RNA–Protein interactions for RNA: ENST00000628689.2

TCF4-266, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-266ENST00000628689 WDR17Q8IZU2 1322 aa10.72□□□□□ -0.69
TCF4-266ENST00000628689 MLLT1Q03111 559 aaPredicted RBP10.71□□□□□ -0.69
TCF4-266ENST00000628689 NLRP13Q86W25 1043 aa10.71□□□□□ -0.69
TCF4-266ENST00000628689 NUDT16Q96DE0 195 aaKnown RBP10.71□□□□□ -0.69
TCF4-266ENST00000628689 CARD10Q9BWT7 1032 aa10.7□□□□□ -0.7
TCF4-266ENST00000628689 SPATA31E1Q6ZUB1 1445 aa10.69□□□□□ -0.7
TCF4-266ENST00000628689 ACEP12821 1306 aa10.69□□□□□ -0.7
TCF4-266ENST00000628689 PRDM10Q9NQV6 1147 aa10.69□□□□□ -0.7
TCF4-266ENST00000628689 COL18A1P39060 1754 aa10.69□□□□□ -0.7
TCF4-266ENST00000628689 FOXN1O15353 648 aa10.68□□□□□ -0.7
TCF4-266ENST00000628689 RGS19P49795 217 aa10.68□□□□□ -0.7
TCF4-266ENST00000628689 ABHD8Q96I13 439 aa10.68□□□□□ -0.7
TCF4-266ENST00000628689 TRAK1Q9UPV9 953 aa10.68□□□□□ -0.7
TCF4-266ENST00000628689 POLR3AO14802 1390 aaPredicted RBP10.67□□□□□ -0.7
TCF4-266ENST00000628689 CICQ96RK0 1608 aaPredicted RBP10.67□□□□□ -0.7
TCF4-266ENST00000628689 SMC1BQ8NDV3 1235 aa10.66□□□□□ -0.7
TCF4-266ENST00000628689 RRAGCQ9HB90 399 aa10.66□□□□□ -0.7
TCF4-266ENST00000628689 KIAA1210Q9ULL0 1709 aa10.66□□□□□ -0.7
TCF4-266ENST00000628689 ITSN1Q15811 1721 aa10.65□□□□□ -0.7
TCF4-266ENST00000628689 CSB-PGBD3P0DP91 1061 aa10.65□□□□□ -0.7
TCF4-266ENST00000628689 RGPD5Q99666 1765 aa10.65□□□□□ -0.71
TCF4-266ENST00000628689 PLEKHG3A1L390 1219 aa10.64□□□□□ -0.71
TCF4-266ENST00000628689 ARHGAP27Q6ZUM4 889 aa10.64□□□□□ -0.71
TCF4-266ENST00000628689 TRPM1Q7Z4N2 1603 aa10.64□□□□□ -0.71
TCF4-266ENST00000628689 CCDC61Q9Y6R9 512 aa10.63□□□□□ -0.71
TCF4-266ENST00000628689 C10orf71Q711Q0 1435 aa10.63□□□□□ -0.71
TCF4-266ENST00000628689 PPIP5K1Q6PFW1 1433 aa10.62□□□□□ -0.71
TCF4-266ENST00000628689 LOC105371045A0A1W2PR82 267 aa10.62□□□□□ -0.71
TCF4-266ENST00000628689 NLRP6P59044 892 aa10.62□□□□□ -0.71
TCF4-266ENST00000628689 C9orf131Q5VYM1 1079 aa10.62□□□□□ -0.71
TCF4-266ENST00000628689 CDK19Q9BWU1 502 aa10.62□□□□□ -0.71
TCF4-266ENST00000628689 ABCC6O95255 1503 aa10.62□□□□□ -0.71
TCF4-266ENST00000628689 KCPQ6ZWJ8 1503 aa10.62□□□□□ -0.71
TCF4-266ENST00000628689 CCDC7Q96M83 1385 aa10.62□□□□□ -0.71
TCF4-266ENST00000628689 KDM2BQ8NHM5 1336 aa10.61□□□□□ -0.71
TCF4-266ENST00000628689 CTCFP49711 727 aaPredicted RBP10.61□□□□□ -0.71
TCF4-266ENST00000628689 ARHGEF25Q86VW2 580 aa10.61□□□□□ -0.71
TCF4-266ENST00000628689 CCNL1Q9UK58 526 aaPredicted RBP10.61□□□□□ -0.71
TCF4-266ENST00000628689 CCDC85CA6NKD9 419 aa10.6□□□□□ -0.71
TCF4-266ENST00000628689 REM2Q8IYK8 340 aaPredicted RBP10.6□□□□□ -0.71
TCF4-266ENST00000628689 BCS1LQ9Y276 419 aa10.6□□□□□ -0.71
TCF4-266ENST00000628689 LY75O60449 1722 aa10.6□□□□□ -0.71
TCF4-266ENST00000628689 SLIT3O75094 1523 aa10.59□□□□□ -0.71
TCF4-266ENST00000628689 PRIM1P49642 420 aaKnown RBP10.59□□□□□ -0.71
TCF4-266ENST00000628689 LBX1P52954 281 aa10.59□□□□□ -0.71
TCF4-266ENST00000628689 SMIM5Q71RC9 77 aa10.59□□□□□ -0.71
TCF4-266ENST00000628689 MKRN1Q9UHC7 482 aaKnown RBP10.59□□□□□ -0.71
TCF4-266ENST00000628689 PXDNLA1KZ92 1463 aa10.59□□□□□ -0.71
TCF4-266ENST00000628689 ADGRB1O14514 1584 aa10.59□□□□□ -0.71
TCF4-266ENST00000628689 PLEKHG2Q9H7P9 1386 aa10.58□□□□□ -0.72
TCF4-266ENST00000628689 IL2RBP14784 551 aa10.58□□□□□ -0.72
TCF4-266ENST00000628689 FLAD1Q8NFF5 587 aa10.58□□□□□ -0.72
TCF4-266ENST00000628689 CPSF1Q10570 1443 aaKnown RBP10.58□□□□□ -0.72
TCF4-266ENST00000628689 ERBB3P21860 1342 aa10.58□□□□□ -0.72
TCF4-266ENST00000628689 PIK3C2AO00443 1686 aa10.57□□□□□ -0.72
TCF4-266ENST00000628689 SYTL4Q96C24 671 aaPredicted RBP10.57□□□□□ -0.72
TCF4-266ENST00000628689 A0A0G2JLW4 131 aa10.56□□□□□ -0.72
TCF4-266ENST00000628689 AMIGO3Q86WK7 504 aa10.56□□□□□ -0.72
TCF4-266ENST00000628689 DDX54Q8TDD1 881 aaKnown RBP10.56□□□□□ -0.72
TCF4-266ENST00000628689 AIDAQ96BJ3 306 aa10.56□□□□□ -0.72
TCF4-266ENST00000628689 NSD2O96028 1365 aa10.55□□□□□ -0.72
TCF4-266ENST00000628689 N4BP2Q86UW6 1770 aaPredicted RBP10.55□□□□□ -0.72
TCF4-266ENST00000628689 TNRC6CQ9HCJ0 1690 aaKnown RBP10.55□□□□□ -0.72
TCF4-266ENST00000628689 TNRC18O15417 2968 aaPredicted RBP10.55□□□□□ -0.72
TCF4-266ENST00000628689 SOX12O15370 315 aa10.54□□□□□ -0.72
TCF4-266ENST00000628689 FCHSD2O94868 740 aa10.54□□□□□ -0.72
TCF4-266ENST00000628689 TGFB2P61812 414 aa10.54□□□□□ -0.72
TCF4-266ENST00000628689 PKD1L3Q7Z443 1732 aa10.54□□□□□ -0.72
TCF4-266ENST00000628689 CREBZFQ9NS37 354 aa10.54□□□□□ -0.72
TCF4-266ENST00000628689 NLRP2Q9NX02 1062 aa10.54□□□□□ -0.72
TCF4-266ENST00000628689 WBP1LQ9NX94 342 aa10.54□□□□□ -0.72
TCF4-266ENST00000628689 RNF181Q9P0P0 153 aa10.54□□□□□ -0.72
TCF4-266ENST00000628689 ANKRD36BQ8N2N9 1353 aa10.53□□□□□ -0.72
TCF4-266ENST00000628689 KIAA1551Q9HCM1 1747 aa10.53□□□□□ -0.72
TCF4-266ENST00000628689 HSPA8P11142 646 aaKnown RBP10.53□□□□□ -0.72
TCF4-266ENST00000628689 VEGFAP15692 232 aaPredicted RBP10.53□□□□□ -0.72
TCF4-266ENST00000628689 USP54Q70EL1 1684 aa10.53□□□□□ -0.72
TCF4-266ENST00000628689 SBF1O95248 1867 aa10.53□□□□□ -0.72
TCF4-266ENST00000628689 DPEP1P16444 411 aa10.52□□□□□ -0.73
TCF4-266ENST00000628689 KCNH5Q8NCM2 988 aa10.52□□□□□ -0.73
TCF4-266ENST00000628689 QRICH2Q9H0J4 1663 aa10.52□□□□□ -0.73
TCF4-266ENST00000628689 KIF13BQ9NQT8 1826 aa10.51□□□□□ -0.73
TCF4-266ENST00000628689 SPDYE1Q8NFV5 336 aaPredicted RBP10.51□□□□□ -0.73
TCF4-266ENST00000628689 CNTNAP1P78357 1384 aa10.51□□□□□ -0.73
TCF4-266ENST00000628689 TAF1LQ8IZX4 1826 aa10.5□□□□□ -0.73
TCF4-266ENST00000628689 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.5□□□□□ -0.73
TCF4-266ENST00000628689 PHF14O94880 888 aa10.5□□□□□ -0.73
TCF4-266ENST00000628689 VEGFBP49765 207 aa10.5□□□□□ -0.73
TCF4-266ENST00000628689 C5P01031 1676 aa10.5□□□□□ -0.73
TCF4-266ENST00000628689 USP47Q96K76 1375 aa10.5□□□□□ -0.73
TCF4-266ENST00000628689 BRCA1P38398 1863 aaKnown RBP10.49□□□□□ -0.73
TCF4-266ENST00000628689 MMP10P09238 476 aa10.49□□□□□ -0.73
TCF4-266ENST00000628689 KCNA3P22001 575 aa10.49□□□□□ -0.73
TCF4-266ENST00000628689 ARFGEF1Q9Y6D6 1849 aa10.49□□□□□ -0.73
TCF4-266ENST00000628689 DOT1LQ8TEK3 1739 aa10.48□□□□□ -0.73
TCF4-266ENST00000628689 GLTPD2A6NH11 291 aa10.48□□□□□ -0.73
TCF4-266ENST00000628689 POTECB2RU33 542 aa10.48□□□□□ -0.73
TCF4-266ENST00000628689 DCAF5Q96JK2 942 aa10.48□□□□□ -0.73
TCF4-266ENST00000628689 CFAP44Q96MT7 982 aa10.48□□□□□ -0.73
TCF4-266ENST00000628689 FBXO3Q9UK99 471 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms