RNA–Protein interactions for RNA: ENST00000629219.1

PKP4-218, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-218ENST00000629219 HSP90AB2PQ58FF8 381 aa12.48□□□□□ -0.41
PKP4-218ENST00000629219 PROM2Q8N271 834 aa12.48□□□□□ -0.41
PKP4-218ENST00000629219 PANK3Q9H999 370 aa12.48□□□□□ -0.41
PKP4-218ENST00000629219 NBPF6Q5VWK0 638 aa12.47□□□□□ -0.41
PKP4-218ENST00000629219 LTV1Q96GA3 475 aaPredicted RBP12.47□□□□□ -0.41
PKP4-218ENST00000629219 NBPF4Q96M43 638 aa12.47□□□□□ -0.41
PKP4-218ENST00000629219 DOT1LQ8TEK3 1739 aa12.47□□□□□ -0.41
PKP4-218ENST00000629219 PAPPAQ13219 1627 aa12.47□□□□□ -0.41
PKP4-218ENST00000629219 KAT6BQ8WYB5 2073 aa12.47□□□□□ -0.41
PKP4-218ENST00000629219 LY75O60449 1722 aa12.46□□□□□ -0.41
PKP4-218ENST00000629219 KIF7Q2M1P5 1343 aa12.46□□□□□ -0.41
PKP4-218ENST00000629219 ZCRB1Q8TBF4 217 aaKnown RBP12.46□□□□□ -0.41
PKP4-218ENST00000629219 RAPGEF4Q8WZA2 1011 aa12.46□□□□□ -0.41
PKP4-218ENST00000629219 POLKQ9UBT6 870 aa12.46□□□□□ -0.41
PKP4-218ENST00000629219 EMILIN1Q9Y6C2 1016 aa12.46□□□□□ -0.41
PKP4-218ENST00000629219 CASZ1Q86V15 1759 aa12.46□□□□□ -0.42
PKP4-218ENST00000629219 QSER1Q2KHR3 1735 aa12.45□□□□□ -0.42
PKP4-218ENST00000629219 NPC1L1Q9UHC9 1359 aa12.45□□□□□ -0.42
PKP4-218ENST00000629219 ZBTB7AO95365 584 aa12.45□□□□□ -0.42
PKP4-218ENST00000629219 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.45□□□□□ -0.42
PKP4-218ENST00000629219 PCDH11XQ9BZA7 1347 aa12.44□□□□□ -0.42
PKP4-218ENST00000629219 PCDH11YQ9BZA8 1340 aa12.44□□□□□ -0.42
PKP4-218ENST00000629219 TATP17735 454 aaPredicted RBP12.44□□□□□ -0.42
PKP4-218ENST00000629219 ATF5Q9Y2D1 282 aaPredicted RBP12.44□□□□□ -0.42
PKP4-218ENST00000629219 KNSTRNQ9Y448 316 aa12.44□□□□□ -0.42
PKP4-218ENST00000629219 HMGB2P26583 209 aaKnown RBP12.43□□□□□ -0.42
PKP4-218ENST00000629219 PTGER2P43116 358 aa12.43□□□□□ -0.42
PKP4-218ENST00000629219 AMER1Q5JTC6 1135 aaPredicted RBP12.43□□□□□ -0.42
PKP4-218ENST00000629219 POLR3GLQ9BT43 218 aa12.43□□□□□ -0.42
PKP4-218ENST00000629219 DCAF8L1A6NGE4 600 aa12.42□□□□□ -0.42
PKP4-218ENST00000629219 TXNRD1Q16881 649 aa12.42□□□□□ -0.42
PKP4-218ENST00000629219 SLC27A3Q5K4L6 730 aa12.42□□□□□ -0.42
PKP4-218ENST00000629219 ZNF784Q8NCA9 323 aaPredicted RBP12.42□□□□□ -0.42
PKP4-218ENST00000629219 IGSF1Q8N6C5 1336 aa12.41□□□□□ -0.42
PKP4-218ENST00000629219 DDX54Q8TDD1 881 aaKnown RBP12.41□□□□□ -0.42
PKP4-218ENST00000629219 ITGB4P16144 1822 aa12.41□□□□□ -0.42
PKP4-218ENST00000629219 PER1O15534 1290 aaPredicted RBP12.4□□□□□ -0.42
PKP4-218ENST00000629219 NKX1-1Q15270 411 aaPredicted RBP12.4□□□□□ -0.42
PKP4-218ENST00000629219 EYA1Q99502 592 aa12.4□□□□□ -0.42
PKP4-218ENST00000629219 TOGARAM1Q9Y4F4 1720 aa12.4□□□□□ -0.43
PKP4-218ENST00000629219 EIF4A2Q14240 407 aaKnown RBP12.39□□□□□ -0.43
PKP4-218ENST00000629219 MORC1Q86VD1 984 aa12.39□□□□□ -0.43
PKP4-218ENST00000629219 ACSBG1Q96GR2 724 aa12.39□□□□□ -0.43
PKP4-218ENST00000629219 SYT17Q9BSW7 474 aa12.39□□□□□ -0.43
PKP4-218ENST00000629219 FHDC1Q9C0D6 1143 aaPredicted RBP12.39□□□□□ -0.43
PKP4-218ENST00000629219 SPG7Q9UQ90 795 aa12.39□□□□□ -0.43
PKP4-218ENST00000629219 COL24A1Q17RW2 1714 aa12.38□□□□□ -0.43
PKP4-218ENST00000629219 PPM1GO15355 546 aaPredicted RBP12.38□□□□□ -0.43
PKP4-218ENST00000629219 SLC15A2Q16348 729 aa12.38□□□□□ -0.43
PKP4-218ENST00000629219 USHBP1Q8N6Y0 703 aa12.38□□□□□ -0.43
PKP4-218ENST00000629219 KDRP35968 1356 aa12.38□□□□□ -0.43
PKP4-218ENST00000629219 GOLGB1Q14789 3259 aaKnown RBP12.38□□□□□ -0.43
PKP4-218ENST00000629219 CYP27B1O15528 508 aa12.37□□□□□ -0.43
PKP4-218ENST00000629219 PRIM1P49642 420 aaKnown RBP12.37□□□□□ -0.43
PKP4-218ENST00000629219 SGIP1Q9BQI5 828 aa12.37□□□□□ -0.43
PKP4-218ENST00000629219 STK32BQ9NY57 414 aa12.37□□□□□ -0.43
PKP4-218ENST00000629219 CEP350Q5VT06 3117 aa12.36□□□□□ -0.43
PKP4-218ENST00000629219 ZNF831Q5JPB2 1677 aa12.36□□□□□ -0.43
PKP4-218ENST00000629219 TAF1LQ8IZX4 1826 aa12.36□□□□□ -0.43
PKP4-218ENST00000629219 C5P01031 1676 aa12.35□□□□□ -0.43
PKP4-218ENST00000629219 TUBGCP6Q96RT7 1819 aa12.34□□□□□ -0.43
PKP4-218ENST00000629219 HSP90AB1P08238 724 aaKnown RBP12.34□□□□□ -0.43
PKP4-218ENST00000629219 TNNT2P45379 298 aaPredicted RBP12.34□□□□□ -0.43
PKP4-218ENST00000629219 AMOTQ4VCS5 1084 aa12.34□□□□□ -0.43
PKP4-218ENST00000629219 IFNL2Q8IZJ0 200 aa12.34□□□□□ -0.43
PKP4-218ENST00000629219 AKT1S1Q96B36 256 aa12.34□□□□□ -0.43
PKP4-218ENST00000629219 LRRC4BQ9NT99 713 aa12.34□□□□□ -0.43
PKP4-218ENST00000629219 SENP3-EIF4A1A0A087X0R7 540 aa12.33□□□□□ -0.44
PKP4-218ENST00000629219 PHKG2P15735 406 aa12.33□□□□□ -0.44
PKP4-218ENST00000629219 IL13P35225 146 aa12.33□□□□□ -0.44
PKP4-218ENST00000629219 SLC16A10Q8TF71 515 aa12.33□□□□□ -0.44
PKP4-218ENST00000629219 SMARCC1Q92922 1105 aaPredicted RBP12.33□□□□□ -0.44
PKP4-218ENST00000629219 C1QTNF8P60827 252 aa12.32□□□□□ -0.44
PKP4-218ENST00000629219 SYTL4Q96C24 671 aaPredicted RBP12.32□□□□□ -0.44
PKP4-218ENST00000629219 MTFR1LQ9H019 292 aa12.32□□□□□ -0.44
PKP4-218ENST00000629219 PALLDQ8WX93 1383 aa12.31□□□□□ -0.44
PKP4-218ENST00000629219 PLEKHO1Q53GL0 409 aaPredicted RBP12.31□□□□□ -0.44
PKP4-218ENST00000629219 COL3A1P02461 1466 aaPredicted RBP12.31□□□□□ -0.44
PKP4-218ENST00000629219 SCN11AQ9UI33 1791 aa12.3□□□□□ -0.44
PKP4-218ENST00000629219 CICQ96RK0 1608 aaPredicted RBP12.3□□□□□ -0.44
PKP4-218ENST00000629219 ADAMTS7Q9UKP4 1686 aa12.3□□□□□ -0.44
PKP4-218ENST00000629219 ERVV-2B6SEH9 535 aa12.3□□□□□ -0.44
PKP4-218ENST00000629219 MTHFSP49914 203 aa12.3□□□□□ -0.44
PKP4-218ENST00000629219 ZNF827Q17R98 1081 aa12.3□□□□□ -0.44
PKP4-218ENST00000629219 ARXQ96QS3 562 aa12.3□□□□□ -0.44
PKP4-218ENST00000629219 CCNL1Q9UK58 526 aaPredicted RBP12.3□□□□□ -0.44
PKP4-218ENST00000629219 MAP3K5Q99683 1374 aa12.3□□□□□ -0.44
PKP4-218ENST00000629219 C4BP0C0L5 1744 aa12.29□□□□□ -0.44
PKP4-218ENST00000629219 DCAF5Q96JK2 942 aa12.29□□□□□ -0.44
PKP4-218ENST00000629219 VIRMAQ69YN4 1812 aaKnown RBP12.28□□□□□ -0.44
PKP4-218ENST00000629219 UBR3Q6ZT12 1888 aa12.28□□□□□ -0.44
PKP4-218ENST00000629219 MPRIPQ6WCQ1 1025 aa12.28□□□□□ -0.44
PKP4-218ENST00000629219 FLAD1Q8NFF5 587 aa12.28□□□□□ -0.44
PKP4-218ENST00000629219 PIGBQ92521 554 aa12.28□□□□□ -0.44
PKP4-218ENST00000629219 TMOD3Q9NYL9 352 aa12.28□□□□□ -0.44
PKP4-218ENST00000629219 CHD4Q14839 1912 aa12.28□□□□□ -0.44
PKP4-218ENST00000629219 KDM6AO15550 1401 aaPredicted RBP12.28□□□□□ -0.44
PKP4-218ENST00000629219 MRC1P22897 1456 aa12.27□□□□□ -0.44
PKP4-218ENST00000629219 SULT6B1Q6IMI4 303 aa12.27□□□□□ -0.45
PKP4-218ENST00000629219 PNPLA7Q6ZV29 1317 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms