2 611 aa10.68□□□□□ -0.7
CSMD1-218ENST00000635120 RAD54L2Q9Y4B4 1467 aa10.68□□□□□ -0.7
CSMD1-218ENST00000635120 ERBINQ96RT1 1412 aa10.68□□□□□ -0.7
CSMD1-218ENST00000635120 PDCL2Q8N4E4 241 aa10.68□□□□□ -0.7
CSMD1-218ENST00000635120 TAF4BQ92750 862 aa10.68□□□□□ -0.7
CSMD1-218ENST00000635120 DDX11Q96FC9 970 aa10.68□□□□□ -0.7
CSMD1-218ENST00000635120 MCM4P33991 863 aa10.68□□□□□ -0.7
CSMD1-218ENST00000635120 RBM25P49756 843 aaKnown RBP10.68□□□□□ -0.7
CSMD1-218ENST00000635120 CCDC57Q2TAC2 916 aa10.68□□□□□ -0.7
CSMD1-218ENST00000635120 CCDC148Q8NFR7 591 aa10.68□□□□□ -0.7
CSMD1-218ENST00000635120 RBM5P52756 815 aaKnown RBP eCLIP10.68□□□□□ -0.7
CSMD1-218ENST00000635120 SULT6B1Q6IMI4 303 aa10.68□□□□□ -0.7
CSMD1-218ENST00000635120 ZNF530Q6P9A1 599 aaPredicted RBP10.68□□□□□ -0.7
CSMD1-218ENST00000635120 ATAD2BQ9ULI0 1458 aa10.68□□□□□ -0.7
CSMD1-218ENST00000635120 JAKMIP3Q5VZ66 844 aa10.67□□□□□ -0.7
CSMD1-218ENST00000635120 UBXN4Q92575 508 aa10.67□□□□□ -0.7
CSMD1-218ENST00000635120 CIZ1Q9ULV3 898 aaPredicted RBP10.67□□□□□ -0.7
CSMD1-218ENST00000635120 SFPQP23246 707 aaKnown RBP eCLIP10.67□□□□□ -0.7
CSMD1-218ENST00000635120 ATF7IPQ6VMQ6 1270 aa10.67□□□□□ -0.7
CSMD1-218ENST00000635120 BMP2KQ9NSY1 1161 aaPredicted RBP10.67□□□□□ -0.7
CSMD1-218ENST00000635120 PRAM1Q96QH2 718 aa10.67□□□□□ -0.7
CSMD1-218ENST00000635120 ESCO1Q5FWF5 840 aa10.67□□□□□ -0.7
CSMD1-218ENST00000635120 CYB5RLQ6IPT4 315 aa10.67□□□□□ -0.7
CSMD1-218ENST00000635120 SRGAP3O43295 1099 aa10.67□□□□□ -0.7
CSMD1-218ENST00000635120 CRACR2AQ9BSW2 395 aa10.67□□□□□ -0.7
CSMD1-218ENST00000635120 PPP6R1Q9UPN7 881 aa10.67□□□□□ -0.7
CSMD1-218ENST00000635120 SMTNL1A8MU46 457 aa10.66□□□□□ -0.7
CSMD1-218ENST00000635120 ZNF397Q8NF99 534 aaPredicted RBP10.66□□□□□ -0.7
CSMD1-218ENST00000635120 CABP4P57796 275 aa10.66□□□□□ -0.7
CSMD1-218ENST00000635120 TMCO3Q6UWJ1 677 aa10.66□□□□□ -0.7
CSMD1-218ENST00000635120 STAC3Q96MF2 364 aa10.66□□□□□ -0.7
CSMD1-218ENST00000635120 DESP17661 470 aa10.66□□□□□ -0.7
CSMD1-218ENST00000635120 CCDC91Q7Z6B0 441 aa10.66□□□□□ -0.7
CSMD1-218ENST00000635120 ZSCAN31Q96LW9 406 aaPredicted RBP10.66□□□□□ -0.7
CSMD1-218ENST00000635120 GOLGA6L10A0A0M3HER8 536 aa10.65□□□□□ -0.7
CSMD1-218ENST00000635120 MAP9Q49MG5 647 aa10.65□□□□□ -0.7
CSMD1-218ENST00000635120 ZSCAN25Q6NSZ9 544 aa10.65□□□□□ -0.7
CSMD1-218ENST00000635120 PPP1R1BQ9UD71 204 aaPredicted RBP10.65□□□□□ -0.7
CSMD1-218ENST00000635120 CTNNA3Q9UI47 895 aa10.65□□□□□ -0.7
CSMD1-218ENST00000635120 KRT32Q14532 448 aa10.65□□□□□ -0.7
CSMD1-218ENST00000635120 ZNF76P36508 570 aa10.65□□□□□ -0.7
CSMD1-218ENST00000635120 KIF2AO00139 706 aaPredicted RBP10.65□□□□□ -0.7
CSMD1-218ENST00000635120 KLHL10Q6JEL2 608 aa10.65□□□□□ -0.7
CSMD1-218ENST00000635120 WASF1Q92558 559 aa10.65□□□□□ -0.7
CSMD1-218ENST00000635120 TIAM1Q13009 1591 aa10.65□□□□□ -0.7
CSMD1-218ENST00000635120 CCDC113Q9H0I3 377 aa10.65□□□□□ -0.7
CSMD1-218ENST00000635120 TATP17735 454 aaPredicted RBP10.65□□□□□ -0.71
CSMD1-218ENST00000635120 CASQ1P31415 396 aa10.64□□□□□ -0.71
CSMD1-218ENST00000635120 WDR63Q8IWG1 891 aa10.64□□□□□ -0.71
CSMD1-218ENST00000635120 SPA17Q15506 151 aa10.64□□□□□ -0.71
CSMD1-218ENST00000635120 ZSCAN30Q86W11 494 aa10.64□□□□□ -0.71
CSMD1-218ENST00000635120 GOLGA4Q13439 2230 aaKnown RBP10.64□□□□□ -0.71
CSMD1-218ENST00000635120 CFAP70Q5T0N1 1121 aa10.64□□□□□ -0.71
CSMD1-218ENST00000635120 PTPN23Q9H3S7 1636 aa10.64□□□□□ -0.71
CSMD1-218ENST00000635120 CCDC183Q5T5S1 534 aa10.64□□□□□ -0.71
CSMD1-218ENST00000635120 PHF23Q9BUL5 403 aaPredicted RBP10.64□□□□□ -0.71
CSMD1-218ENST00000635120 FAM135AQ9P2D6 1515 aa10.64□□□□□ -0.71
CSMD1-218ENST00000635120 NEBLO76041 1014 aa10.64□□□□□ -0.71
CSMD1-218ENST00000635120 PTPN14Q15678 1187 aa10.64□□□□□ -0.71
CSMD1-218ENST00000635120 CEP131Q9UPN4 1083 aa10.64□□□□□ -0.71
CSMD1-218ENST00000635120 IMMTQ16891 758 aaKnown RBP10.64□□□□□ -0.71
CSMD1-218ENST00000635120 GIMAP7Q8NHV1 300 aa10.64□□□□□ -0.71
CSMD1-218ENST00000635120 EFCAB5A4FU69 1503 aa10.64□□□□□ -0.71
CSMD1-218ENST00000635120 SEC63Q9UGP8 760 aaKnown RBP10.64□□□□□ -0.71
CSMD1-218ENST00000635120 POLA1P09884 1462 aaPredicted RBP10.63□□□□□ -0.71
CSMD1-218ENST00000635120 SHTN1A0MZ66 631 aa10.63□□□□□ -0.71
CSMD1-218ENST00000635120 PPP1R12BO60237 982 aaPredicted RBP10.63□□□□□ -0.71
CSMD1-218ENST00000635120 IBSPP21815 317 aaPredicted RBP10.63□□□□□ -0.71
CSMD1-218ENST00000635120 LUZP1Q86V48 1076 aa10.63□□□□□ -0.71
CSMD1-218ENST00000635120 CDK19Q9BWU1 502 aa10.63□□□□□ -0.71
CSMD1-218ENST00000635120 FAM69CQ0P6D2 419 aa10.63□□□□□ -0.71
CSMD1-218ENST00000635120 KIF18AQ8NI77 898 aa10.63□□□□□ -0.71
CSMD1-218ENST00000635120 SYNJ1O43426 1573 aa10.63□□□□□ -0.71
CSMD1-218ENST00000635120 KIF5CO60282 957 aa10.63□□□□□ -0.71
CSMD1-218ENST00000635120 RAI14Q9P0K7 980 aa10.63□□□□□ -0.71
CSMD1-218ENST00000635120 FERMT3Q86UX7 667 aa10.63□□□□□ -0.71
CSMD1-218ENST00000635120 TRERF1Q96PN7 1200 aa10.63□□□□□ -0.71
CSMD1-218ENST00000635120 LRP2BPQ9P2M1 347 aa10.63□□□□□ -0.71
CSMD1-218ENST00000635120 GOPCQ9HD26 462 aa10.63□□□□□ -0.71
CSMD1-218ENST00000635120 USP5P45974 858 aa10.63□□□□□ -0.71
CSMD1-218ENST00000635120 SYNJ2O15056 1496 aa10.63□□□□□ -0.71
CSMD1-218ENST00000635120 BTBD11A6QL63 1104 aa10.63□□□□□ -0.71
CSMD1-218ENST00000635120 POTEJP0CG39 1038 aa10.63□□□□□ -0.71
CSMD1-218ENST00000635120 U3KPZ7 1027 aaPredicted RBP10.63□□□□□ -0.71
CSMD1-218ENST00000635120 MPHOSPH10O00566 681 aaKnown RBP10.62□□□□□ -0.71
CSMD1-218ENST00000635120 ANAPC15P60006 121 aa10.62□□□□□ -0.71
CSMD1-218ENST00000635120 NBPF1Q3BBV0 1214 aa10.62□□□□□ -0.71
CSMD1-218ENST00000635120 DNA2P51530 1060 aa10.62□□□□□ -0.71
CSMD1-218ENST00000635120 ZNF526Q8TF50 670 aaPredicted RBP10.62□□□□□ -0.71
CSMD1-218ENST00000635120 MAP2K1Q02750 393 aaPredicted RBP10.62□□□□□ -0.71
CSMD1-218ENST00000635120 IFFO1Q0D2I5 559 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms