RNA–Protein interactions for RNA: ENST00000628293.1

CCDC163-204, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 1,076 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-204ENST00000628293 IL2RBP14784 551 aa10.74□□□□□ -0.69
CCDC163-204ENST00000628293 EIF4A2Q14240 407 aaKnown RBP10.74□□□□□ -0.69
CCDC163-204ENST00000628293 DDB1Q16531 1140 aa10.74□□□□□ -0.69
CCDC163-204ENST00000628293 USHBP1Q8N6Y0 703 aa10.74□□□□□ -0.69
CCDC163-204ENST00000628293 MARCH10Q8NA82 808 aaPredicted RBP10.74□□□□□ -0.69
CCDC163-204ENST00000628293 BTAF1O14981 1849 aa10.73□□□□□ -0.69
CCDC163-204ENST00000628293 VIRMAQ69YN4 1812 aaKnown RBP10.73□□□□□ -0.69
CCDC163-204ENST00000628293 EYA1Q99502 592 aa10.73□□□□□ -0.69
CCDC163-204ENST00000628293 KAT6BQ8WYB5 2073 aa10.72□□□□□ -0.69
CCDC163-204ENST00000628293 PDE3BQ13370 1112 aa10.72□□□□□ -0.69
CCDC163-204ENST00000628293 IGSF1Q8N6C5 1336 aa10.72□□□□□ -0.69
CCDC163-204ENST00000628293 PARD3Q8TEW0 1356 aa10.72□□□□□ -0.69
CCDC163-204ENST00000628293 NUP188Q5SRE5 1749 aa10.72□□□□□ -0.69
CCDC163-204ENST00000628293 ITGB4P16144 1822 aa10.72□□□□□ -0.69
CCDC163-204ENST00000628293 MTHFSP49914 203 aa10.71□□□□□ -0.69
CCDC163-204ENST00000628293 FAM196AQ6ZSG2 479 aa10.71□□□□□ -0.69
CCDC163-204ENST00000628293 KDRP35968 1356 aa10.7□□□□□ -0.7
CCDC163-204ENST00000628293 EXOC5O00471 708 aa10.7□□□□□ -0.7
CCDC163-204ENST00000628293 IL13P35225 146 aa10.7□□□□□ -0.7
CCDC163-204ENST00000628293 CNGB1Q14028 1251 aaPredicted RBP10.7□□□□□ -0.7
CCDC163-204ENST00000628293 TRIM37O94972 964 aa10.69□□□□□ -0.7
CCDC163-204ENST00000628293 DDX10Q13206 875 aaKnown RBP10.69□□□□□ -0.7
CCDC163-204ENST00000628293 PTF1AQ7RTS3 328 aa10.69□□□□□ -0.7
CCDC163-204ENST00000628293 DEFB132Q7Z7B7 95 aa10.69□□□□□ -0.7
CCDC163-204ENST00000628293 CCDC125Q86Z20 511 aa10.69□□□□□ -0.7
CCDC163-204ENST00000628293 PLEKHG2Q9H7P9 1386 aa10.68□□□□□ -0.7
CCDC163-204ENST00000628293 LY75O60449 1722 aa10.68□□□□□ -0.7
CCDC163-204ENST00000628293 PPP2R1AP30153 589 aa10.68□□□□□ -0.7
CCDC163-204ENST00000628293 AEBP1Q8IUX7 1158 aa10.68□□□□□ -0.7
CCDC163-204ENST00000628293 SCN11AQ9UI33 1791 aa10.67□□□□□ -0.7
CCDC163-204ENST00000628293 ZCRB1Q8TBF4 217 aaKnown RBP10.67□□□□□ -0.7
CCDC163-204ENST00000628293 RAPGEF4Q8WZA2 1011 aa10.67□□□□□ -0.7
CCDC163-204ENST00000628293 ADAMTS7Q9UKP4 1686 aa10.66□□□□□ -0.7
CCDC163-204ENST00000628293 CYP27B1O15528 508 aa10.66□□□□□ -0.7
CCDC163-204ENST00000628293 TATP17735 454 aaPredicted RBP10.66□□□□□ -0.7
CCDC163-204ENST00000628293 HOXD11P31277 338 aaPredicted RBP10.66□□□□□ -0.7
CCDC163-204ENST00000628293 KCNQ2O43526 872 aa10.65□□□□□ -0.7
CCDC163-204ENST00000628293 PAPPAQ13219 1627 aa10.65□□□□□ -0.7
CCDC163-204ENST00000628293 PCDH11XQ9BZA7 1347 aa10.64□□□□□ -0.71
CCDC163-204ENST00000628293 PCDH11YQ9BZA8 1340 aa10.64□□□□□ -0.71
CCDC163-204ENST00000628293 ZNF316A6NFI3 1004 aaPredicted RBP10.64□□□□□ -0.71
CCDC163-204ENST00000628293 DIAPH1O60610 1272 aaKnown RBP10.64□□□□□ -0.71
CCDC163-204ENST00000628293 EN1Q05925 392 aaPredicted RBP10.64□□□□□ -0.71
CCDC163-204ENST00000628293 DDX54Q8TDD1 881 aaKnown RBP10.64□□□□□ -0.71
CCDC163-204ENST00000628293 CAMKK2Q96RR4 588 aa10.64□□□□□ -0.71
CCDC163-204ENST00000628293 BCL11BQ9C0K0 894 aaPredicted RBP10.64□□□□□ -0.71
CCDC163-204ENST00000628293 TAF1LQ8IZX4 1826 aa10.63□□□□□ -0.71
CCDC163-204ENST00000628293 DLG5Q8TDM6 1919 aa10.63□□□□□ -0.71
CCDC163-204ENST00000628293 BAG6P46379 1132 aa10.63□□□□□ -0.71
CCDC163-204ENST00000628293 SF3B2Q13435 895 aaKnown RBP10.63□□□□□ -0.71
CCDC163-204ENST00000628293 SULT6B1Q6IMI4 303 aa10.63□□□□□ -0.71
CCDC163-204ENST00000628293 ACSBG1Q96GR2 724 aa10.63□□□□□ -0.71
CCDC163-204ENST00000628293 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.63□□□□□ -0.71
CCDC163-204ENST00000628293 KDM6AO15550 1401 aaPredicted RBP10.63□□□□□ -0.71
CCDC163-204ENST00000628293 TUBGCP6Q96RT7 1819 aa10.63□□□□□ -0.71
CCDC163-204ENST00000628293 SIPA1L3O60292 1781 aaPredicted RBP10.62□□□□□ -0.71
CCDC163-204ENST00000628293 APBA3O96018 575 aa10.62□□□□□ -0.71
CCDC163-204ENST00000628293 NKX1-1Q15270 411 aaPredicted RBP10.62□□□□□ -0.71
CCDC163-204ENST00000628293 EZH2Q15910 746 aaKnown RBP10.62□□□□□ -0.71
CCDC163-204ENST00000628293 RNF216Q9NWF9 866 aaPredicted RBP10.62□□□□□ -0.71
CCDC163-204ENST00000628293 SRCAPQ6ZRS2 3230 aa10.61□□□□□ -0.71
CCDC163-204ENST00000628293 HMOX1P09601 288 aa10.61□□□□□ -0.71
CCDC163-204ENST00000628293 PHKG2P15735 406 aa10.61□□□□□ -0.71
CCDC163-204ENST00000628293 RALBP1Q15311 655 aa10.61□□□□□ -0.71
CCDC163-204ENST00000628293 SPG7Q9UQ90 795 aa10.61□□□□□ -0.71
CCDC163-204ENST00000628293 PLSCR1O15162 318 aa10.6□□□□□ -0.71
CCDC163-204ENST00000628293 PROM2Q8N271 834 aa10.6□□□□□ -0.71
CCDC163-204ENST00000628293 QSER1Q2KHR3 1735 aa10.6□□□□□ -0.71
CCDC163-204ENST00000628293 MRC1P22897 1456 aa10.6□□□□□ -0.71
CCDC163-204ENST00000628293 C5P01031 1676 aa10.6□□□□□ -0.71
CCDC163-204ENST00000628293 CASZ1Q86V15 1759 aa10.6□□□□□ -0.71
CCDC163-204ENST00000628293 PRIM1P49642 420 aaKnown RBP10.59□□□□□ -0.71
CCDC163-204ENST00000628293 C1QBPQ07021 282 aaKnown RBP10.59□□□□□ -0.71
CCDC163-204ENST00000628293 CFAP53Q96M91 514 aa10.59□□□□□ -0.71
CCDC163-204ENST00000628293 RSPH6AQ9H0K4 717 aa10.59□□□□□ -0.71
CCDC163-204ENST00000628293 PRKRIP1Q9H875 184 aaPredicted RBP10.59□□□□□ -0.71
CCDC163-204ENST00000628293 MYBBP1AQ9BQG0 1328 aaKnown RBP10.58□□□□□ -0.71
CCDC163-204ENST00000628293 ZNF831Q5JPB2 1677 aa10.58□□□□□ -0.72
CCDC163-204ENST00000628293 U2SURPO15042 1029 aaKnown RBP10.58□□□□□ -0.72
CCDC163-204ENST00000628293 AMOTQ4VCS5 1084 aa10.58□□□□□ -0.72
CCDC163-204ENST00000628293 PLEKHO1Q53GL0 409 aaPredicted RBP10.58□□□□□ -0.72
CCDC163-204ENST00000628293 ZNF530Q6P9A1 599 aaPredicted RBP10.58□□□□□ -0.72
CCDC163-204ENST00000628293 IFNL2Q8IZJ0 200 aa10.58□□□□□ -0.72
CCDC163-204ENST00000628293 CICQ96RK0 1608 aaPredicted RBP10.58□□□□□ -0.72
CCDC163-204ENST00000628293 UBR2Q8IWV8 1755 aa10.57□□□□□ -0.72
CCDC163-204ENST00000628293 COL5A3P25940 1745 aaPredicted RBP10.57□□□□□ -0.72
CCDC163-204ENST00000628293 TXNRD1Q16881 649 aa10.56□□□□□ -0.72
CCDC163-204ENST00000628293 MTHFSDQ2M296 383 aaKnown RBP10.56□□□□□ -0.72
CCDC163-204ENST00000628293 SYTL4Q96C24 671 aaPredicted RBP10.56□□□□□ -0.72
CCDC163-204ENST00000628293 ANO8Q9HCE9 1232 aaPredicted RBP10.56□□□□□ -0.72
CCDC163-204ENST00000628293 TJP1Q07157 1748 aa10.55□□□□□ -0.72
CCDC163-204ENST00000628293 PRKAR2BP31323 418 aa10.55□□□□□ -0.72
CCDC163-204ENST00000628293 PIGBQ92521 554 aa10.55□□□□□ -0.72
CCDC163-204ENST00000628293 PHACTR3Q96KR7 559 aa10.55□□□□□ -0.72
CCDC163-204ENST00000628293 LRRC4BQ9NT99 713 aa10.55□□□□□ -0.72
CCDC163-204ENST00000628293 UBR3Q6ZT12 1888 aa10.55□□□□□ -0.72
CCDC163-204ENST00000628293 C4BP0C0L5 1744 aa10.54□□□□□ -0.72
CCDC163-204ENST00000628293 U2AF1L5P0DN76 240 aaPredicted RBP10.54□□□□□ -0.72
CCDC163-204ENST00000628293 U2AF1Q01081 240 aaKnown RBP eCLIP10.54□□□□□ -0.72
CCDC163-204ENST00000628293 MPRIPQ6WCQ1 1025 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms