RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 GIGYF1O75420 1035 aaPredicted RBP28.58■■■□□ 2.17
TARDBP-228ENST00000629725 KCNQ4P56696 695 aa28.58■■■□□ 2.17
TARDBP-228ENST00000629725 PRIM1P49642 420 aaKnown RBP28.57■■■□□ 2.16
TARDBP-228ENST00000629725 ANKRD36BQ8N2N9 1353 aa28.57■■■□□ 2.16
TARDBP-228ENST00000629725 NLGN2Q8NFZ4 835 aa28.55■■■□□ 2.16
TARDBP-228ENST00000629725 RGPD2P0DJD1 1756 aa28.52■■■□□ 2.16
TARDBP-228ENST00000629725 SHANK3Q9BYB0 1731 aa28.52■■■□□ 2.16
TARDBP-228ENST00000629725 NSD2O96028 1365 aa28.51■■■□□ 2.16
TARDBP-228ENST00000629725 PUS7Q96PZ0 661 aaKnown RBP28.51■■■□□ 2.15
TARDBP-228ENST00000629725 ZCRB1Q8TBF4 217 aaKnown RBP28.5■■■□□ 2.15
TARDBP-228ENST00000629725 CCNL1Q9UK58 526 aaPredicted RBP28.5■■■□□ 2.15
TARDBP-228ENST00000629725 MAP3K19Q56UN5 1328 aa28.49■■■□□ 2.15
TARDBP-228ENST00000629725 HOXC9P31274 260 aa28.49■■■□□ 2.15
TARDBP-228ENST00000629725 COG3Q96JB2 828 aa28.49■■■□□ 2.15
TARDBP-228ENST00000629725 MSH5O43196 834 aa28.48■■■□□ 2.15
TARDBP-228ENST00000629725 AMPHP49418 695 aa28.48■■■□□ 2.15
TARDBP-228ENST00000629725 GRIN3BO60391 1043 aa28.47■■■□□ 2.15
TARDBP-228ENST00000629725 MEGF6O75095 1541 aa28.46■■■□□ 2.15
TARDBP-228ENST00000629725 USP47Q96K76 1375 aa28.46■■■□□ 2.15
TARDBP-228ENST00000629725 YBX3P16989 372 aaKnown RBP eCLIP28.45■■■□□ 2.148e-13■□□□□ 8.1
TARDBP-228ENST00000629725 FBLN1P23142 703 aa28.44■■■□□ 2.14
TARDBP-228ENST00000629725 COL23A1Q86Y22 540 aaPredicted RBP28.44■■■□□ 2.14
TARDBP-228ENST00000629725 C5P01031 1676 aa28.4■■■□□ 2.14
TARDBP-228ENST00000629725 CGNL1Q0VF96 1302 aa28.4■■■□□ 2.14
TARDBP-228ENST00000629725 MSL1Q68DK7 614 aa28.39■■■□□ 2.14
TARDBP-228ENST00000629725 RTL1A6NKG5 1358 aa28.38■■■□□ 2.13
TARDBP-228ENST00000629725 NBPF6Q5VWK0 638 aa28.38■■■□□ 2.13
TARDBP-228ENST00000629725 NBPF4Q96M43 638 aa28.38■■■□□ 2.13
TARDBP-228ENST00000629725 RAPGEF4Q8WZA2 1011 aa28.36■■■□□ 2.13
TARDBP-228ENST00000629725 TAF1LQ8IZX4 1826 aa28.35■■■□□ 2.13
TARDBP-228ENST00000629725 HMGB2P26583 209 aaKnown RBP28.35■■■□□ 2.13
TARDBP-228ENST00000629725 RRS1Q15050 365 aaKnown RBP28.35■■■□□ 2.13
TARDBP-228ENST00000629725 USHBP1Q8N6Y0 703 aa28.35■■■□□ 2.13
TARDBP-228ENST00000629725 TESK2Q96S53 571 aa28.35■■■□□ 2.13
TARDBP-228ENST00000629725 SMG6Q86US8 1419 aaKnown RBP28.35■■■□□ 2.13
TARDBP-228ENST00000629725 IFFO2Q5TF58 517 aa28.34■■■□□ 2.13
TARDBP-228ENST00000629725 CD2APQ9Y5K6 639 aa28.34■■■□□ 2.13
TARDBP-228ENST00000629725 TONSLQ96HA7 1378 aa28.34■■■□□ 2.13
TARDBP-228ENST00000629725 ST20-MTHFSA0A0A6YYL1 179 aa28.33■■■□□ 2.13
TARDBP-228ENST00000629725 FLAD1Q8NFF5 587 aa28.33■■■□□ 2.13
TARDBP-228ENST00000629725 ATP10DQ9P241 1426 aa28.33■■■□□ 2.13
TARDBP-228ENST00000629725 SLC24A1O60721 1099 aa28.32■■■□□ 2.12
TARDBP-228ENST00000629725 TATP17735 454 aaPredicted RBP28.32■■■□□ 2.12
TARDBP-228ENST00000629725 PCDH11XQ9BZA7 1347 aa28.3■■■□□ 2.12
TARDBP-228ENST00000629725 PCDH11YQ9BZA8 1340 aa28.3■■■□□ 2.12
TARDBP-228ENST00000629725 PALLDQ8WX93 1383 aa28.29■■■□□ 2.12
TARDBP-228ENST00000629725 FYB1O15117 783 aa28.28■■■□□ 2.12
TARDBP-228ENST00000629725 MPRIPQ6WCQ1 1025 aa28.28■■■□□ 2.12
TARDBP-228ENST00000629725 GGNBP2Q9H3C7 697 aa28.28■■■□□ 2.12
TARDBP-228ENST00000629725 GPBP1L1Q9HC44 474 aaPredicted RBP28.28■■■□□ 2.12
TARDBP-228ENST00000629725 C4BP0C0L5 1744 aa28.26■■■□□ 2.12
TARDBP-228ENST00000629725 ITGB4P16144 1822 aa28.26■■■□□ 2.11
TARDBP-228ENST00000629725 INSRP06213 1382 aa28.24■■■□□ 2.11
TARDBP-228ENST00000629725 HSP90AB2PQ58FF8 381 aa28.24■■■□□ 2.11
TARDBP-228ENST00000629725 AK7Q96M32 723 aa28.23■■■□□ 2.11
TARDBP-228ENST00000629725 TOGARAM1Q9Y4F4 1720 aa28.23■■■□□ 2.11
TARDBP-228ENST00000629725 UBR3Q6ZT12 1888 aa28.22■■■□□ 2.11
TARDBP-228ENST00000629725 SMARCC1Q92922 1105 aaPredicted RBP28.22■■■□□ 2.11
TARDBP-228ENST00000629725 ADCY9O60503 1353 aa28.22■■■□□ 2.11
TARDBP-228ENST00000629725 KIF20BQ96Q89 1820 aa28.21■■■□□ 2.11
TARDBP-228ENST00000629725 CYP27B1O15528 508 aa28.21■■■□□ 2.11
TARDBP-228ENST00000629725 FLT4P35916 1363 aa28.21■■■□□ 2.11
TARDBP-228ENST00000629725 ZNF526Q8TF50 670 aaPredicted RBP28.2■■■□□ 2.1
TARDBP-228ENST00000629725 KIF24Q5T7B8 1368 aa28.19■■■□□ 2.1
TARDBP-228ENST00000629725 PHF14O94880 888 aa28.18■■■□□ 2.1
TARDBP-228ENST00000629725 AMIGO3Q86WK7 504 aa28.18■■■□□ 2.1
TARDBP-228ENST00000629725 PKD1L3Q7Z443 1732 aa28.18■■■□□ 2.1
TARDBP-228ENST00000629725 NSD3Q9BZ95 1437 aa28.18■■■□□ 2.1
TARDBP-228ENST00000629725 IGSF1Q8N6C5 1336 aa28.18■■■□□ 2.1
TARDBP-228ENST00000629725 HSPA6P17066 643 aa28.17■■■□□ 2.1
TARDBP-228ENST00000629725 TMF1P82094 1093 aa28.17■■■□□ 2.1
TARDBP-228ENST00000629725 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.16■■■□□ 2.1
TARDBP-228ENST00000629725 PIGBQ92521 554 aa28.15■■■□□ 2.1
TARDBP-228ENST00000629725 WWC3Q9ULE0 1092 aa28.15■■■□□ 2.1
TARDBP-228ENST00000629725 SMIM5Q71RC9 77 aa28.14■■■□□ 2.1
TARDBP-228ENST00000629725 MAP2P11137 1827 aaKnown RBP28.13■■■□□ 2.09
TARDBP-228ENST00000629725 SSFA2P28290 1259 aa28.13■■■□□ 2.09
TARDBP-228ENST00000629725 NKX1-1Q15270 411 aaPredicted RBP28.11■■■□□ 2.09
TARDBP-228ENST00000629725 LOC102724428A0A0B4J2F2 783 aa28.1■■■□□ 2.09
TARDBP-228ENST00000629725 SIK1P57059 783 aa28.1■■■□□ 2.09
TARDBP-228ENST00000629725 SPG7Q9UQ90 795 aa28.1■■■□□ 2.09
TARDBP-228ENST00000629725 LINC00116Q8NCU8 138 aa28.09■■■□□ 2.09
TARDBP-228ENST00000629725 EMILIN1Q9Y6C2 1016 aa28.09■■■□□ 2.09
TARDBP-228ENST00000629725 NCAPD2Q15021 1401 aa28.07■■■□□ 2.08
TARDBP-228ENST00000629725 CDCA8Q53HL2 280 aa28.06■■■□□ 2.08
TARDBP-228ENST00000629725 TMOD3Q9NYL9 352 aa28.06■■■□□ 2.08
TARDBP-228ENST00000629725 GNPATO15228 680 aa28.05■■■□□ 2.08
TARDBP-228ENST00000629725 PPM1GO15355 546 aaPredicted RBP28.05■■■□□ 2.08
TARDBP-228ENST00000629725 KIF3CO14782 793 aa28.03■■■□□ 2.08
TARDBP-228ENST00000629725 ATP6V1AP38606 617 aa28.03■■■□□ 2.08
TARDBP-228ENST00000629725 ASAP1Q9ULH1 1129 aa28.03■■■□□ 2.08
TARDBP-228ENST00000629725 ANKRD26Q9UPS8 1709 aa28.03■■■□□ 2.08
TARDBP-228ENST00000629725 CICQ96RK0 1608 aaPredicted RBP28.03■■■□□ 2.08
TARDBP-228ENST00000629725 ITPK1Q13572 414 aa28.02■■■□□ 2.08
TARDBP-228ENST00000629725 CARD14Q9BXL6 1004 aa28.02■■■□□ 2.08
TARDBP-228ENST00000629725 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.02■■■□□ 2.083e-7■■□□□ 13.6
TARDBP-228ENST00000629725 KIF13BQ9NQT8 1826 aa28.02■■■□□ 2.08
TARDBP-228ENST00000629725 MMP10P09238 476 aa28■■■□□ 2.07
TARDBP-228ENST00000629725 N4BP2Q86UW6 1770 aaPredicted RBP27.99■■■□□ 2.07
TARDBP-228ENST00000629725 WASHC2AQ641Q2 1341 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms