RNA–Protein interactions for RNA: ENST00000633364.1

LIMS4-205, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best)

Gene LIMS4, Length 957 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-205ENST00000633364 KIF7Q2M1P5 1343 aa21.23■□□□□ 0.99
LIMS4-205ENST00000633364 WASHC2AQ641Q2 1341 aa21.23■□□□□ 0.99
LIMS4-205ENST00000633364 NSD2O96028 1365 aa21.23■□□□□ 0.99
LIMS4-205ENST00000633364 MAP2P11137 1827 aaKnown RBP21.22■□□□□ 0.99
LIMS4-205ENST00000633364 RGPD3A6NKT7 1758 aaPredicted RBP21.21■□□□□ 0.99
LIMS4-205ENST00000633364 RGPD4Q7Z3J3 1758 aa21.21■□□□□ 0.99
LIMS4-205ENST00000633364 MEGF6O75095 1541 aa21.21■□□□□ 0.99
LIMS4-205ENST00000633364 TXNRD1Q16881 649 aa21.21■□□□□ 0.99
LIMS4-205ENST00000633364 NHSQ6T4R5 1651 aa21.21■□□□□ 0.99
LIMS4-205ENST00000633364 ANKRD26Q9UPS8 1709 aa21.2■□□□□ 0.98
LIMS4-205ENST00000633364 PROM2Q8N271 834 aa21.18■□□□□ 0.98
LIMS4-205ENST00000633364 STK32BQ9NY57 414 aa21.18■□□□□ 0.98
LIMS4-205ENST00000633364 PRIM1P49642 420 aaKnown RBP21.17■□□□□ 0.98
LIMS4-205ENST00000633364 PCDH11XQ9BZA7 1347 aa21.17■□□□□ 0.98
LIMS4-205ENST00000633364 PCDH11YQ9BZA8 1340 aa21.17■□□□□ 0.98
LIMS4-205ENST00000633364 EYA1Q99502 592 aa21.15■□□□□ 0.98
LIMS4-205ENST00000633364 SPG7Q9UQ90 795 aa21.15■□□□□ 0.98
LIMS4-205ENST00000633364 LRP5O75197 1615 aa21.15■□□□□ 0.98
LIMS4-205ENST00000633364 BTAF1O14981 1849 aa21.14■□□□□ 0.97
LIMS4-205ENST00000633364 EIF4A2Q14240 407 aaKnown RBP21.14■□□□□ 0.97
LIMS4-205ENST00000633364 ANO8Q9HCE9 1232 aaPredicted RBP21.14■□□□□ 0.97
LIMS4-205ENST00000633364 SLC15A2Q16348 729 aa21.11■□□□□ 0.97
LIMS4-205ENST00000633364 SPON1Q9HCB6 807 aa21.11■□□□□ 0.97
LIMS4-205ENST00000633364 DOT1LQ8TEK3 1739 aa21.1■□□□□ 0.97
LIMS4-205ENST00000633364 SHANK3Q9BYB0 1731 aa21.1■□□□□ 0.97
LIMS4-205ENST00000633364 AMER1Q5JTC6 1135 aaPredicted RBP21.1■□□□□ 0.97
LIMS4-205ENST00000633364 CNGB1Q14028 1251 aaPredicted RBP21.09■□□□□ 0.97
LIMS4-205ENST00000633364 SLC27A3Q5K4L6 730 aa21.09■□□□□ 0.97
LIMS4-205ENST00000633364 PPP1R1BQ9UD71 204 aaPredicted RBP21.09■□□□□ 0.97
LIMS4-205ENST00000633364 CYP27B1O15528 508 aa21.08■□□□□ 0.97
LIMS4-205ENST00000633364 CC2D1BQ5T0F9 858 aaKnown RBP21.08■□□□□ 0.97
LIMS4-205ENST00000633364 MPRIPQ6WCQ1 1025 aa21.07■□□□□ 0.96
LIMS4-205ENST00000633364 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.07■□□□□ 0.96
LIMS4-205ENST00000633364 NCAPD2Q15021 1401 aa21.06■□□□□ 0.96
LIMS4-205ENST00000633364 IFNL2Q8IZJ0 200 aa21.05■□□□□ 0.96
LIMS4-205ENST00000633364 LRRC4BQ9NT99 713 aa21.05■□□□□ 0.96
LIMS4-205ENST00000633364 IGSF1Q8N6C5 1336 aa21.04■□□□□ 0.96
LIMS4-205ENST00000633364 PER1O15534 1290 aaPredicted RBP21.04■□□□□ 0.96
LIMS4-205ENST00000633364 ZBTB7AO95365 584 aa21.04■□□□□ 0.96
LIMS4-205ENST00000633364 CCNL1Q9UK58 526 aaPredicted RBP21.04■□□□□ 0.96
LIMS4-205ENST00000633364 PLEKHO1Q53GL0 409 aaPredicted RBP21.03■□□□□ 0.96
LIMS4-205ENST00000633364 PKD1L3Q7Z443 1732 aa21.03■□□□□ 0.96
LIMS4-205ENST00000633364 MTHFSP49914 203 aa21.02■□□□□ 0.96
LIMS4-205ENST00000633364 KCNQ4P56696 695 aa21.02■□□□□ 0.96
LIMS4-205ENST00000633364 PDGFDQ9GZP0 370 aaPredicted RBP21.02■□□□□ 0.96
LIMS4-205ENST00000633364 PHKG2P15735 406 aa21.01■□□□□ 0.95
LIMS4-205ENST00000633364 HMGB2P26583 209 aaKnown RBP21.01■□□□□ 0.95
LIMS4-205ENST00000633364 NKX1-1Q15270 411 aaPredicted RBP21.01■□□□□ 0.95
LIMS4-205ENST00000633364 ATF5Q9Y2D1 282 aaPredicted RBP21.01■□□□□ 0.95
LIMS4-205ENST00000633364 ZNF827Q17R98 1081 aa21■□□□□ 0.95
LIMS4-205ENST00000633364 AMOTQ4VCS5 1084 aa21■□□□□ 0.95
LIMS4-205ENST00000633364 SULT6B1Q6IMI4 303 aa21■□□□□ 0.95
LIMS4-205ENST00000633364 SMARCC1Q92922 1105 aaPredicted RBP21■□□□□ 0.95
LIMS4-205ENST00000633364 TMOD3Q9NYL9 352 aa21■□□□□ 0.95
LIMS4-205ENST00000633364 TFCP2L1Q9NZI6 479 aa21■□□□□ 0.95
LIMS4-205ENST00000633364 PLEKHG2Q9H7P9 1386 aa20.98■□□□□ 0.95
LIMS4-205ENST00000633364 HSP90AB1P08238 724 aaKnown RBP20.98■□□□□ 0.95
LIMS4-205ENST00000633364 IL13P35225 146 aa20.98■□□□□ 0.95
LIMS4-205ENST00000633364 MTFR1LQ9H019 292 aa20.98■□□□□ 0.95
LIMS4-205ENST00000633364 PALLDQ8WX93 1383 aa20.97■□□□□ 0.95
LIMS4-205ENST00000633364 C1orf141Q5JVX7 400 aa20.97■□□□□ 0.95
LIMS4-205ENST00000633364 ZNF530Q6P9A1 599 aaPredicted RBP20.97■□□□□ 0.95
LIMS4-205ENST00000633364 AEBP1Q8IUX7 1158 aa20.97■□□□□ 0.95
LIMS4-205ENST00000633364 PIGBQ92521 554 aa20.97■□□□□ 0.95
LIMS4-205ENST00000633364 AKT1S1Q96B36 256 aa20.97■□□□□ 0.95
LIMS4-205ENST00000633364 CASZ1Q86V15 1759 aa20.97■□□□□ 0.95
LIMS4-205ENST00000633364 MSH5O43196 834 aa20.96■□□□□ 0.95
LIMS4-205ENST00000633364 PAPPAQ13219 1627 aa20.96■□□□□ 0.95
LIMS4-205ENST00000633364 NPC1L1Q9UHC9 1359 aa20.96■□□□□ 0.95
LIMS4-205ENST00000633364 LY75O60449 1722 aa20.95■□□□□ 0.94
LIMS4-205ENST00000633364 DIAPH1O60610 1272 aaKnown RBP20.95■□□□□ 0.94
LIMS4-205ENST00000633364 DCAF5Q96JK2 942 aa20.94■□□□□ 0.94
LIMS4-205ENST00000633364 ITGB4P16144 1822 aa20.94■□□□□ 0.94
LIMS4-205ENST00000633364 DCAF8L1A6NGE4 600 aa20.93■□□□□ 0.94
LIMS4-205ENST00000633364 TOGARAM1Q9Y4F4 1720 aa20.92■□□□□ 0.94
LIMS4-205ENST00000633364 HMOX1P09601 288 aa20.92■□□□□ 0.94
LIMS4-205ENST00000633364 SLC16A10Q8TF71 515 aa20.92■□□□□ 0.94
LIMS4-205ENST00000633364 ERVV-2B6SEH9 535 aa20.91■□□□□ 0.94
LIMS4-205ENST00000633364 PNPLA7Q6ZV29 1317 aa20.91■□□□□ 0.94
LIMS4-205ENST00000633364 PTGER2P43116 358 aa20.9■□□□□ 0.94
LIMS4-205ENST00000633364 CABP4P57796 275 aa20.9■□□□□ 0.94
LIMS4-205ENST00000633364 ASAP1Q9ULH1 1129 aa20.9■□□□□ 0.94
LIMS4-205ENST00000633364 KDRP35968 1356 aa20.89■□□□□ 0.93
LIMS4-205ENST00000633364 U2SURPO15042 1029 aaKnown RBP20.89■□□□□ 0.93
LIMS4-205ENST00000633364 POLD1P28340 1107 aa20.89■□□□□ 0.93
LIMS4-205ENST00000633364 AK7Q96M32 723 aa20.89■□□□□ 0.93
LIMS4-205ENST00000633364 CFAP53Q96M91 514 aa20.89■□□□□ 0.93
LIMS4-205ENST00000633364 LOC102724428A0A0B4J2F2 783 aa20.88■□□□□ 0.93
LIMS4-205ENST00000633364 SIK1P57059 783 aa20.88■□□□□ 0.93
LIMS4-205ENST00000633364 ATP6V1AP38606 617 aa20.87■□□□□ 0.93
LIMS4-205ENST00000633364 FLAD1Q8NFF5 587 aa20.87■□□□□ 0.93
LIMS4-205ENST00000633364 ARXQ96QS3 562 aa20.87■□□□□ 0.93
LIMS4-205ENST00000633364 RBM42Q9BTD8 480 aaKnown RBP20.86■□□□□ 0.93
LIMS4-205ENST00000633364 ATG3Q9NT62 314 aa20.86■□□□□ 0.93
LIMS4-205ENST00000633364 C5P01031 1676 aa20.86■□□□□ 0.93
LIMS4-205ENST00000633364 QSER1Q2KHR3 1735 aa20.85■□□□□ 0.93
LIMS4-205ENST00000633364 AKAP4Q5JQC9 854 aa20.85■□□□□ 0.93
LIMS4-205ENST00000633364 COL23A1Q86Y22 540 aaPredicted RBP20.84■□□□□ 0.93
LIMS4-205ENST00000633364 KLHL34Q8N239 644 aa20.84■□□□□ 0.93
LIMS4-205ENST00000633364 SGIP1Q9BQI5 828 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms