RNA–Protein interactions for RNA: ENST00000634435.1

SMARCA2-223, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-223	ENST00000634435	POLR1A	O95602	1720 aa	Predicted RBP	10.21	□□□□□ -0.77
SMARCA2-223	ENST00000634435	GUCA2A	Q02747	115 aa		10.21	□□□□□ -0.77
SMARCA2-223	ENST00000634435	CTDSPL2	Q05D32	466 aa		10.21	□□□□□ -0.77
SMARCA2-223	ENST00000634435	IRF5	Q13568	498 aa		10.21	□□□□□ -0.77
SMARCA2-223	ENST00000634435	THEMIS	Q8N1K5	641 aa	Predicted RBP	10.21	□□□□□ -0.77
SMARCA2-223	ENST00000634435	KCTD17	Q8N5Z5	321 aa		10.21	□□□□□ -0.77
SMARCA2-223	ENST00000634435	SEPT9	Q9UHD8	586 aa	Predicted RBP	10.21	□□□□□ -0.77
SMARCA2-223	ENST00000634435	MIA2	Q96PC5	1412 aa		10.21	□□□□□ -0.78
SMARCA2-223	ENST00000634435	UGGT1	Q9NYU2	1555 aa		10.21	□□□□□ -0.78
SMARCA2-223	ENST00000634435	LAPTM4B	Q86VI4	370 aa		10.2	□□□□□ -0.78
SMARCA2-223	ENST00000634435	VWDE	Q8N2E2	1590 aa		10.2	□□□□□ -0.78
SMARCA2-223	ENST00000634435	NECTIN2	Q92692	538 aa		10.2	□□□□□ -0.78
SMARCA2-223	ENST00000634435	HLA-C	Q95604	372 aa		10.2	□□□□□ -0.78
SMARCA2-223	ENST00000634435	TRIM34	Q9BYJ4	488 aa		10.2	□□□□□ -0.78
SMARCA2-223	ENST00000634435	HCST	Q9UBK5	93 aa		10.2	□□□□□ -0.78
SMARCA2-223	ENST00000634435	NCOA2	Q15596	1464 aa		10.19	□□□□□ -0.78
SMARCA2-223	ENST00000634435	POTEE	Q6S8J3	1075 aa		10.19	□□□□□ -0.78
SMARCA2-223	ENST00000634435	HMX1	Q9NP08	348 aa	Predicted RBP	10.19	□□□□□ -0.78
SMARCA2-223	ENST00000634435	AXIN2	Q9Y2T1	843 aa		10.19	□□□□□ -0.78
SMARCA2-223	ENST00000634435	MED14	O60244	1454 aa		10.18	□□□□□ -0.78
SMARCA2-223	ENST00000634435	FUT2	Q10981	343 aa		10.18	□□□□□ -0.78
SMARCA2-223	ENST00000634435	RETREG2	Q8NC44	543 aa		10.18	□□□□□ -0.78
SMARCA2-223	ENST00000634435	CFAP99	D6REC4	459 aa		10.17	□□□□□ -0.78
SMARCA2-223	ENST00000634435	C6orf229	H3BNL8	230 aa		10.17	□□□□□ -0.78
SMARCA2-223	ENST00000634435	GPR37L1	O60883	481 aa		10.17	□□□□□ -0.78
SMARCA2-223	ENST00000634435	CFH	P08603	1231 aa		10.17	□□□□□ -0.78
SMARCA2-223	ENST00000634435	TSPY4	P0CV99	314 aa		10.17	□□□□□ -0.78
SMARCA2-223	ENST00000634435	TSPY10	P0CW01	314 aa		10.17	□□□□□ -0.78
SMARCA2-223	ENST00000634435	PDE4C	Q08493	712 aa		10.17	□□□□□ -0.78
SMARCA2-223	ENST00000634435	DEPDC5	O75140	1603 aa		10.17	□□□□□ -0.78
SMARCA2-223	ENST00000634435	ATP6V1A	P38606	617 aa		10.16	□□□□□ -0.78
SMARCA2-223	ENST00000634435	NBPF3	Q9H094	633 aa		10.16	□□□□□ -0.78
SMARCA2-223	ENST00000634435	VPS9D1	Q9Y2B5	631 aa		10.16	□□□□□ -0.78
SMARCA2-223	ENST00000634435	ABCC3	O15438	1527 aa		10.16	□□□□□ -0.78
SMARCA2-223	ENST00000634435	IQGAP1	P46940	1657 aa		10.15	□□□□□ -0.78
SMARCA2-223	ENST00000634435	RNF17	Q9BXT8	1623 aa	Known RBP	10.15	□□□□□ -0.78
SMARCA2-223	ENST00000634435	ALK	Q9UM73	1620 aa		10.15	□□□□□ -0.78
SMARCA2-223	ENST00000634435	ACIN1	Q9UKV3	1341 aa	Known RBP	10.15	□□□□□ -0.78
SMARCA2-223	ENST00000634435	SYNM	O15061	1565 aa		10.15	□□□□□ -0.78
SMARCA2-223	ENST00000634435	ARHGEF5	Q12774	1597 aa		10.15	□□□□□ -0.78
SMARCA2-223	ENST00000634435	HDGFL1	Q5TGJ6	251 aa		10.15	□□□□□ -0.78
SMARCA2-223	ENST00000634435	DMRTA1	Q5VZB9	504 aa		10.15	□□□□□ -0.78
SMARCA2-223	ENST00000634435	SAMD7	Q7Z3H4	446 aa		10.15	□□□□□ -0.78
SMARCA2-223	ENST00000634435	LRRN4	Q8WUT4	740 aa		10.15	□□□□□ -0.78
SMARCA2-223	ENST00000634435	TSC1	Q92574	1164 aa		10.15	□□□□□ -0.78
SMARCA2-223	ENST00000634435	CCDC9	Q9Y3X0	531 aa	Known RBP	10.15	□□□□□ -0.78
SMARCA2-223	ENST00000634435	ERVK-7	P63135	1459 aa		10.15	□□□□□ -0.78
SMARCA2-223	ENST00000634435	LRRC7	Q96NW7	1537 aa		10.14	□□□□□ -0.79
SMARCA2-223	ENST00000634435	KMT5B	Q4FZB7	885 aa		10.13	□□□□□ -0.79
SMARCA2-223	ENST00000634435	ADAMTS19	Q8TE59	1207 aa		10.13	□□□□□ -0.79
SMARCA2-223	ENST00000634435	PBXIP1	Q96AQ6	731 aa		10.13	□□□□□ -0.79
SMARCA2-223	ENST00000634435	SCAF11	Q99590	1463 aa	Known RBP	10.12	□□□□□ -0.79
SMARCA2-223	ENST00000634435	SOX11	P35716	441 aa		10.12	□□□□□ -0.79
SMARCA2-223	ENST00000634435	ADGRD1	Q6QNK2	874 aa		10.12	□□□□□ -0.79
SMARCA2-223	ENST00000634435	ZC3H13	Q5T200	1668 aa	Known RBP	10.12	□□□□□ -0.79
SMARCA2-223	ENST00000634435	RETREG3	Q86VR2	466 aa		10.11	□□□□□ -0.79
SMARCA2-223	ENST00000634435	PRR7	Q8TB68	274 aa		10.11	□□□□□ -0.79
SMARCA2-223	ENST00000634435	VAC14	Q08AM6	782 aa		10.1	□□□□□ -0.79
SMARCA2-223	ENST00000634435	DESI1	Q6ICB0	168 aa		10.1	□□□□□ -0.79
SMARCA2-223	ENST00000634435	EIF2AK4	Q9P2K8	1649 aa	Known RBP	10.1	□□□□□ -0.79
SMARCA2-223	ENST00000634435	MAST1	Q9Y2H9	1570 aa		10.09	□□□□□ -0.79
SMARCA2-223	ENST00000634435	MROH1	Q8NDA8	1641 aa		10.09	□□□□□ -0.79
SMARCA2-223	ENST00000634435	BHMG1	C9JSJ3	638 aa	Predicted RBP	10.09	□□□□□ -0.79
SMARCA2-223	ENST00000634435	RNF40	O75150	1001 aa		10.09	□□□□□ -0.79
SMARCA2-223	ENST00000634435		Q3C1V9	767 aa		10.09	□□□□□ -0.79
SMARCA2-223	ENST00000634435	ZFR	Q96KR1	1074 aa	Known RBP	10.09	□□□□□ -0.79
SMARCA2-223	ENST00000634435	ALG2	Q9H553	416 aa		10.09	□□□□□ -0.79
SMARCA2-223	ENST00000634435	LRRC9	Q6ZRR7	1453 aa		10.09	□□□□□ -0.79
SMARCA2-223	ENST00000634435	TK2	O00142	265 aa		10.08	□□□□□ -0.8
SMARCA2-223	ENST00000634435	ACTN4	O43707	911 aa	Known RBP	10.08	□□□□□ -0.8
SMARCA2-223	ENST00000634435	MORN1	Q5T089	497 aa		10.08	□□□□□ -0.8
SMARCA2-223	ENST00000634435	CFAP70	Q5T0N1	1121 aa		10.08	□□□□□ -0.8
SMARCA2-223	ENST00000634435	TXNDC2	Q86VQ3	553 aa		10.08	□□□□□ -0.8
SMARCA2-223	ENST00000634435	PNMA1	Q8ND90	353 aa		10.08	□□□□□ -0.8
SMARCA2-223	ENST00000634435	PRR14	Q9BWN1	585 aa		10.08	□□□□□ -0.8
SMARCA2-223	ENST00000634435	PPP1R12C	Q9BZL4	782 aa		10.08	□□□□□ -0.8
SMARCA2-223	ENST00000634435	EID1	Q9Y6B2	187 aa		10.08	□□□□□ -0.8
SMARCA2-223	ENST00000634435	STRCP1	A6NGW2	1772 aa		10.08	□□□□□ -0.8
SMARCA2-223	ENST00000634435	MYOM3	Q5VTT5	1437 aa		10.07	□□□□□ -0.8
SMARCA2-223	ENST00000634435	VPS8	Q8N3P4	1428 aa		10.07	□□□□□ -0.8
SMARCA2-223	ENST00000634435	SLIT1	O75093	1534 aa		10.07	□□□□□ -0.8
SMARCA2-223	ENST00000634435	DUOX2	Q9NRD8	1548 aa		10.07	□□□□□ -0.8
SMARCA2-223	ENST00000634435	ARHGAP23	Q9P227	1491 aa		10.07	□□□□□ -0.8
SMARCA2-223	ENST00000634435	KIF15	Q9NS87	1388 aa		10.07	□□□□□ -0.8
SMARCA2-223	ENST00000634435	LTK	P29376	864 aa		10.07	□□□□□ -0.8
SMARCA2-223	ENST00000634435	AEBP1	Q8IUX7	1158 aa		10.07	□□□□□ -0.8
SMARCA2-223	ENST00000634435	EPS8L1	Q8TE68	723 aa		10.07	□□□□□ -0.8
SMARCA2-223	ENST00000634435	SYMPK	Q92797	1274 aa	Known RBP	10.07	□□□□□ -0.8
SMARCA2-223	ENST00000634435	UST	Q9Y2C2	406 aa		10.06	□□□□□ -0.8
SMARCA2-223	ENST00000634435	UBR1	Q8IWV7	1749 aa		10.06	□□□□□ -0.8
SMARCA2-223	ENST00000634435	PRDM15	P57071	1507 aa	Predicted RBP	10.06	□□□□□ -0.8
SMARCA2-223	ENST00000634435	ARHGAP31	Q2M1Z3	1444 aa		10.06	□□□□□ -0.8
SMARCA2-223	ENST00000634435	ERBIN	Q96RT1	1412 aa		10.06	□□□□□ -0.8
SMARCA2-223	ENST00000634435	CEP152	O94986	1710 aa		10.05	□□□□□ -0.8
SMARCA2-223	ENST00000634435	TMEM2	Q9UHN6	1383 aa		10.05	□□□□□ -0.8
SMARCA2-223	ENST00000634435	SRPK2	P78362	688 aa	Known RBP	10.05	□□□□□ -0.8
SMARCA2-223	ENST00000634435	NR6A1	Q15406	480 aa		10.05	□□□□□ -0.8
SMARCA2-223	ENST00000634435	MRPL50	Q8N5N7	158 aa	Known RBP	10.05	□□□□□ -0.8
SMARCA2-223	ENST00000634435	LRCH3	Q96II8	777 aa		10.05	□□□□□ -0.8
SMARCA2-223	ENST00000634435	RGS17	Q9UGC6	210 aa	Predicted RBP	10.05	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms