RNA–Protein interactions for RNA: ENST00000629252.2

UBE3A-218, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5

Gene UBE3A, Length 1,112 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-218ENST00000629252 TFCP2L1Q9NZI6 479 aa28.57■■■□□ 2.16
UBE3A-218ENST00000629252 SHANK3Q9BYB0 1731 aa28.56■■■□□ 2.16
UBE3A-218ENST00000629252 SLC24A1O60721 1099 aa28.55■■■□□ 2.16
UBE3A-218ENST00000629252 RTL1A6NKG5 1358 aa28.54■■■□□ 2.16
UBE3A-218ENST00000629252 TMF1P82094 1093 aa28.54■■■□□ 2.16
UBE3A-218ENST00000629252 ZNF784Q8NCA9 323 aaPredicted RBP28.54■■■□□ 2.16
UBE3A-218ENST00000629252 TUBGCP6Q96RT7 1819 aa28.54■■■□□ 2.16
UBE3A-218ENST00000629252 SMG6Q86US8 1419 aaKnown RBP28.53■■■□□ 2.16
UBE3A-218ENST00000629252 USP47Q96K76 1375 aa28.53■■■□□ 2.16
UBE3A-218ENST00000629252 PNPLA7Q6ZV29 1317 aa28.53■■■□□ 2.16
UBE3A-218ENST00000629252 POLD1P28340 1107 aa28.53■■■□□ 2.16
UBE3A-218ENST00000629252 QSER1Q2KHR3 1735 aa28.52■■■□□ 2.16
UBE3A-218ENST00000629252 NBPF6Q5VWK0 638 aa28.52■■■□□ 2.16
UBE3A-218ENST00000629252 PELP1Q8IZL8 1130 aaKnown RBP28.52■■■□□ 2.16
UBE3A-218ENST00000629252 NBPF4Q96M43 638 aa28.52■■■□□ 2.16
UBE3A-218ENST00000629252 NSD2O96028 1365 aa28.51■■■□□ 2.16
UBE3A-218ENST00000629252 FYB1O15117 783 aa28.51■■■□□ 2.15
UBE3A-218ENST00000629252 MSH5O43196 834 aa28.51■■■□□ 2.15
UBE3A-218ENST00000629252 GPR162Q16538 588 aa28.51■■■□□ 2.15
UBE3A-218ENST00000629252 RAPGEF4Q8WZA2 1011 aa28.51■■■□□ 2.15
UBE3A-218ENST00000629252 CCNL1Q9UK58 526 aaPredicted RBP28.51■■■□□ 2.15
UBE3A-218ENST00000629252 LY75O60449 1722 aa28.5■■■□□ 2.15
UBE3A-218ENST00000629252 CHD4Q14839 1912 aa28.5■■■□□ 2.15
UBE3A-218ENST00000629252 SLC16A10Q8TF71 515 aa28.5■■■□□ 2.15
UBE3A-218ENST00000629252 MAP3K5Q99683 1374 aa28.49■■■□□ 2.15
UBE3A-218ENST00000629252 KIF20BQ96Q89 1820 aa28.48■■■□□ 2.15
UBE3A-218ENST00000629252 TATP17735 454 aaPredicted RBP28.45■■■□□ 2.14
UBE3A-218ENST00000629252 HSP90AB2PQ58FF8 381 aa28.45■■■□□ 2.14
UBE3A-218ENST00000629252 UTRNP46939 3433 aa28.44■■■□□ 2.14
UBE3A-218ENST00000629252 CGNL1Q0VF96 1302 aa28.43■■■□□ 2.14
UBE3A-218ENST00000629252 FLT4P35916 1363 aa28.41■■■□□ 2.14
UBE3A-218ENST00000629252 CDCA8Q53HL2 280 aa28.41■■■□□ 2.14
UBE3A-218ENST00000629252 PCDH11XQ9BZA7 1347 aa28.41■■■□□ 2.14
UBE3A-218ENST00000629252 PCDH11YQ9BZA8 1340 aa28.41■■■□□ 2.14
UBE3A-218ENST00000629252 INSRP06213 1382 aa28.4■■■□□ 2.14
UBE3A-218ENST00000629252 MSL1Q68DK7 614 aa28.4■■■□□ 2.14
UBE3A-218ENST00000629252 NLGN2Q8NFZ4 835 aa28.4■■■□□ 2.14
UBE3A-218ENST00000629252 COL24A1Q17RW2 1714 aa28.39■■■□□ 2.14
UBE3A-218ENST00000629252 PPM1GO15355 546 aaPredicted RBP28.38■■■□□ 2.13
UBE3A-218ENST00000629252 COL23A1Q86Y22 540 aaPredicted RBP28.38■■■□□ 2.13
UBE3A-218ENST00000629252 NSD3Q9BZ95 1437 aa28.37■■■□□ 2.13
UBE3A-218ENST00000629252 MPRIPQ6WCQ1 1025 aa28.37■■■□□ 2.13
UBE3A-218ENST00000629252 C5P01031 1676 aa28.37■■■□□ 2.13
UBE3A-218ENST00000629252 EMILIN1Q9Y6C2 1016 aa28.36■■■□□ 2.13
UBE3A-218ENST00000629252 PALLDQ8WX93 1383 aa28.35■■■□□ 2.13
UBE3A-218ENST00000629252 TRIM26Q12899 539 aaPredicted RBP28.33■■■□□ 2.13
UBE3A-218ENST00000629252 CARD14Q9BXL6 1004 aa28.33■■■□□ 2.13
UBE3A-218ENST00000629252 CYP27B1O15528 508 aa28.31■■■□□ 2.12
UBE3A-218ENST00000629252 KIF24Q5T7B8 1368 aa28.31■■■□□ 2.12
UBE3A-218ENST00000629252 TOGARAM1Q9Y4F4 1720 aa28.31■■■□□ 2.12
UBE3A-218ENST00000629252 SENP3-EIF4A1A0A087X0R7 540 aa28.3■■■□□ 2.12
UBE3A-218ENST00000629252 POLR3GLQ9BT43 218 aa28.3■■■□□ 2.12
UBE3A-218ENST00000629252 ITGB4P16144 1822 aa28.28■■■□□ 2.12
UBE3A-218ENST00000629252 TAF1LQ8IZX4 1826 aa28.28■■■□□ 2.12
UBE3A-218ENST00000629252 PKD1L3Q7Z443 1732 aa28.27■■■□□ 2.12
UBE3A-218ENST00000629252 PHF14O94880 888 aa28.26■■■□□ 2.11
UBE3A-218ENST00000629252 YBX3P16989 372 aaKnown RBP eCLIP28.26■■■□□ 2.113e-7■■■□□ 16.6
UBE3A-218ENST00000629252 C1QTNF8P60827 252 aa28.26■■■□□ 2.11
UBE3A-218ENST00000629252 AK7Q96M32 723 aa28.26■■■□□ 2.11
UBE3A-218ENST00000629252 C4BP0C0L5 1744 aa28.25■■■□□ 2.11
UBE3A-218ENST00000629252 SMARCC1Q92922 1105 aaPredicted RBP28.24■■■□□ 2.11
UBE3A-218ENST00000629252 GOLGB1Q14789 3259 aaKnown RBP28.23■■■□□ 2.11
UBE3A-218ENST00000629252 GIGYF1O75420 1035 aaPredicted RBP28.23■■■□□ 2.11
UBE3A-218ENST00000629252 FLAD1Q8NFF5 587 aa28.23■■■□□ 2.11
UBE3A-218ENST00000629252 SPG7Q9UQ90 795 aa28.23■■■□□ 2.11
UBE3A-218ENST00000629252 SMIM5Q71RC9 77 aa28.22■■■□□ 2.11
UBE3A-218ENST00000629252 PIGBQ92521 554 aa28.22■■■□□ 2.11
UBE3A-218ENST00000629252 MAP2P11137 1827 aaKnown RBP28.22■■■□□ 2.11
UBE3A-218ENST00000629252 ANKRD26Q9UPS8 1709 aa28.21■■■□□ 2.11
UBE3A-218ENST00000629252 GRIN3BO60391 1043 aa28.21■■■□□ 2.11
UBE3A-218ENST00000629252 HMGB2P26583 209 aaKnown RBP28.21■■■□□ 2.11
UBE3A-218ENST00000629252 TNNT2P45379 298 aaPredicted RBP28.21■■■□□ 2.11
UBE3A-218ENST00000629252 EYA1Q99502 592 aa28.19■■■□□ 2.1
UBE3A-218ENST00000629252 AMIGO3Q86WK7 504 aa28.18■■■□□ 2.1
UBE3A-218ENST00000629252 TMOD3Q9NYL9 352 aa28.18■■■□□ 2.1
UBE3A-218ENST00000629252 WWC3Q9ULE0 1092 aa28.18■■■□□ 2.1
UBE3A-218ENST00000629252 WASHC2AQ641Q2 1341 aa28.18■■■□□ 2.1
UBE3A-218ENST00000629252 NCAPD2Q15021 1401 aa28.17■■■□□ 2.1
UBE3A-218ENST00000629252 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.16■■■□□ 2.1
UBE3A-218ENST00000629252 UBR3Q6ZT12 1888 aa28.16■■■□□ 2.1
UBE3A-218ENST00000629252 LOC102724428A0A0B4J2F2 783 aa28.15■■■□□ 2.1
UBE3A-218ENST00000629252 SIK1P57059 783 aa28.15■■■□□ 2.1
UBE3A-218ENST00000629252 CD2APQ9Y5K6 639 aa28.15■■■□□ 2.1
UBE3A-218ENST00000629252 NKX1-1Q15270 411 aaPredicted RBP28.14■■■□□ 2.1
UBE3A-218ENST00000629252 PCGF6Q9BYE7 350 aa28.14■■■□□ 2.1
UBE3A-218ENST00000629252 POLKQ9UBT6 870 aa28.14■■■□□ 2.1
UBE3A-218ENST00000629252 LINC00116Q8NCU8 138 aa28.13■■■□□ 2.09
UBE3A-218ENST00000629252 ASAP1Q9ULH1 1129 aa28.13■■■□□ 2.09
UBE3A-218ENST00000629252 IFNL2Q8IZJ0 200 aa28.12■■■□□ 2.09
UBE3A-218ENST00000629252 GNPATO15228 680 aa28.11■■■□□ 2.09
UBE3A-218ENST00000629252 PHKG2P15735 406 aa28.11■■■□□ 2.09
UBE3A-218ENST00000629252 ATP6V1AP38606 617 aa28.1■■■□□ 2.09
UBE3A-218ENST00000629252 EIF4A2Q14240 407 aaKnown RBP28.1■■■□□ 2.09
UBE3A-218ENST00000629252 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.09■■■□□ 2.095e-19■□□□□ 9.5
UBE3A-218ENST00000629252 ATP10DQ9P241 1426 aa28.09■■■□□ 2.09
UBE3A-218ENST00000629252 SSFA2P28290 1259 aa28.08■■■□□ 2.09
UBE3A-218ENST00000629252 ITPK1Q13572 414 aa28.08■■■□□ 2.09
UBE3A-218ENST00000629252 IGSF1Q8N6C5 1336 aa28.08■■■□□ 2.09
UBE3A-218ENST00000629252 TIMELESSQ9UNS1 1208 aa28.07■■■□□ 2.08
UBE3A-218ENST00000629252 ZNF526Q8TF50 670 aaPredicted RBP28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms