RNA–Protein interactions for RNA: ENST00000629717.1

NRXN1-231, Transcript of neurexin 1, human

TSL 2

Gene NRXN1, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-231	ENST00000629717	ST20-MTHFS	A0A0A6YYL1	179 aa		12.43	□□□□□ -0.42
NRXN1-231	ENST00000629717		G3V3G9	751 aa		12.43	□□□□□ -0.42
NRXN1-231	ENST00000629717	GC	P02774	474 aa		12.43	□□□□□ -0.42
NRXN1-231	ENST00000629717	PUS7	Q96PZ0	661 aa	Known RBP	12.43	□□□□□ -0.42
NRXN1-231	ENST00000629717	CHRNA2	Q15822	529 aa		12.42	□□□□□ -0.42
NRXN1-231	ENST00000629717	TMEM132A	Q24JP5	1023 aa		12.42	□□□□□ -0.42
NRXN1-231	ENST00000629717	SEPT12	Q8IYM1	358 aa		12.42	□□□□□ -0.42
NRXN1-231	ENST00000629717	TESK2	Q96S53	571 aa		12.42	□□□□□ -0.42
NRXN1-231	ENST00000629717	COL14A1	Q05707	1796 aa	Known RBP	12.42	□□□□□ -0.42
NRXN1-231	ENST00000629717	GLI3	P10071	1580 aa		12.42	□□□□□ -0.42
NRXN1-231	ENST00000629717	CRYBG1	Q9Y4K1	1723 aa		12.42	□□□□□ -0.42
NRXN1-231	ENST00000629717	CPD	O75976	1380 aa		12.42	□□□□□ -0.42
NRXN1-231	ENST00000629717	PLCH1	Q4KWH8	1693 aa		12.42	□□□□□ -0.42
NRXN1-231	ENST00000629717	TTC21B	Q7Z4L5	1316 aa		12.41	□□□□□ -0.42
NRXN1-231	ENST00000629717	CPSF1	Q10570	1443 aa	Known RBP	12.41	□□□□□ -0.42
NRXN1-231	ENST00000629717	LCE2D	Q5TA82	110 aa	Predicted RBP	12.41	□□□□□ -0.42
NRXN1-231	ENST00000629717	SRCAP	Q6ZRS2	3230 aa		12.41	□□□□□ -0.42
NRXN1-231	ENST00000629717	ARX	Q96QS3	562 aa		12.41	□□□□□ -0.42
NRXN1-231	ENST00000629717	KTN1	Q86UP2	1357 aa	Known RBP	12.41	□□□□□ -0.42
NRXN1-231	ENST00000629717	SPATA31A5	Q5VU36	1347 aa		12.4	□□□□□ -0.42
NRXN1-231	ENST00000629717	SPATA31A7	Q8IWB4	1347 aa		12.4	□□□□□ -0.42
NRXN1-231	ENST00000629717	TMC1	Q8TDI8	760 aa		12.4	□□□□□ -0.42
NRXN1-231	ENST00000629717	FAM163A	Q96GL9	167 aa	Predicted RBP	12.4	□□□□□ -0.42
NRXN1-231	ENST00000629717	TTC21A	Q8NDW8	1320 aa		12.39	□□□□□ -0.43
NRXN1-231	ENST00000629717	FAM98C	Q17RN3	349 aa	Known RBP	12.39	□□□□□ -0.43
NRXN1-231	ENST00000629717	SLC12A5	Q9H2X9	1139 aa		12.39	□□□□□ -0.43
NRXN1-231	ENST00000629717	PHRF1	Q9P1Y6	1649 aa	Known RBP	12.38	□□□□□ -0.43
NRXN1-231	ENST00000629717	EVA1C	P58658	441 aa		12.38	□□□□□ -0.43
NRXN1-231	ENST00000629717	CCDC125	Q86Z20	511 aa		12.38	□□□□□ -0.43
NRXN1-231	ENST00000629717	MICALL2	Q8IY33	904 aa		12.38	□□□□□ -0.43
NRXN1-231	ENST00000629717	CCER1	Q8TC90	406 aa	Predicted RBP	12.38	□□□□□ -0.43
NRXN1-231	ENST00000629717	STRN4	Q9NRL3	753 aa		12.38	□□□□□ -0.43
NRXN1-231	ENST00000629717	TERF2IP	Q9NYB0	399 aa		12.38	□□□□□ -0.43
NRXN1-231	ENST00000629717	USP47	Q96K76	1375 aa		12.38	□□□□□ -0.43
NRXN1-231	ENST00000629717	SPATA31A1	Q5TZJ5	1347 aa		12.37	□□□□□ -0.43
NRXN1-231	ENST00000629717	NRAP	Q86VF7	1730 aa		12.37	□□□□□ -0.43
NRXN1-231	ENST00000629717	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	12.37	□□□□□ -0.43
NRXN1-231	ENST00000629717	NRK	Q7Z2Y5	1582 aa		12.37	□□□□□ -0.43
NRXN1-231	ENST00000629717	CD163L1	Q9NR16	1453 aa		12.36	□□□□□ -0.43
NRXN1-231	ENST00000629717		A0A0G2JS52	829 aa		12.36	□□□□□ -0.43
NRXN1-231	ENST00000629717	MYT1	Q01538	1121 aa		12.36	□□□□□ -0.43
NRXN1-231	ENST00000629717	KRT27	Q7Z3Y8	459 aa		12.36	□□□□□ -0.43
NRXN1-231	ENST00000629717	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	12.36	□□□□□ -0.43
NRXN1-231	ENST00000629717	KCNH5	Q8NCM2	988 aa		12.36	□□□□□ -0.43
NRXN1-231	ENST00000629717	SLIT3	O75094	1523 aa		12.36	□□□□□ -0.43
NRXN1-231	ENST00000629717	CAMTA1	Q9Y6Y1	1673 aa		12.35	□□□□□ -0.43
NRXN1-231	ENST00000629717	AATK	Q6ZMQ8	1374 aa		12.35	□□□□□ -0.43
NRXN1-231	ENST00000629717	NINL	Q9Y2I6	1382 aa		12.35	□□□□□ -0.43
NRXN1-231	ENST00000629717	TMF1	P82094	1093 aa		12.35	□□□□□ -0.43
NRXN1-231	ENST00000629717	LARP1	Q6PKG0	1096 aa	Known RBP	12.35	□□□□□ -0.43
NRXN1-231	ENST00000629717	PIK3C2A	O00443	1686 aa		12.35	□□□□□ -0.43
NRXN1-231	ENST00000629717	ARHGEF25	Q86VW2	580 aa		12.34	□□□□□ -0.43
NRXN1-231	ENST00000629717	EDC4	Q6P2E9	1401 aa	Known RBP	12.34	□□□□□ -0.43
NRXN1-231	ENST00000629717		A0A1W2PP64	1363 aa		12.33	□□□□□ -0.44
NRXN1-231	ENST00000629717	USP31	Q70CQ4	1352 aa		12.33	□□□□□ -0.44
NRXN1-231	ENST00000629717	ZBTB7C	A1YPR0	619 aa		12.33	□□□□□ -0.44
NRXN1-231	ENST00000629717	CDCA8	Q53HL2	280 aa		12.33	□□□□□ -0.44
NRXN1-231	ENST00000629717	BARGIN	Q6ZT62	677 aa		12.33	□□□□□ -0.44
NRXN1-231	ENST00000629717	USP35	Q9P2H5	1018 aa		12.33	□□□□□ -0.44
NRXN1-231	ENST00000629717	AKAP12	Q02952	1782 aa		12.33	□□□□□ -0.44
NRXN1-231	ENST00000629717	LMO7	Q8WWI1	1683 aa		12.32	□□□□□ -0.44
NRXN1-231	ENST00000629717	BLM	P54132	1417 aa	Predicted RBP	12.32	□□□□□ -0.44
NRXN1-231	ENST00000629717	SNPH	O15079	494 aa		12.32	□□□□□ -0.44
NRXN1-231	ENST00000629717	NME9	Q86XW9	330 aa		12.32	□□□□□ -0.44
NRXN1-231	ENST00000629717	TCP11L2	Q8N4U5	519 aa		12.32	□□□□□ -0.44
NRXN1-231	ENST00000629717	DAXX	Q9UER7	740 aa	Predicted RBP	12.32	□□□□□ -0.44
NRXN1-231	ENST00000629717	AXIN2	Q9Y2T1	843 aa		12.32	□□□□□ -0.44
NRXN1-231	ENST00000629717	THRAP3	Q9Y2W1	955 aa	Known RBP	12.32	□□□□□ -0.44
NRXN1-231	ENST00000629717	COL5A2	P05997	1499 aa	Predicted RBP	12.32	□□□□□ -0.44
NRXN1-231	ENST00000629717	POTEM	A6NI47	508 aa		12.3	□□□□□ -0.44
NRXN1-231	ENST00000629717	PLSCR2	Q9NRY7	297 aa		12.3	□□□□□ -0.44
NRXN1-231	ENST00000629717	MON2	Q7Z3U7	1717 aa		12.3	□□□□□ -0.44
NRXN1-231	ENST00000629717	CRB1	P82279	1406 aa		12.29	□□□□□ -0.44
NRXN1-231	ENST00000629717	NFAT5	O94916	1531 aa		12.29	□□□□□ -0.44
NRXN1-231	ENST00000629717	SF3B2	Q13435	895 aa	Known RBP	12.29	□□□□□ -0.44
NRXN1-231	ENST00000629717	POTEG	Q6S5H5	508 aa		12.29	□□□□□ -0.44
NRXN1-231	ENST00000629717	BRWD3	Q6RI45	1802 aa		12.29	□□□□□ -0.44
NRXN1-231	ENST00000629717	WDR17	Q8IZU2	1322 aa		12.29	□□□□□ -0.44
NRXN1-231	ENST00000629717	ANKRD36B	Q8N2N9	1353 aa		12.29	□□□□□ -0.44
NRXN1-231	ENST00000629717	THSD7A	Q9UPZ6	1657 aa		12.29	□□□□□ -0.44
NRXN1-231	ENST00000629717	ST18	O60284	1047 aa		12.28	□□□□□ -0.44
NRXN1-231	ENST00000629717	PDE3B	Q13370	1112 aa		12.28	□□□□□ -0.44
NRXN1-231	ENST00000629717	FAM182B	Q5T319	152 aa		12.28	□□□□□ -0.44
NRXN1-231	ENST00000629717	TMEM92	Q6UXU6	159 aa		12.28	□□□□□ -0.44
NRXN1-231	ENST00000629717	TOM1L2	Q6ZVM7	507 aa		12.28	□□□□□ -0.44
NRXN1-231	ENST00000629717	ERICH6	Q7L0X2	663 aa		12.28	□□□□□ -0.44
NRXN1-231	ENST00000629717	FAM196A	Q6ZSG2	479 aa		12.27	□□□□□ -0.45
NRXN1-231	ENST00000629717	OVOS2	A0A0J9YW53	1432 aa		12.27	□□□□□ -0.45
NRXN1-231	ENST00000629717	OVOS2	Q6IE36	1432 aa		12.27	□□□□□ -0.45
NRXN1-231	ENST00000629717	CSB-PGBD3	P0DP91	1061 aa		12.26	□□□□□ -0.45
NRXN1-231	ENST00000629717	EIF4G2	P78344	907 aa	Known RBP eCLIP	12.26	□□□□□ -0.45
NRXN1-231	ENST00000629717	DEFB132	Q7Z7B7	95 aa		12.26	□□□□□ -0.45
NRXN1-231	ENST00000629717	COG3	Q96JB2	828 aa		12.26	□□□□□ -0.45
NRXN1-231	ENST00000629717	CARD10	Q9BWT7	1032 aa		12.26	□□□□□ -0.45
NRXN1-231	ENST00000629717	ABCC6	O95255	1503 aa		12.26	□□□□□ -0.45
NRXN1-231	ENST00000629717	COL18A1	P39060	1754 aa		12.25	□□□□□ -0.45
NRXN1-231	ENST00000629717	CDCA7	Q9BWT1	371 aa	Predicted RBP	12.25	□□□□□ -0.45
NRXN1-231	ENST00000629717	USP54	Q70EL1	1684 aa		12.25	□□□□□ -0.45
NRXN1-231	ENST00000629717	FYB1	O15117	783 aa		12.24	□□□□□ -0.45
NRXN1-231	ENST00000629717	PPP1R37	O75864	691 aa		12.24	□□□□□ -0.45

Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms