RNA–Protein interactions for RNA: ENST00000628566.2

NR1I3-235, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 5 BASIC

Gene NR1I3, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-235ENST00000628566 PCDH11YQ9BZA8 1340 aa10.48□□□□□ -0.73
NR1I3-235ENST00000628566 FAM182BQ5T319 152 aa10.47□□□□□ -0.73
NR1I3-235ENST00000628566 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.47□□□□□ -0.73
NR1I3-235ENST00000628566 IGSF1Q8N6C5 1336 aa10.47□□□□□ -0.73
NR1I3-235ENST00000628566 BCL9O00512 1426 aa10.47□□□□□ -0.73
NR1I3-235ENST00000628566 RGPD2P0DJD1 1756 aa10.47□□□□□ -0.73
NR1I3-235ENST00000628566 TRIM37O94972 964 aa10.46□□□□□ -0.73
NR1I3-235ENST00000628566 PPP2R1AP30153 589 aa10.46□□□□□ -0.73
NR1I3-235ENST00000628566 AMOTQ4VCS5 1084 aa10.46□□□□□ -0.73
NR1I3-235ENST00000628566 MARCH10Q8NA82 808 aaPredicted RBP10.46□□□□□ -0.73
NR1I3-235ENST00000628566 PARD3Q8TEW0 1356 aa10.46□□□□□ -0.74
NR1I3-235ENST00000628566 NCAPD2Q15021 1401 aa10.46□□□□□ -0.74
NR1I3-235ENST00000628566 MEGF6O75095 1541 aa10.45□□□□□ -0.74
NR1I3-235ENST00000628566 U2SURPO15042 1029 aaKnown RBP10.45□□□□□ -0.74
NR1I3-235ENST00000628566 APBA3O96018 575 aa10.45□□□□□ -0.74
NR1I3-235ENST00000628566 NEFMP07197 916 aa10.45□□□□□ -0.74
NR1I3-235ENST00000628566 IL13P35225 146 aa10.45□□□□□ -0.74
NR1I3-235ENST00000628566 PLEKHO1Q53GL0 409 aaPredicted RBP10.45□□□□□ -0.74
NR1I3-235ENST00000628566 SULT6B1Q6IMI4 303 aa10.45□□□□□ -0.74
NR1I3-235ENST00000628566 BCL11BQ9C0K0 894 aaPredicted RBP10.45□□□□□ -0.74
NR1I3-235ENST00000628566 HSP90AB1P08238 724 aaKnown RBP10.44□□□□□ -0.74
NR1I3-235ENST00000628566 EP400Q96L91 3159 aa10.44□□□□□ -0.74
NR1I3-235ENST00000628566 MYBBP1AQ9BQG0 1328 aaKnown RBP10.43□□□□□ -0.74
NR1I3-235ENST00000628566 HMGB2P26583 209 aaKnown RBP10.43□□□□□ -0.74
NR1I3-235ENST00000628566 C1orf141Q5JVX7 400 aa10.43□□□□□ -0.74
NR1I3-235ENST00000628566 IFNL2Q8IZJ0 200 aa10.43□□□□□ -0.74
NR1I3-235ENST00000628566 PNNQ9H307 717 aaKnown RBP10.43□□□□□ -0.74
NR1I3-235ENST00000628566 KDRP35968 1356 aa10.42□□□□□ -0.74
NR1I3-235ENST00000628566 SYTL4Q96C24 671 aaPredicted RBP10.42□□□□□ -0.74
NR1I3-235ENST00000628566 PKD1L3Q7Z443 1732 aa10.41□□□□□ -0.74
NR1I3-235ENST00000628566 U2AF1L5P0DN76 240 aaPredicted RBP10.41□□□□□ -0.74
NR1I3-235ENST00000628566 U2AF1Q01081 240 aaKnown RBP eCLIP10.41□□□□□ -0.74
NR1I3-235ENST00000628566 ACSBG1Q96GR2 724 aa10.41□□□□□ -0.74
NR1I3-235ENST00000628566 NHSQ6T4R5 1651 aa10.41□□□□□ -0.74
NR1I3-235ENST00000628566 PLSCR1O15162 318 aa10.4□□□□□ -0.74
NR1I3-235ENST00000628566 ANP32CO43423 234 aa10.4□□□□□ -0.74
NR1I3-235ENST00000628566 HMOX1P09601 288 aa10.4□□□□□ -0.74
NR1I3-235ENST00000628566 ZNF530Q6P9A1 599 aaPredicted RBP10.4□□□□□ -0.74
NR1I3-235ENST00000628566 DEFB132Q7Z7B7 95 aa10.4□□□□□ -0.74
NR1I3-235ENST00000628566 TNS1Q9HBL0 1735 aaKnown RBP10.4□□□□□ -0.74
NR1I3-235ENST00000628566 COL3A1P02461 1466 aaPredicted RBP10.4□□□□□ -0.74
NR1I3-235ENST00000628566 SBF2Q86WG5 1849 aa10.4□□□□□ -0.75
NR1I3-235ENST00000628566 PHKG2P15735 406 aa10.39□□□□□ -0.75
NR1I3-235ENST00000628566 EN1Q05925 392 aaPredicted RBP10.39□□□□□ -0.75
NR1I3-235ENST00000628566 NKX1-1Q15270 411 aaPredicted RBP10.39□□□□□ -0.75
NR1I3-235ENST00000628566 NBPF14Q5TI25 921 aa10.39□□□□□ -0.75
NR1I3-235ENST00000628566 AEBP1Q8IUX7 1158 aa10.39□□□□□ -0.75
NR1I3-235ENST00000628566 GAS2L2Q8NHY3 880 aa10.39□□□□□ -0.75
NR1I3-235ENST00000628566 DCAF5Q96JK2 942 aa10.39□□□□□ -0.75
NR1I3-235ENST00000628566 PRKRIP1Q9H875 184 aaPredicted RBP10.39□□□□□ -0.75
NR1I3-235ENST00000628566 CYP27B1O15528 508 aa10.38□□□□□ -0.75
NR1I3-235ENST00000628566 FCHSD2O94868 740 aa10.38□□□□□ -0.75
NR1I3-235ENST00000628566 PRIM1P49642 420 aaKnown RBP10.38□□□□□ -0.75
NR1I3-235ENST00000628566 WDR43Q15061 677 aaKnown RBP eCLIP10.38□□□□□ -0.75
NR1I3-235ENST00000628566 AKAP4Q5JQC9 854 aa10.38□□□□□ -0.75
NR1I3-235ENST00000628566 TMOD3Q9NYL9 352 aa10.38□□□□□ -0.75
NR1I3-235ENST00000628566 RGPD3A6NKT7 1758 aaPredicted RBP10.38□□□□□ -0.75
NR1I3-235ENST00000628566 RGPD4Q7Z3J3 1758 aa10.38□□□□□ -0.75
NR1I3-235ENST00000628566 SHANK3Q9BYB0 1731 aa10.38□□□□□ -0.75
NR1I3-235ENST00000628566 KCNQ2O43526 872 aa10.37□□□□□ -0.75
NR1I3-235ENST00000628566 EZH2Q15910 746 aaKnown RBP10.37□□□□□ -0.75
NR1I3-235ENST00000628566 DOT1LQ8TEK3 1739 aa10.37□□□□□ -0.75
NR1I3-235ENST00000628566 SMARCC1Q92922 1105 aaPredicted RBP10.37□□□□□ -0.75
NR1I3-235ENST00000628566 CAMKK2Q96RR4 588 aa10.37□□□□□ -0.75
NR1I3-235ENST00000628566 MAPK8IP3Q9UPT6 1336 aa10.36□□□□□ -0.75
NR1I3-235ENST00000628566 ERVV-2B6SEH9 535 aa10.36□□□□□ -0.75
NR1I3-235ENST00000628566 PRKAR2BP31323 418 aa10.36□□□□□ -0.75
NR1I3-235ENST00000628566 SLC27A3Q5K4L6 730 aa10.36□□□□□ -0.75
NR1I3-235ENST00000628566 MPRIPQ6WCQ1 1025 aa10.36□□□□□ -0.75
NR1I3-235ENST00000628566 KAT6BQ8WYB5 2073 aa10.36□□□□□ -0.75
NR1I3-235ENST00000628566 CABP4P57796 275 aa10.35□□□□□ -0.75
NR1I3-235ENST00000628566 RTF1Q92541 710 aaKnown RBP10.35□□□□□ -0.75
NR1I3-235ENST00000628566 RSPH6AQ9H0K4 717 aa10.35□□□□□ -0.75
NR1I3-235ENST00000628566 BTAF1O14981 1849 aa10.35□□□□□ -0.75
NR1I3-235ENST00000628566 GNAT3A8MTJ3 354 aa10.34□□□□□ -0.75
NR1I3-235ENST00000628566 MTHFSDQ2M296 383 aaKnown RBP10.34□□□□□ -0.75
NR1I3-235ENST00000628566 TEFQ10587 303 aa10.33□□□□□ -0.76
NR1I3-235ENST00000628566 TXNRD1Q16881 649 aa10.33□□□□□ -0.76
NR1I3-235ENST00000628566 MAP3K5Q99683 1374 aa10.33□□□□□ -0.76
NR1I3-235ENST00000628566 RREB1Q92766 1687 aa10.32□□□□□ -0.76
NR1I3-235ENST00000628566 PTF1AQ7RTS3 328 aa10.32□□□□□ -0.76
NR1I3-235ENST00000628566 PIGBQ92521 554 aa10.32□□□□□ -0.76
NR1I3-235ENST00000628566 STK32BQ9NY57 414 aa10.32□□□□□ -0.76
NR1I3-235ENST00000628566 CCNL1Q9UK58 526 aaPredicted RBP10.32□□□□□ -0.76
NR1I3-235ENST00000628566 PALLDQ8WX93 1383 aa10.31□□□□□ -0.76
NR1I3-235ENST00000628566 HTATSF1O43719 755 aaKnown RBP10.31□□□□□ -0.76
NR1I3-235ENST00000628566 LMOD3Q0VAK6 560 aa10.31□□□□□ -0.76
NR1I3-235ENST00000628566 ITGB4P16144 1822 aa10.3□□□□□ -0.76
NR1I3-235ENST00000628566 RNMTO43148 476 aaKnown RBP10.3□□□□□ -0.76
NR1I3-235ENST00000628566 TTC5Q8N0Z6 440 aa10.3□□□□□ -0.76
NR1I3-235ENST00000628566 SLC52A2Q9HAB3 445 aa10.3□□□□□ -0.76
NR1I3-235ENST00000628566 KDM6AO15550 1401 aaPredicted RBP10.3□□□□□ -0.76
NR1I3-235ENST00000628566 NUP188Q5SRE5 1749 aa10.3□□□□□ -0.76
NR1I3-235ENST00000628566 TOGARAM1Q9Y4F4 1720 aa10.3□□□□□ -0.76
NR1I3-235ENST00000628566 NFATC2IPQ8NCF5 419 aa10.29□□□□□ -0.76
NR1I3-235ENST00000628566 RUNDC1Q96C34 613 aa10.29□□□□□ -0.76
NR1I3-235ENST00000628566 PHACTR3Q96KR7 559 aa10.29□□□□□ -0.76
NR1I3-235ENST00000628566 MRS2Q9HD23 443 aa10.29□□□□□ -0.76
NR1I3-235ENST00000628566 SCN11AQ9UI33 1791 aa10.29□□□□□ -0.76
NR1I3-235ENST00000628566 LY75O60449 1722 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms