RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 SLFN5Q08AF3 891 aa15.13■□□□□ 0.01
SCN8A-209ENST00000627620 PPFIBP1Q86W92 1011 aa15.13■□□□□ 0.01
SCN8A-209ENST00000627620 BICDL1Q6ZP65 573 aa15.13■□□□□ 0.01
SCN8A-209ENST00000627620 PRXQ9BXM0 1461 aa15.13■□□□□ 0.01
SCN8A-209ENST00000627620 NUTM1Q86Y26 1132 aa15.13■□□□□ 0.01
SCN8A-209ENST00000627620 SPATA32Q96LK8 384 aa15.13■□□□□ 0.01
SCN8A-209ENST00000627620 SPINK5Q9NQ38 1064 aaPredicted RBP15.13■□□□□ 0.01
SCN8A-209ENST00000627620 POGZQ7Z3K3 1410 aa15.13■□□□□ 0.01
SCN8A-209ENST00000627620 KRT32Q14532 448 aa15.13■□□□□ 0.01
SCN8A-209ENST00000627620 SKIDA1Q1XH10 827 aa15.13■□□□□ 0.01
SCN8A-209ENST00000627620 LRP2BPQ9P2M1 347 aa15.13■□□□□ 0.01
SCN8A-209ENST00000627620 TOPBP1Q92547 1522 aa15.13■□□□□ 0.01
SCN8A-209ENST00000627620 TIAM1Q13009 1591 aa15.12■□□□□ 0.01
SCN8A-209ENST00000627620 KCNH5Q8NCM2 988 aa15.12■□□□□ 0.01
SCN8A-209ENST00000627620 IGHMBP2P38935 993 aaKnown RBP15.12■□□□□ 0.01
SCN8A-209ENST00000627620 IDH1O75874 414 aaKnown RBP15.12■□□□□ 0.01
SCN8A-209ENST00000627620 MCM10Q7L590 875 aa15.12■□□□□ 0.01
SCN8A-209ENST00000627620 THUMPD2Q9BTF0 503 aaKnown RBP15.12■□□□□ 0.01
SCN8A-209ENST00000627620 TANGO6Q9C0B7 1094 aa15.12■□□□□ 0.01
SCN8A-209ENST00000627620 EXOC6BQ9Y2D4 811 aa15.12■□□□□ 0.01
SCN8A-209ENST00000627620 DUSP27Q5VZP5 1158 aa15.11■□□□□ 0.01
SCN8A-209ENST00000627620 DCAF8L1A6NGE4 600 aa15.11■□□□□ 0.01
SCN8A-209ENST00000627620 PDCL3Q9H2J4 239 aa15.11■□□□□ 0.01
SCN8A-209ENST00000627620 NOM1Q5C9Z4 860 aaKnown RBP15.11■□□□□ 0.01
SCN8A-209ENST00000627620 ZSCAN29Q8IWY8 852 aaPredicted RBP15.11■□□□□ 0.01
SCN8A-209ENST00000627620 POLA1P09884 1462 aaPredicted RBP15.11■□□□□ 0.01
SCN8A-209ENST00000627620 STARD3NLO95772 234 aa15.11■□□□□ 0.01
SCN8A-209ENST00000627620 DHX8Q14562 1220 aaKnown RBP15.11■□□□□ 0.01
SCN8A-209ENST00000627620 DEF6Q9H4E7 631 aa15.11■□□□□ 0.01
SCN8A-209ENST00000627620 CFAP45Q9UL16 551 aa15.11■□□□□ 0.01
SCN8A-209ENST00000627620 WAPLQ7Z5K2 1190 aa15.1■□□□□ 0.01
SCN8A-209ENST00000627620 PPP6R1Q9UPN7 881 aa15.1■□□□□ 0.01
SCN8A-209ENST00000627620 DCTN1Q14203 1278 aa15.1■□□□□ 0.01
SCN8A-209ENST00000627620 MTERF4Q7Z6M4 381 aaKnown RBP15.1■□□□□ 0.01
SCN8A-209ENST00000627620 SUPT6HQ7KZ85 1726 aaKnown RBP15.1■□□□□ 0.01
SCN8A-209ENST00000627620 HMGN5P82970 282 aaKnown RBP15.1■□□□□ 0.01
SCN8A-209ENST00000627620 PIP4K2BP78356 416 aa15.1■□□□□ 0.01
SCN8A-209ENST00000627620 MPNDQ8N594 471 aa15.1■□□□□ 0.01
SCN8A-209ENST00000627620 AIDAQ96BJ3 306 aa15.1■□□□□ 0.01
SCN8A-209ENST00000627620 BRPF3Q9ULD4 1205 aa15.1■□□□□ 0.01
SCN8A-209ENST00000627620 LUC7LQ9NQ29 371 aaKnown RBP15.09■□□□□ 0.01
SCN8A-209ENST00000627620 IMMTQ16891 758 aaKnown RBP15.09■□□□□ 0.01
SCN8A-209ENST00000627620 SSBP05455 408 aaKnown RBP eCLIP15.09■□□□□ 0.01
SCN8A-209ENST00000627620 CASTP20810 708 aaKnown RBP15.09■□□□□ 0.01
SCN8A-209ENST00000627620 METTL24Q5JXM2 366 aa15.08■□□□□ 0.01
SCN8A-209ENST00000627620 PAF1Q8N7H5 531 aa15.08■□□□□ 0.01
SCN8A-209ENST00000627620 KIF1BPQ96EK5 621 aa15.08■□□□□ 0.01
SCN8A-209ENST00000627620 CBFA2T2O43439 604 aa15.08■□□□□ 0
SCN8A-209ENST00000627620 MAP7D2Q96T17 732 aa15.08■□□□□ 0
SCN8A-209ENST00000627620 BMP2KQ9NSY1 1161 aaPredicted RBP15.08■□□□□ 0
SCN8A-209ENST00000627620 ABCF2Q9UG63 623 aa15.08■□□□□ 0
SCN8A-209ENST00000627620 PIBF1Q8WXW3 757 aa15.08■□□□□ 0
SCN8A-209ENST00000627620 NUP62CLQ9H1M0 184 aa15.08■□□□□ 0
SCN8A-209ENST00000627620 CIZ1Q9ULV3 898 aaPredicted RBP15.08■□□□□ 0
SCN8A-209ENST00000627620 PTCD1O75127 700 aaKnown RBP15.07■□□□□ 0
SCN8A-209ENST00000627620 WASF1Q92558 559 aa15.07■□□□□ 0
SCN8A-209ENST00000627620 GRPEL1Q9HAV7 217 aa15.07■□□□□ 0
SCN8A-209ENST00000627620 MX1P20591 662 aa15.07■□□□□ 0
SCN8A-209ENST00000627620 CDK13Q14004 1512 aaKnown RBP15.07■□□□□ 0
SCN8A-209ENST00000627620 TOP2BQ02880 1626 aa15.07■□□□□ 0
SCN8A-209ENST00000627620 CEP57L1Q8IYX8 460 aa15.07■□□□□ 0
SCN8A-209ENST00000627620 DDX11Q96FC9 970 aa15.07■□□□□ 0
SCN8A-209ENST00000627620 AXDND1Q5T1B0 1012 aaPredicted RBP15.07■□□□□ 0
SCN8A-209ENST00000627620 WDR97A6NE52 1622 aa15.06■□□□□ 0
SCN8A-209ENST00000627620 H0YHG0 523 aa15.06■□□□□ 0
SCN8A-209ENST00000627620 LARP1Q6PKG0 1096 aaKnown RBP15.06■□□□□ 0
SCN8A-209ENST00000627620 RAB11FIP3O75154 756 aa15.06■□□□□ 0
SCN8A-209ENST00000627620 GLRX3O76003 335 aaKnown RBP15.06■□□□□ 0
SCN8A-209ENST00000627620 CCDC181Q5TID7 509 aa15.06■□□□□ 0
SCN8A-209ENST00000627620 AKAP2Q9Y2D5 859 aa15.06■□□□□ 0
SCN8A-209ENST00000627620 SMARCA5O60264 1052 aaPredicted RBP15.05■□□□□ 0
SCN8A-209ENST00000627620 ERLIN2O94905 339 aa15.05■□□□□ 0
SCN8A-209ENST00000627620 TMOD3Q9NYL9 352 aa15.05■□□□□ 0
SCN8A-209ENST00000627620 CWC15Q9P013 229 aaKnown RBP15.05■□□□□ 0
SCN8A-209ENST00000627620 TAF7Q15545 349 aaPredicted RBP15.05■□□□□ -0
SCN8A-209ENST00000627620 FAM177A1Q8N128 213 aaPredicted RBP15.05■□□□□ -0
SCN8A-209ENST00000627620 TXLNBQ8N3L3 684 aa15.05■□□□□ -0
SCN8A-209ENST00000627620 EPRSP07814 1512 aaKnown RBP15.05■□□□□ -0
SCN8A-209ENST00000627620 ZNF76P36508 570 aa15.05■□□□□ -0
SCN8A-209ENST00000627620 SSH1Q8WYL5 1049 aa15.05■□□□□ -0
SCN8A-209ENST00000627620 MYD88Q99836 296 aa15.05■□□□□ -0
SCN8A-209ENST00000627620 UPF3BQ9BZI7 483 aaKnown RBP15.05■□□□□ -0
SCN8A-209ENST00000627620 NME9Q86XW9 330 aa15.05■□□□□ -0
SCN8A-209ENST00000627620 USHBP1Q8N6Y0 703 aa15.05■□□□□ -0
SCN8A-209ENST00000627620 USP5P45974 858 aa15.04■□□□□ -0
SCN8A-209ENST00000627620 NAIPQ13075 1403 aa15.04■□□□□ -0
SCN8A-209ENST00000627620 MCM4P33991 863 aa15.04■□□□□ -0
SCN8A-209ENST00000627620 PDIA4P13667 645 aaKnown RBP15.04■□□□□ -0
SCN8A-209ENST00000627620 ALDH1L2Q3SY69 923 aa15.04■□□□□ -0
SCN8A-209ENST00000627620 CCDC112Q8NEF3 446 aa15.04■□□□□ -0
SCN8A-209ENST00000627620 U3KPZ7 1027 aaPredicted RBP15.04■□□□□ -0
SCN8A-209ENST00000627620 CCDC141Q6ZP82 1450 aa15.04■□□□□ -0
SCN8A-209ENST00000627620 PRPF40BQ6NWY9 871 aaKnown RBP15.04■□□□□ -0
SCN8A-209ENST00000627620 ARHGEF11O15085 1522 aa15.04■□□□□ -0
SCN8A-209ENST00000627620 BOLA2Q9H3K6 86 aa15.03■□□□□ -0
SCN8A-209ENST00000627620 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.03■□□□□ -0
SCN8A-209ENST00000627620 RARSP54136 660 aaKnown RBP15.03■□□□□ -0
SCN8A-209ENST00000627620 ZNF652Q9Y2D9 606 aa15.03■□□□□ -0
SCN8A-209ENST00000627620 AMOTQ4VCS5 1084 aa15.03■□□□□ -0
SCN8A-209ENST00000627620 CCDC83Q8IWF9 413 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms