RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 LAMC1P11047 1609 aa6.88□□□□□ -1.31
LINC00550-201ENST00000629293 SPATA31A5Q5VU36 1347 aa6.88□□□□□ -1.31
LINC00550-201ENST00000629293 SPATA31A7Q8IWB4 1347 aa6.88□□□□□ -1.31
LINC00550-201ENST00000629293 RAB3GAP2Q9H2M9 1393 aa6.88□□□□□ -1.31
LINC00550-201ENST00000629293 SRPK2P78362 688 aaKnown RBP6.88□□□□□ -1.31
LINC00550-201ENST00000629293 PIP4P2Q8N4L2 257 aa6.88□□□□□ -1.31
LINC00550-201ENST00000629293 PPP1R1BQ9UD71 204 aaPredicted RBP6.88□□□□□ -1.31
LINC00550-201ENST00000629293 NRXN1Q9ULB1 1477 aa6.87□□□□□ -1.31
LINC00550-201ENST00000629293 CDK19Q9BWU1 502 aa6.87□□□□□ -1.31
LINC00550-201ENST00000629293 BRWD3Q6RI45 1802 aa6.87□□□□□ -1.31
LINC00550-201ENST00000629293 TMEM121BQ9BXQ6 578 aaPredicted RBP6.87□□□□□ -1.31
LINC00550-201ENST00000629293 FMN2Q9NZ56 1722 aa6.87□□□□□ -1.31
LINC00550-201ENST00000629293 LARP1Q6PKG0 1096 aaKnown RBP6.86□□□□□ -1.31
LINC00550-201ENST00000629293 DDRGK1Q96HY6 314 aa6.86□□□□□ -1.31
LINC00550-201ENST00000629293 FAM196AQ6ZSG2 479 aa6.86□□□□□ -1.31
LINC00550-201ENST00000629293 PDCD7Q8N8D1 485 aaKnown RBP6.86□□□□□ -1.31
LINC00550-201ENST00000629293 PTGER2P43116 358 aa6.86□□□□□ -1.31
LINC00550-201ENST00000629293 MS4A3Q96HJ5 214 aa6.86□□□□□ -1.31
LINC00550-201ENST00000629293 ACEP12821 1306 aa6.86□□□□□ -1.31
LINC00550-201ENST00000629293 KIF1AQ12756 1690 aa6.85□□□□□ -1.31
LINC00550-201ENST00000629293 A6NJR5 290 aa6.85□□□□□ -1.31
LINC00550-201ENST00000629293 SPATA31A1Q5TZJ5 1347 aa6.85□□□□□ -1.31
LINC00550-201ENST00000629293 MARF1Q9Y4F3 1742 aaKnown RBP6.85□□□□□ -1.31
LINC00550-201ENST00000629293 APBB1O00213 710 aa6.85□□□□□ -1.31
LINC00550-201ENST00000629293 NBPF8Q3BBV2 869 aa6.85□□□□□ -1.31
LINC00550-201ENST00000629293 MICALL2Q8IY33 904 aa6.85□□□□□ -1.31
LINC00550-201ENST00000629293 CLUAP1Q96AJ1 413 aa6.85□□□□□ -1.31
LINC00550-201ENST00000629293 ARID3AQ99856 593 aa6.85□□□□□ -1.31
LINC00550-201ENST00000629293 ANKARQ7Z5J8 1434 aa6.85□□□□□ -1.31
LINC00550-201ENST00000629293 EIF3AQ14152 1382 aaKnown RBP6.85□□□□□ -1.31
LINC00550-201ENST00000629293 TTLL13PA6NNM8 815 aa6.84□□□□□ -1.31
LINC00550-201ENST00000629293 NBPF1Q3BBV0 1214 aa6.84□□□□□ -1.31
LINC00550-201ENST00000629293 NBPF14Q5TI25 921 aa6.84□□□□□ -1.31
LINC00550-201ENST00000629293 GOLGB1Q14789 3259 aaKnown RBP6.84□□□□□ -1.31
LINC00550-201ENST00000629293 CLSPNQ9HAW4 1339 aa6.84□□□□□ -1.31
LINC00550-201ENST00000629293 YY1P25490 414 aa6.84□□□□□ -1.31
LINC00550-201ENST00000629293 KAT6BQ8WYB5 2073 aa6.84□□□□□ -1.31
LINC00550-201ENST00000629293 TRAK2O60296 914 aa6.83□□□□□ -1.32
LINC00550-201ENST00000629293 CSB-PGBD3P0DP91 1061 aa6.83□□□□□ -1.32
LINC00550-201ENST00000629293 PLCH1Q4KWH8 1693 aa6.83□□□□□ -1.32
LINC00550-201ENST00000629293 TCP11L2Q8N4U5 519 aa6.83□□□□□ -1.32
LINC00550-201ENST00000629293 CAMKK2Q96RR4 588 aa6.83□□□□□ -1.32
LINC00550-201ENST00000629293 TOM1L2Q6ZVM7 507 aa6.83□□□□□ -1.32
LINC00550-201ENST00000629293 IFT172Q9UG01 1749 aa6.83□□□□□ -1.32
LINC00550-201ENST00000629293 GNPATO15228 680 aa6.83□□□□□ -1.32
LINC00550-201ENST00000629293 GCP02774 474 aa6.83□□□□□ -1.32
LINC00550-201ENST00000629293 FLIIQ13045 1269 aa6.83□□□□□ -1.32
LINC00550-201ENST00000629293 MCM6Q14566 821 aa6.83□□□□□ -1.32
LINC00550-201ENST00000629293 NLRP13Q86W25 1043 aa6.83□□□□□ -1.32
LINC00550-201ENST00000629293 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.83□□□□□ -1.32
LINC00550-201ENST00000629293 DIEXFQ68CQ4 756 aaKnown RBP6.82□□□□□ -1.32
LINC00550-201ENST00000629293 CCDC82Q8N4S0 544 aa6.82□□□□□ -1.32
LINC00550-201ENST00000629293 CABP1Q9NZU7 370 aa6.82□□□□□ -1.32
LINC00550-201ENST00000629293 KNDC1Q76NI1 1749 aa6.82□□□□□ -1.32
LINC00550-201ENST00000629293 PTGDRQ13258 359 aa6.82□□□□□ -1.32
LINC00550-201ENST00000629293 PHOX2BQ99453 314 aa6.82□□□□□ -1.32
LINC00550-201ENST00000629293 TULP4Q9NRJ4 1543 aa6.81□□□□□ -1.32
LINC00550-201ENST00000629293 SPON1Q9HCB6 807 aa6.81□□□□□ -1.32
LINC00550-201ENST00000629293 BMP2KQ9NSY1 1161 aaPredicted RBP6.81□□□□□ -1.32
LINC00550-201ENST00000629293 ZBTB7AO95365 584 aa6.81□□□□□ -1.32
LINC00550-201ENST00000629293 NEUROD1Q13562 356 aa6.81□□□□□ -1.32
LINC00550-201ENST00000629293 DDB1Q16531 1140 aa6.81□□□□□ -1.32
LINC00550-201ENST00000629293 PTF1AQ7RTS3 328 aa6.81□□□□□ -1.32
LINC00550-201ENST00000629293 SSH2Q76I76 1423 aa6.8□□□□□ -1.32
LINC00550-201ENST00000629293 NWD2Q9ULI1 1742 aa6.8□□□□□ -1.32
LINC00550-201ENST00000629293 ADGRB1O14514 1584 aa6.8□□□□□ -1.32
LINC00550-201ENST00000629293 CD44P16070 742 aaKnown RBP6.8□□□□□ -1.32
LINC00550-201ENST00000629293 PDGFDQ9GZP0 370 aaPredicted RBP6.8□□□□□ -1.32
LINC00550-201ENST00000629293 CENPJQ9HC77 1338 aaPredicted RBP6.8□□□□□ -1.32
LINC00550-201ENST00000629293 TMEM92Q6UXU6 159 aa6.8□□□□□ -1.32
LINC00550-201ENST00000629293 PLPP6Q8IY26 295 aa6.8□□□□□ -1.32
LINC00550-201ENST00000629293 NPDC1Q9NQX5 325 aaPredicted RBP6.8□□□□□ -1.32
LINC00550-201ENST00000629293 ATP7BP35670 1465 aa6.8□□□□□ -1.32
LINC00550-201ENST00000629293 DLC1Q96QB1 1528 aa6.79□□□□□ -1.32
LINC00550-201ENST00000629293 HIC1Q14526 733 aa6.79□□□□□ -1.32
LINC00550-201ENST00000629293 GIGYF2Q6Y7W6 1299 aaKnown RBP6.79□□□□□ -1.32
LINC00550-201ENST00000629293 COL14A1Q05707 1796 aaKnown RBP6.79□□□□□ -1.32
LINC00550-201ENST00000629293 C2orf72A6NCS6 295 aa6.79□□□□□ -1.32
LINC00550-201ENST00000629293 TIE1P35590 1138 aa6.79□□□□□ -1.32
LINC00550-201ENST00000629293 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.79□□□□□ -1.32
LINC00550-201ENST00000629293 PPIP5K1Q6PFW1 1433 aa6.79□□□□□ -1.32
LINC00550-201ENST00000629293 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.79□□□□□ -1.32
LINC00550-201ENST00000629293 ANO8Q9HCE9 1232 aaPredicted RBP6.79□□□□□ -1.32
LINC00550-201ENST00000629293 ABCA3Q99758 1704 aa6.79□□□□□ -1.32
LINC00550-201ENST00000629293 GRXCR2A6NFK2 248 aa6.78□□□□□ -1.32
LINC00550-201ENST00000629293 KCNQ2O43526 872 aa6.78□□□□□ -1.32
LINC00550-201ENST00000629293 ACSBG1Q96GR2 724 aa6.78□□□□□ -1.32
LINC00550-201ENST00000629293 AXIN2Q9Y2T1 843 aa6.78□□□□□ -1.32
LINC00550-201ENST00000629293 CAMTA1Q9Y6Y1 1673 aa6.78□□□□□ -1.32
LINC00550-201ENST00000629293 NPM2Q86SE8 214 aaKnown RBP6.78□□□□□ -1.32
LINC00550-201ENST00000629293 POM121Q96HA1 1249 aa6.78□□□□□ -1.32
LINC00550-201ENST00000629293 TMC1Q8TDI8 760 aa6.77□□□□□ -1.33
LINC00550-201ENST00000629293 STAC3Q96MF2 364 aa6.77□□□□□ -1.33
LINC00550-201ENST00000629293 NLRP2Q9NX02 1062 aa6.77□□□□□ -1.33
LINC00550-201ENST00000629293 NRAPQ86VF7 1730 aa6.77□□□□□ -1.33
LINC00550-201ENST00000629293 TRPM3Q9HCF6 1732 aaPredicted RBP6.77□□□□□ -1.33
LINC00550-201ENST00000629293 PELP1Q8IZL8 1130 aaKnown RBP6.77□□□□□ -1.33
LINC00550-201ENST00000629293 SIN3AQ96ST3 1273 aa6.77□□□□□ -1.33
LINC00550-201ENST00000629293 ALS2Q96Q42 1657 aa6.77□□□□□ -1.33
LINC00550-201ENST00000629293 IRX5P78411 483 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms