RNA–Protein interactions for RNA: ENST00000634925.1

SMARCA2-230, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 1,582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-230ENST00000634925 RIPK4P57078 832 aa14.71□□□□□ -0.05
SMARCA2-230ENST00000634925 VPS72Q15906 364 aa14.71□□□□□ -0.05
SMARCA2-230ENST00000634925 CCDC9Q9Y3X0 531 aaKnown RBP14.71□□□□□ -0.05
SMARCA2-230ENST00000634925 ZBED9Q6R2W3 1325 aa14.71□□□□□ -0.06
SMARCA2-230ENST00000634925 SHANK3Q9BYB0 1731 aa14.7□□□□□ -0.06
SMARCA2-230ENST00000634925 IL2RBP14784 551 aa14.69□□□□□ -0.06
SMARCA2-230ENST00000634925 PLEKHO1Q53GL0 409 aaPredicted RBP14.69□□□□□ -0.06
SMARCA2-230ENST00000634925 TRIM35Q9UPQ4 493 aa14.69□□□□□ -0.06
SMARCA2-230ENST00000634925 OVOS2A0A0G2JMS6 1433 aa14.69□□□□□ -0.06
SMARCA2-230ENST00000634925 DISP2A7MBM2 1401 aa14.69□□□□□ -0.06
SMARCA2-230ENST00000634925 GAS2L2Q8NHY3 880 aa14.68□□□□□ -0.06
SMARCA2-230ENST00000634925 PHF23Q9BUL5 403 aaPredicted RBP14.68□□□□□ -0.06
SMARCA2-230ENST00000634925 AMOTQ4VCS5 1084 aa14.68□□□□□ -0.06
SMARCA2-230ENST00000634925 ILDR1Q86SU0 546 aaPredicted RBP14.68□□□□□ -0.06
SMARCA2-230ENST00000634925 WWC1Q8IX03 1113 aa14.68□□□□□ -0.06
SMARCA2-230ENST00000634925 THRAP3Q9Y2W1 955 aaKnown RBP14.68□□□□□ -0.06
SMARCA2-230ENST00000634925 ZNF521Q96K83 1311 aa14.68□□□□□ -0.06
SMARCA2-230ENST00000634925 ATRNO75882 1429 aa14.67□□□□□ -0.06
SMARCA2-230ENST00000634925 GLI3P10071 1580 aa14.67□□□□□ -0.06
SMARCA2-230ENST00000634925 CCDC27Q2M243 656 aa14.67□□□□□ -0.06
SMARCA2-230ENST00000634925 NCBP3Q53F19 620 aaKnown RBP14.67□□□□□ -0.06
SMARCA2-230ENST00000634925 ZNF530Q6P9A1 599 aaPredicted RBP14.67□□□□□ -0.06
SMARCA2-230ENST00000634925 NGEFQ8N5V2 710 aa14.67□□□□□ -0.06
SMARCA2-230ENST00000634925 KAT6BQ8WYB5 2073 aa14.66□□□□□ -0.06
SMARCA2-230ENST00000634925 ZCRB1Q8TBF4 217 aaKnown RBP14.66□□□□□ -0.06
SMARCA2-230ENST00000634925 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.66□□□□□ -0.062e-8■■■■□ 21
SMARCA2-230ENST00000634925 PLEKHG2Q9H7P9 1386 aa14.66□□□□□ -0.06
SMARCA2-230ENST00000634925 DCTN1Q14203 1278 aa14.65□□□□□ -0.06
SMARCA2-230ENST00000634925 BARGINQ6ZT62 677 aa14.65□□□□□ -0.06
SMARCA2-230ENST00000634925 QTRT2Q9H974 415 aaKnown RBP14.65□□□□□ -0.06
SMARCA2-230ENST00000634925 TRPC5Q9UL62 973 aaPredicted RBP14.65□□□□□ -0.06
SMARCA2-230ENST00000634925 SPG7Q9UQ90 795 aa14.65□□□□□ -0.06
SMARCA2-230ENST00000634925 GNAT3A8MTJ3 354 aa14.64□□□□□ -0.07
SMARCA2-230ENST00000634925 CYP27B1O15528 508 aa14.64□□□□□ -0.07
SMARCA2-230ENST00000634925 FAM98CQ17RN3 349 aaKnown RBP14.64□□□□□ -0.07
SMARCA2-230ENST00000634925 GJD4Q96KN9 370 aaPredicted RBP14.64□□□□□ -0.07
SMARCA2-230ENST00000634925 THUMPD2Q9BTF0 503 aaKnown RBP14.64□□□□□ -0.07
SMARCA2-230ENST00000634925 LRRC37A3O60309 1634 aa14.64□□□□□ -0.07
SMARCA2-230ENST00000634925 MAP3K5Q99683 1374 aa14.64□□□□□ -0.07
SMARCA2-230ENST00000634925 AKAP4Q5JQC9 854 aa14.64□□□□□ -0.07
SMARCA2-230ENST00000634925 MCM10Q7L590 875 aa14.64□□□□□ -0.07
SMARCA2-230ENST00000634925 CDCA7LQ96GN5 454 aa14.64□□□□□ -0.07
SMARCA2-230ENST00000634925 SCN11AQ9UI33 1791 aa14.64□□□□□ -0.07
SMARCA2-230ENST00000634925 PHKG2P15735 406 aa14.63□□□□□ -0.07
SMARCA2-230ENST00000634925 C1orf141Q5JVX7 400 aa14.63□□□□□ -0.07
SMARCA2-230ENST00000634925 CDCA7Q9BWT1 371 aaPredicted RBP14.63□□□□□ -0.07
SMARCA2-230ENST00000634925 SPINK5Q9NQ38 1064 aaPredicted RBP14.63□□□□□ -0.07
SMARCA2-230ENST00000634925 THSD7AQ9UPZ6 1657 aa14.62□□□□□ -0.07
SMARCA2-230ENST00000634925 LMOD3Q0VAK6 560 aa14.62□□□□□ -0.07
SMARCA2-230ENST00000634925 MPRIPQ6WCQ1 1025 aa14.62□□□□□ -0.07
SMARCA2-230ENST00000634925 IFNL2Q8IZJ0 200 aa14.62□□□□□ -0.07
SMARCA2-230ENST00000634925 IL17REQ8NFR9 667 aa14.62□□□□□ -0.07
SMARCA2-230ENST00000634925 DDX54Q8TDD1 881 aaKnown RBP14.62□□□□□ -0.07
SMARCA2-230ENST00000634925 ADAMTS7Q9UKP4 1686 aa14.62□□□□□ -0.07
SMARCA2-230ENST00000634925 PCDH11XQ9BZA7 1347 aa14.61□□□□□ -0.07
SMARCA2-230ENST00000634925 PCDH11YQ9BZA8 1340 aa14.61□□□□□ -0.07
SMARCA2-230ENST00000634925 EXOC5O00471 708 aa14.61□□□□□ -0.07
SMARCA2-230ENST00000634925 HTATSF1O43719 755 aaKnown RBP14.61□□□□□ -0.07
SMARCA2-230ENST00000634925 GOLGA2Q08379 1002 aa14.61□□□□□ -0.07
SMARCA2-230ENST00000634925 ZNF772Q68DY9 489 aaPredicted RBP14.61□□□□□ -0.07
SMARCA2-230ENST00000634925 WDR63Q8IWG1 891 aa14.61□□□□□ -0.07
SMARCA2-230ENST00000634925 RTF1Q92541 710 aaKnown RBP14.61□□□□□ -0.07
SMARCA2-230ENST00000634925 LGR6Q9HBX8 967 aa14.61□□□□□ -0.07
SMARCA2-230ENST00000634925 RGS17Q9UGC6 210 aaPredicted RBP14.61□□□□□ -0.07
SMARCA2-230ENST00000634925 TNS2Q63HR2 1409 aa14.61□□□□□ -0.07
SMARCA2-230ENST00000634925 DDB1Q16531 1140 aa14.6□□□□□ -0.07
SMARCA2-230ENST00000634925 SIPA1L3O60292 1781 aaPredicted RBP14.6□□□□□ -0.07
SMARCA2-230ENST00000634925 KDM6AO15550 1401 aaPredicted RBP14.59□□□□□ -0.07
SMARCA2-230ENST00000634925 CEMIPQ8WUJ3 1361 aa14.59□□□□□ -0.07
SMARCA2-230ENST00000634925 BRWD3Q6RI45 1802 aa14.59□□□□□ -0.07
SMARCA2-230ENST00000634925 RNMTO43148 476 aaKnown RBP14.59□□□□□ -0.07
SMARCA2-230ENST00000634925 PDE3BQ13370 1112 aa14.59□□□□□ -0.07
SMARCA2-230ENST00000634925 TOGARAM1Q9Y4F4 1720 aa14.58□□□□□ -0.08
SMARCA2-230ENST00000634925 A0A0G2JS52 829 aa14.58□□□□□ -0.08
SMARCA2-230ENST00000634925 ONECUT3O60422 494 aaPredicted RBP14.58□□□□□ -0.08
SMARCA2-230ENST00000634925 MYT1Q01538 1121 aa14.58□□□□□ -0.08
SMARCA2-230ENST00000634925 SLFN5Q08AF3 891 aa14.58□□□□□ -0.08
SMARCA2-230ENST00000634925 ITGB4P16144 1822 aa14.57□□□□□ -0.08
SMARCA2-230ENST00000634925 NKX1-1Q15270 411 aaPredicted RBP14.57□□□□□ -0.08
SMARCA2-230ENST00000634925 IL16Q14005 1332 aa14.57□□□□□ -0.08
SMARCA2-230ENST00000634925 E9PSI1 815 aa14.56□□□□□ -0.08
SMARCA2-230ENST00000634925 RBM6P78332 1123 aaKnown RBP14.56□□□□□ -0.08
SMARCA2-230ENST00000634925 TRMT2AQ8IZ69 625 aaKnown RBP14.56□□□□□ -0.08
SMARCA2-230ENST00000634925 MARCH10Q8NA82 808 aaPredicted RBP14.56□□□□□ -0.08
SMARCA2-230ENST00000634925 DCAF5Q96JK2 942 aa14.56□□□□□ -0.08
SMARCA2-230ENST00000634925 LAS1LQ9Y4W2 734 aaKnown RBP14.56□□□□□ -0.08
SMARCA2-230ENST00000634925 HSP90AB1P08238 724 aaKnown RBP14.56□□□□□ -0.08
SMARCA2-230ENST00000634925 ZNF853P0CG23 659 aa14.56□□□□□ -0.08
SMARCA2-230ENST00000634925 DUSP27Q5VZP5 1158 aa14.56□□□□□ -0.08
SMARCA2-230ENST00000634925 POTEAQ6S8J7 498 aa14.56□□□□□ -0.08
SMARCA2-230ENST00000634925 SEPT12Q8IYM1 358 aa14.56□□□□□ -0.08
SMARCA2-230ENST00000634925 CALD1Q05682 793 aaKnown RBP14.55□□□□□ -0.08
SMARCA2-230ENST00000634925 TSR2Q969E8 191 aaKnown RBP14.55□□□□□ -0.08
SMARCA2-230ENST00000634925 CFAP44Q96MT7 982 aa14.55□□□□□ -0.08
SMARCA2-230ENST00000634925 IFT57Q9NWB7 429 aa14.55□□□□□ -0.08
SMARCA2-230ENST00000634925 MIS18AQ9NYP9 233 aa14.55□□□□□ -0.08
SMARCA2-230ENST00000634925 DOT1LQ8TEK3 1739 aa14.55□□□□□ -0.08
SMARCA2-230ENST00000634925 GNAI1P63096 354 aa14.54□□□□□ -0.08
SMARCA2-230ENST00000634925 TEFQ10587 303 aa14.54□□□□□ -0.08
SMARCA2-230ENST00000634925 KDM3BQ7LBC6 1761 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms